SERPINB4 is a 45 kDa intracellular protein belonging to the ov-serpin (ovalbumin-related serpin) family. Its structure includes a conserved serpin domain with a reactive center loop (RCL) that mediates protease inhibition .
SERPINB4 modulates protease activity and cellular pathways through distinct mechanisms:
Targets chymotrypsin-like serine proteases (e.g., cathepsin G) .
Inhibits granzyme M (GrM), a cytotoxic protease from NK cells, with a second-order rate constant of .
Suppresses apoptosis in intestinal epithelial cells (IECs) via STAT signaling .
Promotes wound healing and migration in IECs under physiological conditions .
Mutant SERPINB4 (K160E) upregulates proinflammatory cytokines (IL-6, IL-17, CCL2) and activates NF-κB pathways in Crohn’s disease .
A heterozygous SERPINB4 mutation (A478G) identified in Crohn’s disease patients disrupts IEC proliferation and barrier function, triggering apoptosis and inflammation .
Overexpressed in squamous cell carcinomas, where it inhibits GrM-mediated tumor cell death, enabling immune evasion .
Correlates with poor prognosis in colorectal adenocarcinoma (COAD) but paradoxically improves survival in some cohorts .
SERPINB4 collaborates with proteins across immune and apoptotic pathways:
Functional Partner | Role | Interaction Score |
---|---|---|
SERPINB3 | Co-inhibitor of cysteine proteases | 0.999 |
CTSG | Target protease for inhibition | 0.973 |
S100A9 | Mediator of inflammation | 0.705 |
PLG | Modulates fibrinolysis | 0.690 |
IBD: Targeting SERPINB4 mutations may restore IEC barrier function .
Oncology: Blocking SERPINB4-GrM interaction enhances NK cell cytotoxicity .
Autoimmune Diseases: Neutralizing SERPINB4-autoantigen complexes reduces inflammation .
Recombinant SERPINB4 (e.g., PRO-2208) is used to study:
Ly6G (Lymphocyte antigen 6 complex locus G6D) is a 21-25 kDa glycosylphosphatidylinositol (GPI)-linked differentiation antigen expressed primarily by myeloid-derived cells in the bone marrow. It is predominantly found on neutrophils and serves as a reliable marker for neutrophil identification in mice. Monocytes express Ly6G transiently during bone marrow development, while expression in granulocytes and peripheral neutrophils correlates directly with cellular differentiation and maturation levels .
Ly6G is a component of the myeloid differentiation antigen Gr-1, together with Ly6C. The protein associates with β2 integrins CD11a and CD11b and can attenuate their expression and function. Studies suggest Ly6G plays important roles in neutrophil infiltration, recruitment, and migration, although its ligand remains currently unknown .
Several antibody clones target Ly6G, each with distinct characteristics:
Clone | Specificity | Recommended Applications | Notable Features |
---|---|---|---|
1A8-Ly6g | Reacts exclusively with Ly6G on neutrophils | Flow cytometry, neutrophil depletion | Has reported antagonist activity; more specific than RB6-8C5 |
RB6-8C5 (anti-Gr1) | Binds both Ly6G and Ly6C | Immunohistochemistry, flow cytometry | Less specific due to Ly6C binding; useful for IHC applications |
The 1A8-Ly6g clone is reported to bind exclusively to Ly6G found on neutrophils, distinguishing it from the RB6-8C5 clone that recognizes both Ly6G and Ly6C. This specificity makes 1A8-Ly6g particularly valuable for applications requiring precise neutrophil identification or depletion studies .
For flow cytometric analysis, researchers should follow these methodological considerations:
Titrate the antibody carefully to determine optimal concentration (recommended starting point: ≤0.25 μg per test, where a test represents the amount of antibody that will stain a cell sample in 100 μL final volume)
Determine cell number empirically (typical range: 10^5 to 10^8 cells/test)
For bone marrow cells, peripheral blood, or tissue samples, include proper controls
Use fluorochrome-conjugated 1A8-Ly6g for flow cytometry applications rather than unconjugated antibodies
Store antibodies according to manufacturer specifications to maintain functionality
When analyzing data, be aware that neutrophil populations typically present as Ly6G^high CD11b^+ cells in flow cytometry dot plots, and confirmation with additional markers may be necessary in certain inflammatory contexts.
Anti-Ly6G antibody depletion is never absolute, representing a critical limitation for researchers studying neutrophil functions in disease models. Several mechanisms contribute to incomplete depletion:
Rapid emergence of Ly6G^low neutrophils resistant to depletion
Antibody-induced Ly6G internalization causing surface Ly6G paucity
Development of anti-neutrophil-cytoplasmic-antibodies in vivo
Strain background differences in depletion efficiency (C57BL/6 mice background is particularly refractory to neutrophil depletion)
Methodologically, researchers should quantify neutrophil populations using alternative markers beyond Ly6G when assessing depletion efficiency. Additionally, implementing sequential staining protocols can help identify Ly6G^low populations that persist after depletion attempts .
Anti-Ly6G binding induces significant functional changes in neutrophils rather than simply depleting them:
Ly6G internalization following antibody binding
Priming of the oxidative burst upon TNFα co-stimulation
Changes in neutrophil trafficking and tissue distribution
These functional changes are particularly relevant in experimental designs that rely on anti-Ly6G antibodies, as residual neutrophils may exhibit enhanced pro-inflammatory activities. In vitro experiments revealed that anti-Ly6G binding primes neutrophils for enhanced oxidative responses with TNFα co-stimulation, suggesting that incomplete depletion could paradoxically increase certain neutrophil effector functions .
The role of Ly6G+ neutrophils in pain models shows significant contradictions across studies:
Study | Pain Model | Effect of Ly6G+ Neutrophil Depletion | Assessment Methods |
---|---|---|---|
Carreira et al. | Incisional | Reduction of mechanical hypersensitivity | Reflex-based approaches |
Other studies | Incisional | No change in mechanical thresholds; slight worsening of heat hypersensitivity | Reflex-based approaches |
Current evidence | Incisional | No change in mechanical hypersensitivity; possible transient effect on heat hypersensitivity | Multidimensional behavioral approach |
CFA model | Inflammatory | Unchanged mechanical hypersensitivity; accelerated recovery of heat hyperalgesia | Multidimensional behavioral approach |
These contradictory results may stem from differences in:
Timing and routes of antibody administration (i.v. vs. i.p.)
Pain model induction characteristics (incision depths affecting immune response)
Assessment methodologies (reflex-based vs. multidimensional approaches)
Neutrophil phenotype (pro- vs. anti-inflammatory) in different pain contexts
Researchers should consider these variables when designing experiments investigating neutrophil contributions to pain mechanisms.
When facing Ly6G-low neutrophils resistant to depletion, researchers can implement several methodological approaches:
Use alternative or combinatorial depletion strategies targeting different neutrophil markers
Implement sequential staining protocols to detect internalized Ly6G
Monitor neutrophil populations using multiple markers (CD11b, Ly6C, etc.)
Consider alternative genetic approaches for neutrophil depletion
Account for the functional status of residual neutrophils in experimental analyses
Specific staining protocols can help identify true neutrophil populations despite Ly6G downregulation. For example, confirming that anti-Gr1 and anti-Ly6G antibodies are pauci-competitive allows for sequential staining approaches that can detect both membrane and intracellular Ly6G .
Recent research demonstrates potential synergistic approaches combining anti-Ly6G with other therapies in cancer models:
Combined anti-Ly6G with radiation therapy has shown a long-lasting tumor regression rate of 50% in the Kras^Lox-STOP-Lox-G12D/WT; Trp53^Flox/Flox mouse lung tumor model, which is typically refractory to standard therapies
G-CSF administration prior to radiation therapy can recapitulate this anti-tumor effect
Anti-TNFα antibody co-administration can abrogate these beneficial effects
Mechanistically, anti-Ly6G appears to regulate neutrophil aging while radiation therapy enhances the homing of anti-Ly6G-bound SiglecF^neg neutrophils to tumors. This highlights how intentional modulation of neutrophil functionality, rather than complete depletion, may offer therapeutic advantages in certain cancer contexts .
Tissue-specific microenvironments significantly impact Ly6G expression and anti-Ly6G antibody efficacy:
In tumor microenvironments, abnormal neutrophil accumulation and aging is accompanied by an N2-like SiglecF^pos polarization and ly6g downregulation
SiglecF^pos tumor-associated neutrophils (TANs) exposed to anti-Ly6G can revert to Ly6G^low and become resistant to depletion
Different tissues show varying levels of antibody penetration and neutrophil accessibility
Bone marrow and blood neutrophils show different patterns of antibody internalization (25% vs. 90% exhibiting cytosolic anti-Ly6G)
Researchers working with tissue-specific models should validate antibody efficacy in their specific tissue of interest rather than assuming uniform depletion across all compartments.
Researchers must implement rigorous controls when using Ly6G antibodies:
Include appropriate isotype controls (typically IgG2b for 1A8-Ly6g clone)
Validate antibody specificity through comparison with known neutrophil markers
Confirm depletion efficiency using alternative neutrophil markers beyond Ly6G
Assess neutrophil-specific enzyme activity (e.g., myeloperoxidase) to confirm functional depletion
Document antibody lot, concentration, and administration protocol in publications
For depletion studies, measuring myeloperoxidase (MPO) activity in tissues provides a reliable verification of neutrophil presence independent of Ly6G expression changes .
When Ly6G approaches show limitations, researchers can consider these alternatives:
Approach | Advantages | Limitations | Best Applications |
---|---|---|---|
CD11b/Ly6C combination | Works when Ly6G is downregulated | Less specific than Ly6G alone | Flow cytometry identification |
Myeloperoxidase assays | Functional readout of neutrophil activity | Destructive to tissue | Endpoint analyses |
S100A8/A9 (calprotectin) | Neutrophil-enriched proteins | Also expressed in monocytes | Histology, proteomics |
Genetic models (e.g., Catchup mice) | Cell-specific manipulation | Requires specialized breeding | Lineage tracing, specific depletion |
Each alternative has distinct advantages depending on the experimental question, tissue type, and required specificity level. Combining multiple approaches can often provide more robust results than relying on a single marker or method .
The Rat Anti-Mouse Ly-6G antibody, particularly the clone 1A8, is a monoclonal antibody that specifically recognizes the Ly-6G protein . This antibody is of the IgG2a, κ isotype and is produced by immunizing rats with Ly-6G transfected EL-4J cell lines . The clone 1A8 is known for its high specificity to Ly-6G and does not cross-react with Ly-6C, another member of the Ly-6 family .
The Rat Anti-Mouse Ly-6G antibody is widely used in various research applications, including: