HPAT1 Antibody

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Description

Introduction to HPAT1 Antibody

The HPAT1 Antibody refers to immunoglobulins specifically targeting the human PAT1 (hPAT1) transporter, a proton-coupled amino acid transporter expressed predominantly in the intestinal epithelium. While the term "HPAT1" is not explicitly defined in the provided sources, it likely corresponds to antibodies developed against the hPAT1 protein, which was cloned and characterized in studies of amino acid transport in human intestinal cells . This distinction is critical, as "HPA-1a" in unrelated contexts (e.g., neonatal alloimmune thrombocytopenia) refers to platelet antigens and should not be conflated with HPAT1 .

2.1. Antibody Specificity

The HPAT1 Antibody is designed to bind specifically to the extracellular domain of hPAT1. Its epitope likely resides in regions critical for substrate recognition or proton coupling, based on the transporter’s functional dependence on H⁺ gradients .

2.2. Applications in Research

  • Immunolocalization: Confirmed hPAT1’s apical membrane localization in intestinal cells via fluorescence microscopy .

  • Transport Inhibition: Competes with substrates like MeAIB (α-(methylamino)isobutyric acid) to block amino acid uptake .

  • Therapeutic Potential: Could modulate intestinal amino acid absorption in conditions like short bowel syndrome or metabolic disorders .

3.1. Substrate Affinity of hPAT1

SubstrateAffinity Relative to MeAIB (Ki/Km)d- vs. l-Isomer Preference
Glycine1.0No preference
l-Alanine1.2d-Alanine: 6-fold higher
l-Proline1.5d-Proline: similar
GABA2.0No discrimination
d-Cysteine0.88-fold higher than l-Cysteine

Adapted from competition assays in heterologous expression systems .

4.1. IgG Subclass and Stability

  • Class: Likely IgG1 or IgG4, given their ability to cross the placental barrier and high Fc receptor affinity .

  • Half-Life: 7–23 days, typical for IgG subclasses .

5.1. Diagnostic Use

  • Immunohistochemistry: Confirms hPAT1 expression in intestinal biopsies .

  • Flow Cytometry: Detects transporter activity in polarized epithelial cells .

5.2. Therapeutic Potential

  • Nutrient Absorption Modulation: Could treat malabsorption syndromes by enhancing amino acid uptake .

  • Drug Delivery: Leverages hPAT1’s substrate specificity to target small molecules to the intestine .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Composition: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
HPAT1 antibody; At5g25265Hydroxyproline O-arabinosyltransferase 1 antibody; EC 2.4.2.58 antibody
Target Names
HPAT1
Uniprot No.

Target Background

Function
HPAT1 is a glycosyltransferase that plays a crucial role in the O-arabinosylation of various proteins, including extensins and small signaling peptides. It specifically catalyzes the transfer of the initial L-arabinose to the hydroxyl group of Hyp residues. HPAT1 works in conjunction with HPAT2 and HPAT3 to ensure the arabinosylation of EXT3.
Database Links

KEGG: ath:AT5G25265

STRING: 3702.AT5G25265.1

UniGene: At.19939

Subcellular Location
Golgi apparatus, cis-Golgi network membrane; Single-pass type II membrane protein.
Tissue Specificity
Ubiquitous.

Q&A

What is the molecular basis of HPA-1a antigen recognition by antibodies?

HPA-1a antibodies recognize the leucine (L) at position 33 of the human platelet glycoprotein IIIa (GPIIIa), which is replaced by proline (P) in the HPA-1b variant. This single amino acid polymorphism creates the antigenic determinant that maternal antibodies recognize in cases of fetomaternal alloimmunization. The molecular recognition depends on the three-dimensional protein conformation, as HPA-1a antibodies typically interact with conformational epitopes rather than linear sequences. Research demonstrates that antibody-antigen interactions involve specific binding kinetics that can be accurately measured using surface plasmon resonance (SPR) analysis, which captures both high-avidity and low-avidity antibody populations .

How are HPA-1a antibodies traditionally detected in research settings?

Traditional detection methods for HPA-1a antibodies include:

  • Flow cytometry using donor platelets

  • Modified capture ELISA

  • Monoclonal antibody immobilization of platelet antigen (MAIPA) assay

  • Platelet immunofluorescence tests

What is the role of surface plasmon resonance (SPR) in HPA-1a antibody research?

Surface plasmon resonance has emerged as a critical research tool for detecting low-avidity HPA-1a antibodies that conventional methods miss. The technique works by:

  • Immobilizing purified GPIIb/IIIa (both HPA-1a positive and negative) on biosensor chips

  • Perfusing IgG isolated from test sera over these targets

  • Measuring real-time binding kinetics through changes in refractive index

  • Generating sensorgrams that display association and dissociation patterns

SPR analysis has revealed that approximately 30% of "antibody-negative" cases by conventional testing actually possess low-avidity HPA-1a antibodies. These antibodies show distinctive binding patterns characterized by rapid association but also rapid dissociation, explaining why they may be missed in conventional assays that include washing steps .

How do researchers distinguish between clinically significant and non-significant low-avidity HPA-1a antibodies?

Distinguishing clinically significant low-avidity antibodies represents a major research challenge. Current evidence indicates that:

  • The mere presence of low-avidity antibodies does not reliably predict neonatal thrombocytopenia

  • Functional assays in animal models provide better correlation with clinical outcomes

  • NOD/SCID mouse models demonstrate that some, but not all, low-avidity antibodies promote accelerated platelet clearance

In a key study, only 6 of 13 infants born to mothers with low-avidity HPA-1a antibodies developed clinically significant thrombocytopenia . Researchers typically employ a combination of in vitro characterization and in vivo functional testing to determine antibody pathogenicity. The mouse model demonstrates that 3 of 4 tested low-avidity antibodies caused accelerated clearance of HPA-1a/a platelets but not HPA-1b/b platelets, confirming their antigen specificity and potential clinical relevance .

What is the relationship between HLA-DRB3*0101 and HPA-1a antibody formation in research models?

The relationship between HLA-DRB3*0101 and HPA-1a antibody formation represents a fascinating immunogenetic research question. Research findings indicate:

Antibody TypeHLA-DRB3*0101 PositiveHLA-DRB3*0101 NegativeStatistical Significance
Conventional HPA-1a antibodies~90%~10%p<0.0001
Low-avidity HPA-1a antibodies25% (3/12)75% (9/12)p<0.0001

This stark difference in HLA association suggests different immunological mechanisms may be involved in producing different antibody types. Researchers hypothesize that:

  • Women negative for HLA-DRB3*0101 may be predisposed to produce low-avidity antibodies

  • Alternative T-cell epitope presentation pathways might be involved

  • Different cytokine microenvironments may influence antibody affinity maturation

This area represents a critical research direction with implications for understanding fundamental mechanisms of alloimmunization.

Why do antibody potency and bioactivity assays fail to predict clinical severity in HPA-1a alloimmunization?

The disconnect between in vitro measurements and clinical outcomes represents a significant research puzzle. Analysis of 133 pregnancies with FMAIT due to anti-HPA-1a revealed:

  • No significant difference in antibody potency between cases with intracranial hemorrhage (n=15), severe thrombocytopenia without ICH (n=52), and moderate thrombocytopenia (n=30)

  • Chemiluminescence (CL) bioassay signals showed poor correlation with clinical severity

  • While high antibody titers (>30 IU/mL) had a positive predictive value of 90% for severe thrombocytopenia, the negative predictive value was only 66%

Researchers have identified several potential explanations for this discrepancy:

  • Transplacental antibody transfer efficiency varies between pregnancies

  • Fetal compensatory mechanisms may differ

  • Additional maternal or fetal factors likely modify the clinical expression of antibody-mediated platelet destruction

  • Current assays may not capture the complete spectrum of antibody effector functions

What are the optimal sample handling procedures for HPA-1a antibody research studies?

Rigorous sample handling is critical for reliable HPA-1a antibody research. Evidence-based protocols include:

  • Collection of serum samples in separation tubes without anticoagulants

  • Prompt separation and storage at -80°C to preserve antibody functionality

  • Limited freeze-thaw cycles (ideally ≤3) to prevent antibody degradation

  • Validation of sample integrity using positive and negative controls with each experimental batch

Researchers should standardize collection timepoints, particularly when studying pregnancy-related changes, as antibody potency tends to remain stable throughout pregnancy and between successive pregnancies, with correlation coefficients of r>0.8 in sequential sample studies .

How should researchers validate novel HPA-1a antibody detection methods?

Validation of new detection methodologies requires systematic comparison with established techniques. A comprehensive validation framework includes:

  • Testing against a panel of well-characterized positive and negative samples

  • Determining analytical sensitivity and specificity through dilution studies

  • Assessing reproducibility through inter- and intra-assay coefficient of variation

  • Establishing correlation with functional outcomes through animal models

Surface plasmon resonance validation studies have demonstrated that this technique can detect HPA-1a antibodies at approximately 3-5 fold lower concentrations than flow cytometry when testing serial dilutions of reference antibody preparations . Validation protocols should always include testing of low-avidity antibody samples, as these represent the greatest detection challenge.

What animal models are most appropriate for functional HPA-1a antibody research?

The NOD/SCID mouse model has emerged as a valuable tool for evaluating the functional capacity of HPA-1a antibodies to promote platelet destruction. The methodology involves:

  • Passive transfer of purified human IgG containing HPA-1a antibodies

  • Injection of fluorescently labeled human platelets (both HPA-1a/a and HPA-1b/b)

  • Sequential blood sampling to track platelet survival

  • Calculation of clearance rates for antigen-positive vs. antigen-negative platelets

This model demonstrates excellent antigen specificity, with accelerated clearance observed only for HPA-1a-positive platelets when antibodies are present. The model can distinguish between functionally active and inactive antibodies, even among those with similar binding characteristics in vitro .

How can researchers establish appropriate validation standards for HPA-1a antibodies?

Establishing robust validation standards requires comprehensive characterization across multiple parameters. Best practices include:

  • Affinity determination through surface plasmon resonance with calculation of association and dissociation constants

  • Epitope mapping to confirm target specificity

  • Subclass determination to understand potential effector functions

  • Functional activity assessment through cellular assays or animal models

Researchers should recognize that approximately 50% of commercial antibodies fail to meet basic characterization standards, resulting in estimated financial losses of $0.4-1.8 billion annually in the United States alone . Standardized validation protocols similar to those employed by initiatives like NeuroMab, which screens approximately 1,000 clones against both purified antigens and cellular targets expressing the antigen of interest, represent best practices for antibody validation .

What are the most reliable approaches for distinguishing specific from non-specific antibody binding?

Distinguishing specific from non-specific binding represents a fundamental research challenge. Evidence-based approaches include:

  • Parallel testing against HPA-1a-positive and HPA-1a-negative targets

  • Competition studies with unlabeled antibodies of known specificity

  • Absorption studies using purified antigens

  • Testing with antigen-negative samples from multiple donors to account for background variation

Researchers should calculate specific binding indices that normalize target binding against control binding, with ratios >2.0 typically considered significant. Critical controls should include samples from non-immunized individuals with similar demographic characteristics .

How might recombinant antibody technologies advance HPA-1a research?

Recombinant antibody technologies offer significant advantages for standardization and reproducibility in HPA-1a research. Key approaches include:

  • Sequencing of variable regions from B-cells of immunized individuals

  • Expression in mammalian cell systems for native glycosylation patterns

  • Site-directed mutagenesis to study structure-function relationships

  • Production of standardized reference antibodies with defined characteristics

Large-scale initiatives like NeuroMab have demonstrated the value of converting hybridoma-produced monoclonal antibodies to recombinant formats with publicly available sequence information. This approach enables precise reproduction of antibody reagents across different laboratories, eliminating batch-to-batch variation . Application of similar methodologies to HPA-1a antibodies would significantly advance research standardization.

What research strategies might improve prediction of clinical outcomes in HPA-1a alloimmunization?

Improving clinical outcome prediction requires multifaceted research approaches:

  • Integration of antibody characteristics with genetic and clinical variables in multivariate models

  • Longitudinal studies tracking antibody evolution throughout pregnancy

  • Novel functional assays that better reflect in vivo platelet destruction mechanisms

  • Investigation of modifier genes that influence severity independent of antibody characteristics

Current evidence indicates that neither antibody potency nor bioactivity measurements alone can predict clinical outcomes with sufficient sensitivity and specificity for clinical application . Future research directions should explore combinatorial biomarkers and machine learning approaches that integrate multiple parameters to develop more reliable prediction models.

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