KDM1B Antibody

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Description

Overview of KDM1B Antibody

KDM1B antibodies are monoclonal or polyclonal reagents that bind specifically to the KDM1B protein. They are validated for use in techniques such as Western blot (WB), flow cytometry (FC), and enzyme-linked immunosorbent assay (ELISA). Key properties include:

PropertyDetails
Target ProteinKDM1B (UniProt ID: Q8NB78; Entrez Gene ID: 221656)
Molecular Weight92 kDa (observed and calculated)
Host SpeciesMouse, rabbit, or recombinant formats
ReactivityHuman, mouse, rat
ApplicationsWB, ELISA, FC, chromatin immunoprecipitation (ChIP)
Key EpitopesN-terminal region, full-length recombinant protein, or specific peptide sequences

2.1. Cancer Biology

  • Oncogenic Role: KDM1B is overexpressed in breast, colorectal, and lung cancers, where it promotes tumor growth and chemoresistance by demethylating H3K4me1/me2 . Antibodies enable detection of KDM1B in cancer cell lines and patient tissues.

  • Stemness Regulation: In breast cancer, KDM1B overexpression enriches cancer stem cell (CSC) populations (e.g., CD44+/EpCAM-, ALDHhigh) and upregulates pluripotency markers (NANOG, SOX2) . Neutralizing KDM1B with inhibitors like tranylcypromine reduces CSC expansion .

2.2. Epigenetic Studies

  • Chromatin Remodeling: KDM1B antibodies facilitate ChIP-seq analyses to map KDM1B’s interaction with genes involved in stemness, DNA repair, and immune evasion .

  • Enzyme Activity: Studies show KDM1B demethylates H3K4 but not H3K9 or H3K27, distinguishing it from LSD1/KDM1A .

3.1. Mechanistic Insights

  • IFN-I → KDM1B Axis: Type I interferons (IFN-I) upregulate KDM1B during chemotherapy, driving CSC plasticity and immune escape. KDM1B inhibition blocks this process, improving tumor control in murine models .

  • Morphological Changes: Overexpression of KDM1B in MDA-MB-231 breast cancer cells induces cobblestone-like morphology and alters epigenetic modifiers (e.g., LSD1, HDAC1/2) .

3.2. Clinical Correlations

  • Prognostic Marker: High KDM1B expression correlates with poor survival in basal-like breast cancer and HER2-negative tumors .

  • Therapeutic Target: Preclinical data support combining KDM1B inhibitors (e.g., tranylcypromine) with immunogenic therapies to prevent CSC-driven relapse .

Technical Considerations

  • Sample Preparation: Nuclear extraction via high-salt sonication is recommended for chromatin-bound KDM1B .

  • Validation: Specificity confirmed via siRNA knockdown and overexpression models .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
We are typically able to ship products within 1-3 business days of receiving your order. Delivery times may vary depending on the purchase method or location. Please consult your local distributor for specific delivery times.
Synonyms
amine oxidase (flavin containing) domain 1 antibody; amine oxidase, flavin containing 1 antibody; AOF1 antibody; bA204B7.3 antibody; C6orf193 antibody; dJ298J15.2 antibody; Flavin-containing amine oxidase domain-containing protein 1 antibody; FLJ33898 antibody; FLJ34109 antibody; FLJ43328 antibody; KDM1B antibody; KDM1B_HUMAN antibody; LSD2 antibody; lysine (K)-specific demethylase 1B antibody; Lysine-specific demethylase 2 antibody; Lysine-specific histone demethylase 1B antibody; Lysine-specific histone demethylase 2 antibody
Target Names
KDM1B
Uniprot No.

Target Background

Function
KDM1B is a histone demethylase that removes methyl groups from lysine 4 of histone H3 (H3K4). H3K4 methylation is a key epigenetic mark associated with transcriptional activation. By demethylating H3K4, KDM1B acts as a corepressor, inhibiting gene expression. KDM1B is also involved in the de novo methylation of a subset of imprinted genes during oogenesis. KDM1B achieves its demethylase activity by oxidizing the substrate using FAD, generating an imine that is subsequently hydrolyzed. It can demethylate both mono- and di-methylated H3K4, but does not affect tri-methylated H3K4. Additionally, KDM1B does not affect the methylation status of other lysine residues on histone H3, including Lys-9, Lys-27, Lys-36, or Lys-20 on histone H4.
Gene References Into Functions
  1. Studies have shown that LSD2 (KDM1B) promotes the growth of small cell lung cancer by indirectly upregulating TFPI2 expression through the mediation of DNMT3B expression or by regulating the demethylation of H3K4me1 in the promoter region of the TFPI2 gene. PMID: 29845195
  2. This review focuses on small-molecule inhibitors targeted at the two flavin adenine dinucleotide-dependent lysine demethylases, lysine-specific demethylases 1 and 2 (KDM1A and KDM1B), and examines how the inhibitors interact with the tertiary structures of these enzymes. PMID: 28277979
  3. Research indicates a crucial role for LSD2 (KDM1B) in regulating DNA methylation and gene silencing in breast cancer. PMID: 24924415
  4. KDM1B has been shown to act as an E3 ubiquitin ligase, inhibiting cancer cell growth by promoting the proteasomal degradation of OGT. PMID: 25773598
  5. Transcriptome and chromatin immunoprecipitation-sequencing analyses have revealed that LSD2 (KDM1B) represses genes involved in lipid influx and metabolism through demethylation of histone H3K4. PMID: 25624347
  6. Research has demonstrated the regulation of tissue factor pathway inhibitor-2 (TFPI-2) expression by lysine-specific demethylases 1 and 2 (KDM1A and KDM1B). PMID: 25036127
  7. The zinc finger-SWIRM-oxidase domains are essential for KDM1B demethylase activity and the binding of FAD. PMID: 23266887
  8. Human LSD2/KDM1b/AOF1 regulates gene transcription by modulating intragenic H3K4me2 methylation. PMID: 20670891

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Database Links

HGNC: 21577

OMIM: 613081

KEGG: hsa:221656

STRING: 9606.ENSP00000297792

UniGene: Hs.709336

Protein Families
Flavin monoamine oxidase family
Subcellular Location
Nucleus.

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