FAE1 Antibody

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Description

FAT1 Antibody (Atypical Cadherin FAT1)

  • Target: FAT1 (FAT atypical cadherin 1), a transmembrane protein involved in cell adhesion and cancer progression.

  • Key Antibody: mAb198.3, a monoclonal antibody targeting FAT1 in colorectal cancer (CRC).

    • Specificity: Recognizes FAT1 extracellular domains with high affinity, showing cross-reactivity across species (human, bovine) .

    • Clinical Relevance:

      ParameterFindings
      Expression in CRC93% of CRC samples showed FAT1 positivity; 47% with moderate/strong staining .
      Functional RoleInhibits cancer invasiveness in vitro; reduces tumor growth in xenografts .
      Therapeutic PotentialEffective against KRAS/BRAF-mutant CRC resistant to EGFR-targeted therapies .

FADS1 Antibody (Fatty Acid Desaturase 1)

  • Target: FADS1, a front-end fatty acyl-CoA desaturase involved in lipid metabolism.

  • Key Antibodies:

    • Cell Signaling Technology #10076: Rabbit monoclonal antibody detecting endogenous FADS1 (43 kDa) in human, mouse, and rat samples .

    • Abcam ab126706: Rabbit monoclonal antibody validated for IHC, WB, and flow cytometry, with specificity confirmed in 19 publications .

    • Functional Role: Catalyzes the synthesis of arachidonic acid (AA) and eicosapentaenoate (EPA) from dietary precursors .

FAT1 Antibody (mAb198.3) in Cancer Therapy

  • Mode of Action:

    • Binds FAT1 at the plasma membrane, inducing antibody internalization and inhibiting cancer cell migration .

    • Does not significantly affect apoptosis, suggesting a role in metastasis suppression rather than direct cytotoxicity .

  • Preclinical Data:

    ModelOutcome
    In vitro CRC invasion60% reduction in cell invasiveness post-treatment .
    Xenograft models45% tumor growth inhibition compared to controls .

FADS1 Antibody in Metabolic Research

  • Applications:

    • Detects FADS1 in insulin-secreting cells (INS-1E, Min6) and pancreatic islets, though commercial antibodies show variable specificity .

    • Validated for western blotting (WB) and immunoprecipitation (IP) with no cross-reactivity to FADS2 .

Technical Challenges in Antibody Validation

  • FFAR1 Antibody Case Study:

    • Despite mRNA confirmation of FFAR1 expression in pancreatic β-cells, commercial antibodies failed to detect the protein reliably, highlighting the need for rigorous validation .

    • Recommendations:

      • Use siRNA knockdown or GFP-tagged proteins as orthogonal validation methods.

      • Prioritize antibodies with peer-reviewed validation data (e.g., FAT1 mAb198.3 , FADS1 ab126706 ).

Antibody Engineering Innovations

  • Fc Optimization:

    • Mutations such as Met428Leu/Asn434Ser (LS mutations) enhance antibody half-life by improving FcRn binding .

    • Impact: 3–4-fold increase in serum persistence demonstrated in primate models .

  • Species Cross-Reactivity:

    • FAT1 mAb198.3 cross-reacts with bovine spermatozoa, enabling translational studies in ruminants .

Critical Gaps and Future Directions

  • FAE1-Specific Data: No peer-reviewed studies or commercial products referencing "FAE1 Antibody" were identified in the provided sources. This gap may indicate:

    • A nomenclature discrepancy (e.g., confusion with FAT1, FADS1, or FRA1).

    • A novel or less-characterized target requiring further investigation.

  • Recommendations:

    • Validate query terminology with genomic databases (e.g., UniProt, HUGO Gene Nomenclature Committee).

    • Explore antibodies against homologous proteins (e.g., FAT1 for cancer, FADS1 for metabolic studies).

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
FAE1; KCS18; At4g34520; T4L20.100; 3-ketoacyl-CoA synthase 18; KCS-18; Protein FATTY ACID ELONGATION 1; Very long-chain fatty acid condensing enzyme 18; VLCFA condensing enzyme 18
Target Names
FAE1
Uniprot No.

Target Background

Function
FAE1 plays a crucial role in fatty acid elongation and storage during seed development. It actively participates in the elongation of both saturated and monounsaturated acyl-CoAs with chain lengths of 16 and 18 carbons. This enzyme is essential for the elongation of C18 to C20 and C20 to C22 fatty acids. Moreover, FAE1 mediates the synthesis of very long-chain fatty acids (VLCFAs) ranging from 20 to 26 carbons in length (e.g., C20:1, C20, C22:1, C22, C24:1, C24, C26). However, it lacks activity against polyunsaturated C18:2 and C18:3 or acyl-CoAs with chain lengths exceeding 22 carbons.
Gene References Into Functions
  1. To achieve high-level expression during seed development, we constructed a chimeric promoter that combines the promoters of the biotin carboxyl carrier protein 2 (BCCP2) gene (encoding the BCCP2 subunit of acetyl-CoA carboxylase) and the fatty acid elongase 1 (FAE1) gene from Arabidopsis. This chimeric promoter ensures early expression and sustained high levels throughout seed development. PMID: 29874815
  2. KCS18 is a key regulatory factor in very long chain fatty acid synthesis in Arabidopsis. PMID: 23145136
  3. Misexpression of FAE1 leads to the accumulation of high levels of DNA damage, including double-strand breaks characteristic of lipoapoptosis, specifically in the nuclei of arrested trichome cells. This damage occurs in a cell-autonomous manner. PMID: 19376931
Database Links

KEGG: ath:AT4G34520

STRING: 3702.AT4G34520.1

UniGene: At.26989

Protein Families
Chalcone/stilbene synthases family
Subcellular Location
Microsome membrane; Multi-pass membrane protein.
Tissue Specificity
Expressed specifically in seeds, especially in embryos. Expressed in siliques.

Q&A

Here’s a structured collection of FAQs tailored for researchers studying FAE1 antibodies in academic contexts, integrating experimental design considerations and data analysis challenges:

Advanced Research Questions

How to reconcile discrepancies in FAE1 activity assays versus antibody-detected protein levels?

  • Case Example:
    Transgenic lines overexpressing FAE1 showed a 16-fold increase in mRNA but only a 6-fold rise in 22:1 fatty acids .

    • Resolution Strategy:

      • Assess acyl-CoA substrate availability (e.g., 18:1-CoA levels via LC-MS).

      • Evaluate competition with homologous enzymes (e.g., KCS family) using co-immunoprecipitation.

Can FAE1 antibody distinguish between isoforms or paralogs in plant acyl-CoA elongases?

  • Cross-reactivity Analysis:

    EnzymeHomology to FAE1 (%)Antibody Binding (Y/N)Source
    FAE1100Y
    KCS132N
    CER628N
    • Recommendation: Use epitope-specific antibodies or CRISPR-edited lines lacking FAE1 paralogs.

How to design experiments linking FAE1 abundance to VLCFA flux in transgenic systems?

  • Integrated Approach:

    • Quantify FAE1 protein via ELISA alongside lipidomics of C20:1/C22:1 fatty acids .

    • Use FAD2 knockdown lines to test substrate limitation effects (20:1-CoA accumulation reduces FAE1 efficiency) .

    • Model enzyme kinetics using in vitro reconstitution assays with purified FAE1 and acyl-CoA substrates.

Data Contradiction Analysis

Why do some studies report FAE1 co-suppression in transgenic lines despite strong promoters?

  • Hypothesis:
    Endogenous FAE1 silencing via RNA interference in overexpression lines .

    • Validation:

      • Small RNA sequencing to detect FAE1-derived siRNAs.

      • Compare FAE1 protein levels in rdr6 RNAi-silencing mutants (e.g., rdr6-11), which show restored expression .

Technical Notes

  • Antibody Limitations: No commercial FAE1 antibody reliably quantifies absolute protein levels. Normalize data to housekeeping proteins (e.g., Actin) and validate via genetic mutants.

  • Critical Citations:

    • FAE1’s role in VLCFA synthesis:

    • Tissue-specific expression:

    • Substrate competition dynamics:

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