LY6G Antibody

LY6G, Rat Anti Mouse Antibody
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Description

Molecular Structure and Expression

SERPINB4 is a 45 kDa intracellular protein belonging to the ov-serpin (ovalbumin-related serpin) family. Its structure includes a conserved serpin domain with a reactive center loop (RCL) that mediates protease inhibition .

Functional Mechanisms

SERPINB4 modulates protease activity and cellular pathways through distinct mechanisms:

A. Protease Inhibition

  • Targets chymotrypsin-like serine proteases (e.g., cathepsin G) .

  • Inhibits granzyme M (GrM), a cytotoxic protease from NK cells, with a second-order rate constant of 1.3×104M1s11.3 \times 10^4 \, \text{M}^{-1}\text{s}^{-1} .

B. Cellular Homeostasis

  • Suppresses apoptosis in intestinal epithelial cells (IECs) via STAT signaling .

  • Promotes wound healing and migration in IECs under physiological conditions .

C. Inflammatory Regulation

  • Mutant SERPINB4 (K160E) upregulates proinflammatory cytokines (IL-6, IL-17, CCL2) and activates NF-κB pathways in Crohn’s disease .

A. Inflammatory Bowel Disease (IBD)

  • A heterozygous SERPINB4 mutation (A478G) identified in Crohn’s disease patients disrupts IEC proliferation and barrier function, triggering apoptosis and inflammation .

    • Key Findings:

      • Mutant SERPINB4 reduces IEC migration by 60% compared to wild type .

      • Upregulates IL-1β, IL-6, and CXCR2, exacerbating mucosal damage .

B. Cancer

  • Overexpressed in squamous cell carcinomas, where it inhibits GrM-mediated tumor cell death, enabling immune evasion .

  • Correlates with poor prognosis in colorectal adenocarcinoma (COAD) but paradoxically improves survival in some cohorts .

C. Autoimmunity

  • Forms complexes with autoantigens (e.g., Pso p27) linked to psoriasis and chronic inflammation .

Interaction Network

SERPINB4 collaborates with proteins across immune and apoptotic pathways:

Functional PartnerRoleInteraction Score
SERPINB3Co-inhibitor of cysteine proteases0.999
CTSGTarget protease for inhibition0.973
S100A9Mediator of inflammation0.705
PLGModulates fibrinolysis0.690

Therapeutic Potential

  • IBD: Targeting SERPINB4 mutations may restore IEC barrier function .

  • Oncology: Blocking SERPINB4-GrM interaction enhances NK cell cytotoxicity .

  • Autoimmune Diseases: Neutralizing SERPINB4-autoantigen complexes reduces inflammation .

Recombinant Applications

Recombinant SERPINB4 (e.g., PRO-2208) is used to study:

  • Protease inhibition kinetics .

  • Apoptosis pathways in cancer cell lines .

  • Epithelial repair mechanisms in IBD models .

Product Specs

Introduction
Myeloid differentiation antigen Gr1 (Ly6G) is a GPI-anchored protein expressed briefly on monocytes in the bone marrow. Ly6G expression in the bone marrow directly correlates with granulocyte differentiation and maturation. The molecule's function was first identified when Ly6G ligation on murine neutrophils inhibited neutrophil recruitment. Primarily found on neutrophils, Ly6G is also present in a subset of eosinophils, differentiating pre-monocytes, and plasmacytoid dendritic cells.
Formulation
Supplied at a concentration of 1 mg/ml in PBS buffer (after reconstitution).
Shipping Conditions
The antibody is shipped in a lyophilized form at ambient temperature.
Storage Procedures
For long-term storage, keep the lyophilized antibody at 4°C in a dry environment. After reconstitution, aliquot and store at -20°C if not intended for use within one month.
Solubility
Reconstitute the antibody with distilled water (H2O). Gently mix the solution, ensuring to wash the sides of the vial, and allow it to sit for 30-60 seconds before use.
Applications
This antibody is suitable for flow cytometry, immunohistochemistry, and cell depletion applications. It specifically recognizes Ly-6G, expressed on most myeloid cells in the bone marrow and all peripheral granulocytes. For flow cytometry, the recommended concentration is 10 µl per 1 million cells (10^6 cells). The optimal titer for in vivo cell depletion (cytotoxicity) should be experimentally determined.
Available Conjugates
This antibody is also offered conjugated to biotin and FITC.
Synonyms
Lymphocyte antigen 6G, Ly-6G, Ly-6G.1, Ly6g, Gr1, Gr-1.
Purification Method
Protein A column.
Type
Rat Anti Mouse Monoclonal.
Clone
YRmLy-6G.
Immunogen
Ly-6G-transfected cell line.
Ig Subclass
Rat IgG2a.

Q&A

What is Ly6G and what cellular populations express this marker?

Ly6G (Lymphocyte antigen 6 complex locus G6D) is a 21-25 kDa glycosylphosphatidylinositol (GPI)-linked differentiation antigen expressed primarily by myeloid-derived cells in the bone marrow. It is predominantly found on neutrophils and serves as a reliable marker for neutrophil identification in mice. Monocytes express Ly6G transiently during bone marrow development, while expression in granulocytes and peripheral neutrophils correlates directly with cellular differentiation and maturation levels .

Ly6G is a component of the myeloid differentiation antigen Gr-1, together with Ly6C. The protein associates with β2 integrins CD11a and CD11b and can attenuate their expression and function. Studies suggest Ly6G plays important roles in neutrophil infiltration, recruitment, and migration, although its ligand remains currently unknown .

How do different Ly6G antibody clones compare in specificity and functionality?

Several antibody clones target Ly6G, each with distinct characteristics:

CloneSpecificityRecommended ApplicationsNotable Features
1A8-Ly6gReacts exclusively with Ly6G on neutrophilsFlow cytometry, neutrophil depletionHas reported antagonist activity; more specific than RB6-8C5
RB6-8C5 (anti-Gr1)Binds both Ly6G and Ly6CImmunohistochemistry, flow cytometryLess specific due to Ly6C binding; useful for IHC applications

The 1A8-Ly6g clone is reported to bind exclusively to Ly6G found on neutrophils, distinguishing it from the RB6-8C5 clone that recognizes both Ly6G and Ly6C. This specificity makes 1A8-Ly6g particularly valuable for applications requiring precise neutrophil identification or depletion studies .

What experimental protocols yield optimal results when using Ly6G antibodies for flow cytometry?

For flow cytometric analysis, researchers should follow these methodological considerations:

  • Titrate the antibody carefully to determine optimal concentration (recommended starting point: ≤0.25 μg per test, where a test represents the amount of antibody that will stain a cell sample in 100 μL final volume)

  • Determine cell number empirically (typical range: 10^5 to 10^8 cells/test)

  • For bone marrow cells, peripheral blood, or tissue samples, include proper controls

  • Use fluorochrome-conjugated 1A8-Ly6g for flow cytometry applications rather than unconjugated antibodies

  • Store antibodies according to manufacturer specifications to maintain functionality

When analyzing data, be aware that neutrophil populations typically present as Ly6G^high CD11b^+ cells in flow cytometry dot plots, and confirmation with additional markers may be necessary in certain inflammatory contexts.

What are the limitations of anti-Ly6G-mediated neutrophil depletion strategies?

Anti-Ly6G antibody depletion is never absolute, representing a critical limitation for researchers studying neutrophil functions in disease models. Several mechanisms contribute to incomplete depletion:

  • Rapid emergence of Ly6G^low neutrophils resistant to depletion

  • Antibody-induced Ly6G internalization causing surface Ly6G paucity

  • Development of anti-neutrophil-cytoplasmic-antibodies in vivo

  • Strain background differences in depletion efficiency (C57BL/6 mice background is particularly refractory to neutrophil depletion)

Methodologically, researchers should quantify neutrophil populations using alternative markers beyond Ly6G when assessing depletion efficiency. Additionally, implementing sequential staining protocols can help identify Ly6G^low populations that persist after depletion attempts .

How does anti-Ly6G antibody binding affect neutrophil functionality?

Anti-Ly6G binding induces significant functional changes in neutrophils rather than simply depleting them:

  • Ly6G internalization following antibody binding

  • Priming of the oxidative burst upon TNFα co-stimulation

  • Changes in neutrophil trafficking and tissue distribution

  • Alterations in neutrophil aging and polarization states

These functional changes are particularly relevant in experimental designs that rely on anti-Ly6G antibodies, as residual neutrophils may exhibit enhanced pro-inflammatory activities. In vitro experiments revealed that anti-Ly6G binding primes neutrophils for enhanced oxidative responses with TNFα co-stimulation, suggesting that incomplete depletion could paradoxically increase certain neutrophil effector functions .

What contradictory findings exist regarding Ly6G+ neutrophils in pain models?

The role of Ly6G+ neutrophils in pain models shows significant contradictions across studies:

StudyPain ModelEffect of Ly6G+ Neutrophil DepletionAssessment Methods
Carreira et al.IncisionalReduction of mechanical hypersensitivityReflex-based approaches
Other studiesIncisionalNo change in mechanical thresholds; slight worsening of heat hypersensitivityReflex-based approaches
Current evidenceIncisionalNo change in mechanical hypersensitivity; possible transient effect on heat hypersensitivityMultidimensional behavioral approach
CFA modelInflammatoryUnchanged mechanical hypersensitivity; accelerated recovery of heat hyperalgesiaMultidimensional behavioral approach

These contradictory results may stem from differences in:

  • Timing and routes of antibody administration (i.v. vs. i.p.)

  • Pain model induction characteristics (incision depths affecting immune response)

  • Assessment methodologies (reflex-based vs. multidimensional approaches)

  • Neutrophil phenotype (pro- vs. anti-inflammatory) in different pain contexts

Researchers should consider these variables when designing experiments investigating neutrophil contributions to pain mechanisms.

How can researchers overcome challenges with anti-Ly6G resistant neutrophil populations?

When facing Ly6G-low neutrophils resistant to depletion, researchers can implement several methodological approaches:

  • Use alternative or combinatorial depletion strategies targeting different neutrophil markers

  • Implement sequential staining protocols to detect internalized Ly6G

  • Monitor neutrophil populations using multiple markers (CD11b, Ly6C, etc.)

  • Consider alternative genetic approaches for neutrophil depletion

  • Account for the functional status of residual neutrophils in experimental analyses

Specific staining protocols can help identify true neutrophil populations despite Ly6G downregulation. For example, confirming that anti-Gr1 and anti-Ly6G antibodies are pauci-competitive allows for sequential staining approaches that can detect both membrane and intracellular Ly6G .

What synergistic approaches can enhance anti-Ly6G efficacy in cancer research models?

Recent research demonstrates potential synergistic approaches combining anti-Ly6G with other therapies in cancer models:

  • Combined anti-Ly6G with radiation therapy has shown a long-lasting tumor regression rate of 50% in the Kras^Lox-STOP-Lox-G12D/WT; Trp53^Flox/Flox mouse lung tumor model, which is typically refractory to standard therapies

  • G-CSF administration prior to radiation therapy can recapitulate this anti-tumor effect

  • Anti-TNFα antibody co-administration can abrogate these beneficial effects

Mechanistically, anti-Ly6G appears to regulate neutrophil aging while radiation therapy enhances the homing of anti-Ly6G-bound SiglecF^neg neutrophils to tumors. This highlights how intentional modulation of neutrophil functionality, rather than complete depletion, may offer therapeutic advantages in certain cancer contexts .

How do different tissue microenvironments affect Ly6G expression and antibody efficacy?

Tissue-specific microenvironments significantly impact Ly6G expression and anti-Ly6G antibody efficacy:

  • In tumor microenvironments, abnormal neutrophil accumulation and aging is accompanied by an N2-like SiglecF^pos polarization and ly6g downregulation

  • SiglecF^pos tumor-associated neutrophils (TANs) exposed to anti-Ly6G can revert to Ly6G^low and become resistant to depletion

  • Different tissues show varying levels of antibody penetration and neutrophil accessibility

  • Bone marrow and blood neutrophils show different patterns of antibody internalization (25% vs. 90% exhibiting cytosolic anti-Ly6G)

Researchers working with tissue-specific models should validate antibody efficacy in their specific tissue of interest rather than assuming uniform depletion across all compartments.

What controls and validation steps are essential when using Ly6G antibodies?

Researchers must implement rigorous controls when using Ly6G antibodies:

  • Include appropriate isotype controls (typically IgG2b for 1A8-Ly6g clone)

  • Validate antibody specificity through comparison with known neutrophil markers

  • Confirm depletion efficiency using alternative neutrophil markers beyond Ly6G

  • Assess neutrophil-specific enzyme activity (e.g., myeloperoxidase) to confirm functional depletion

  • Document antibody lot, concentration, and administration protocol in publications

  • Consider strain background effects on depletion efficiency

For depletion studies, measuring myeloperoxidase (MPO) activity in tissues provides a reliable verification of neutrophil presence independent of Ly6G expression changes .

What alternative approaches exist for neutrophil identification and manipulation beyond Ly6G?

When Ly6G approaches show limitations, researchers can consider these alternatives:

ApproachAdvantagesLimitationsBest Applications
CD11b/Ly6C combinationWorks when Ly6G is downregulatedLess specific than Ly6G aloneFlow cytometry identification
Myeloperoxidase assaysFunctional readout of neutrophil activityDestructive to tissueEndpoint analyses
S100A8/A9 (calprotectin)Neutrophil-enriched proteinsAlso expressed in monocytesHistology, proteomics
Genetic models (e.g., Catchup mice)Cell-specific manipulationRequires specialized breedingLineage tracing, specific depletion

Each alternative has distinct advantages depending on the experimental question, tissue type, and required specificity level. Combining multiple approaches can often provide more robust results than relying on a single marker or method .

Product Science Overview

Antibody Specificity and Clone Information

The Rat Anti-Mouse Ly-6G antibody, particularly the clone 1A8, is a monoclonal antibody that specifically recognizes the Ly-6G protein . This antibody is of the IgG2a, κ isotype and is produced by immunizing rats with Ly-6G transfected EL-4J cell lines . The clone 1A8 is known for its high specificity to Ly-6G and does not cross-react with Ly-6C, another member of the Ly-6 family .

Applications and Usage

The Rat Anti-Mouse Ly-6G antibody is widely used in various research applications, including:

  • Flow Cytometry (FC): This antibody is quality control tested for immunofluorescent staining with flow cytometric analysis. It is recommended to use ≤ 0.25 µg per 10^6 cells in 100 µl volume .
  • Immunohistochemistry (IHC): The antibody has been reported in the literature for use in both frozen and paraffin-embedded tissue sections .
  • Neutrophil Depletion: Clone 1A8 has been used in vivo to deplete neutrophils in mice, which is useful for studying the role of neutrophils in various disease models .
Preparation and Storage

The antibody is purified by affinity chromatography and is typically formulated in a phosphate-buffered solution, pH 7.2, containing 0.09% sodium azide . It should be stored undiluted between 2°C and 8°C to maintain its stability and effectiveness .

Technical Data and References
  • Isotype Control: Purified Rat IgG2a, κ isotype control is available for use as a negative control in experiments .
  • Verified Reactivity: The antibody has been verified to react with mouse Ly-6G .
  • Concentration: The antibody solution is typically provided at a concentration of 0.5 mg/ml .

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