loxl2b Antibody

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Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
loxl2b antibody; si:dkeyp-32b1.1 antibody; zgc:158414 antibody; Lysyl oxidase homolog 2B antibody; EC 1.4.3.13 antibody; Lysyl oxidase-like protein 2B antibody
Target Names
loxl2b
Uniprot No.

Target Background

Function
LOXL2B is an enzyme that mediates the post-translational oxidative deamination of lysine residues on target proteins, resulting in the formation of deaminated lysine (allysine). It functions as a transcription corepressor and specifically targets trimethylated 'Lys-4' of histone H3 (H3K4me3), a marker for epigenetic transcriptional activation. LOXL2B exhibits no activity against histone H3 when it is trimethylated on 'Lys-9' (H3K9me3) or 'Lys-27' (H3K27me3) or when 'Lys-4' is monomethylated (H3K4me1) or dimethylated (H3K4me2). Additionally, LOXL2B mediates deamination of methylated TAF10, a component of the transcription factor IID (TFIID) complex. This deamination leads to the release of TAF10 from promoters, resulting in the inhibition of TFIID-dependent transcription. LOXL2B-mediated deamination of TAF10 contributes to the transcriptional repression of genes essential for embryonic stem cell pluripotency. LOXL2B is involved in epithelial to mesenchymal transition (EMT) and participates in the repression of E-cadherin, likely by mediating deamination of histone H3. When secreted into the extracellular matrix, LOXL2B promotes cross-linking of extracellular matrix proteins through the oxidative deamination of peptidyl lysine residues in precursors to fibrous collagen and elastin. LOXL2B acts as a regulator of sprouting angiogenesis, potentially through collagen IV scaffolding. It also regulates chondrocyte differentiation, likely by modulating the expression of factors that control chondrocyte differentiation. LOXL2B is required with loxl2a for the correct expression of Sox2 and for neural differentiation.
Database Links
Protein Families
Lysyl oxidase family
Subcellular Location
Secreted, extracellular space, extracellular matrix, basement membrane. Nucleus. Chromosome. Endoplasmic reticulum.

Q&A

What is LOXL2, and why is it targeted by antibodies in research?

LOXL2 (lysyl oxidase-like 2) is a copper-dependent enzyme that oxidizes lysine residues in collagen and elastin, enabling cross-linking and extracellular matrix (ECM) stabilization . Antibodies targeting LOXL2 are used to:

  • Inhibit enzymatic activity (e.g., AB0023, an allosteric inhibitor)

  • Track protein localization (e.g., in fibrotic tissues or cancer microenvironments)

  • Study epigenetic regulation via histone H3K4me3 deamination

Basic vs. Advanced Focus

BasicAdvanced
Identifying LOXL2 expression in tissuesMapping antibody epitopes (e.g., SRCR-4 domain for AB0023)
Using antibodies for IHC/IFValidating antibody specificity in disease models
  • For inhibition studies: Use AB0023, which binds remote from the catalytic site, enabling substrate-independent inhibition .

  • For protein detection: Use ab96233 or CSB-RA907007A0HU, validated for multiple techniques .

How can I validate LOXL2 antibody specificity in my experimental system?

Validate specificity through:

  • Positive Controls

    • Use recombinant LOXL2 or lysates from LOXL2-overexpressing cells.

  • Negative Controls

    • Include LOXL2 knockdown/knockout samples (CRISPR or siRNA).

  • Competitive Blocking

    • Pre-incubate antibody with immunizing peptide or recombinant LOXL2 to confirm epitope specificity .

Troubleshooting Cross-Reactivity

IssueSolution
Non-specific bands in WBOptimize blocking buffer (e.g., 5% BSA instead of milk)
Off-target staining in IHCPerform epitope retrieval optimization (e.g., heat-induced antigen retrieval)

What experimental workflows should I use to study LOXL2’s dual roles in ECM remodeling and intracellular signaling?

LOXL2’s dual functions require tailored approaches:

ECM Remodeling Studies

  • Collagen Cross-Linking Assays

    • Treat cells with AB0023 (1–10 µM) and measure collagen stiffness via atomic force microscopy .

  • Fibrosis Models

    • Use Sirius Red staining to quantify collagen deposition in tissues treated with LOXL2 inhibitors .

Intracellular Signaling Studies

  • Epigenetic Analysis

    • Perform ChIP-seq for H3K4me3 after LOXL2 knockdown to assess chromatin remodeling .

  • EMT Pathway Profiling

    • Co-immunoprecipitate LOXL2 with SNAI1 or CBX5/HP1A to study chromatin interactions .

How does LOXL2 processing by proteases like FXa affect antibody binding?

LOXL2 is cleaved by serine proteases (e.g., FXa), generating a 65 kDa fragment . This impacts antibody utility:

Antibody TypeImpact of CleavageRecommendation
C-terminal-targetingFull-length vs. processed fragment recognitionUse N-terminal antibodies for consistent detection
Allosteric inhibitors (e.g., AB0023)Unaffected (binds SRCR-4, distant from cleavage sites)Validated for FXa-processed LOXL2

Experimental Protocol for Processing Studies

  • In Vitro Cleavage

    • Incubate recombinant LOXL2 with FXa (1 U/µg protein, 37°C, 1 hr).

  • Western Blot

    • Use C-terminal (ab96233) and N-terminal (custom) antibodies to detect full-length and processed forms .

How do I interpret conflicting data on LOXL2’s role in cancer progression?

LOXL2’s context-dependent effects require nuanced analysis:

ObservationMechanistic InsightMethodological Approach
High LOXL2 → Poor prognosisPromotes metastasis via ECM remodelingUse orthotopic tumor models with LOXL2 inhibitors
LOXL2 inhibition → Senescence inductionEpigenetic repression of pluripotency genesPerform RNA-seq on LOXL2 knockdown cells

Data Reconciliation Strategy

  • Tumor Subtype Analysis

    • Use TCGA data to correlate LOXL2 expression with immune/stromal scores in specific cancers (e.g., PAAD, LIHC) .

  • Dual Inhibition Approaches

    • Combine LOXL2 inhibitors (AB0023) with checkpoint immunotherapies to dissect ECM vs. immune roles .

What are the limitations of using LOXL2 antibodies in preclinical models?

LimitationMitigation Strategy
Species-Specific EpitopesValidate cross-reactivity in non-human primates
Partial Inhibition (e.g., AB0023)Combine with small-molecule inhibitors for full enzymatic blockade
Epitope Masking in Diseased TissuesUse cryosectioning instead of paraffin embedding for IHC

How can I optimize LOXL2 antibody performance in challenging samples (e.g., fibrotic liver or tumor tissues)?

ChallengeSolution
High background in IHCUse tyramide signal amplification (TSA) kits
Low expression in FFPE samplesOptimize antigen retrieval (e.g., 10 mM citrate buffer, pH 6.0, 95°C, 20 min)
Cross-reactivity with LOXConfirm specificity via LOX/LOXL2 knockout controls

What emerging techniques should I consider for LOXL2 antibody-based research?

  • Single-Cell Proteomics

    • Use recombinant LOXL2 antibodies in mass cytometry to profile cellular heterogeneity in tumors .

  • CRISPR-Cas9 Screening

    • Combine LOXL2 knockouts with antibody-based validation to identify synthetic lethal targets .

How do I design experiments to study LOXL2’s interaction with other fibrotic pathways (e.g., TGF-β)?

  • Dual Inhibition

    • Treat fibrotic models with AB0023 (LOXL2 inhibitor) + TGF-β receptor kinase inhibitors.

  • Proteomic Profiling

    • Perform IP-MS on LOXL2 immunoprecipitates to identify TGF-β pathway interactors .

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