mab-5 Antibody

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Description

Mab5 Against SARS-CoV-2

Mab5 is a murine monoclonal antibody initially developed to neutralize SARS-CoV-1 but later found to cross-react with SARS-CoV-2. It targets the conserved HR2 region within the S2 subunit of the spike protein, enabling broad activity against emerging variants .

Key Findings:

  • Neutralization Efficacy:

    • IC₅₀: 12.3 μg/mL against SARS-CoV-2, outperforming Mab3-2 (IC₅₀ = 87.4 μg/mL) .

    • Binding Affinity: Dissociation constant (K<sub>D</sub>) of 4.88 pM for the S2 subunit, indicating strong antigen interaction .

  • In Vivo Protection:

    • In Syrian hamster models, Mab5 (250 μg dose) achieved 100% survival post-SARS-CoV-2 challenge, with reduced viral loads in lung tissue .

    • Humanized Mab5 (hMab5.17) retained neutralizing potency (IC₅₀ = 12.2 μg/mL) and showed efficacy against variants of concern (VOCs) .

ParameterMab5Mab3-2
IC₅₀ (μg/mL)12.387.4
K<sub>D</sub> (pM)4.8832.85
Survival Rate (250 μg)100%0% (control)

Mechanism:

Mab5 binds the CB-119 epitope in the S2 subunit, disrupting viral entry by blocking membrane fusion . Its humanized form (hMab5.17) maintained slow off-rate kinetics (10<sup>−6</sup>/s), enhancing therapeutic durability .

Mab5 Against Acinetobacter baumannii

This Mab5 is a humanized IgG2a monoclonal antibody targeting the O-antigen capsular carbohydrates of the drug-resistant pathogen A. baumannii. It was developed to expand coverage beyond existing therapies like bispecific antibody C73 .

Key Findings:

  • Binding Breadth:

    • Bound 72.24% of U.S. isolates (n = 300) and 29.32% of international isolates (n = 250) .

    • Targets O-antigen type 1, unlike C73, which binds K-antigens .

  • In Vivo Efficacy:

    • 100% survival in murine models infected with A. baumannii HUMC1 or MRSN-1174 when treated with 50–250 μg of Mab5 .

    • Reduced bacterial load and prevented sepsis in immunocompromised hosts .

PanelMab5 BindingBsAb C73 Binding
U.S. Isolates (n = 300)72.24%32.1%
International Isolates (n = 250)29.32%18.4%

Mechanism:

Mab5 mediates opsonization and enhances phagocytosis by binding O-antigen polysaccharides, critical for immune evasion in A. baumannii .

Comparative Analysis

Both Mab5 antibodies exemplify the versatility of mAbs in targeting structurally distinct pathogens:

  • SARS-CoV-2 Mab5: Focuses on viral membrane fusion inhibition.

  • A. baumannii Mab5: Disrupts bacterial capsule integrity.

Challenges:

  • Variant Escape: SARS-CoV-2 Mab5 requires continuous evaluation against VOCs .

  • Coverage Gaps: A. baumannii Mab5 shows lower efficacy against non-U.S. strains, necessitating complementary mAbs .

Clinical and Research Implications

  • SARS-CoV-2: Humanized Mab5 is a candidate for variant-resistant prophylaxis and therapy .

  • A. baumannii: Mab5 is part of a multi-mAb cocktail strategy to overcome antibiotic resistance .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
mab-5 antibody; C08C3.3Homeobox protein mab-5 antibody; Protein male abnormal 5 antibody
Target Names
mab-5
Uniprot No.

Target Background

Function
MAB-5 is a transcription factor that plays a critical role in regulating gene expression during C. elegans development. It binds to the promoter region of the transcription factor lin-39, repressing its expression in Q neuroblasts. This repression is essential for directing the migration of the left Q neuroblast (QL) daughter cell. Furthermore, MAB-5 is required for posterior-specific pattern formation during postembryonic development, controlling the differentiation of epidermal, neuronal, and mesodermal cells in the posterior body region.
Gene References Into Functions
  1. EGL-20 mediates an acute inhibition of anterior migration independently of BAR-1 and MAB-5. Subsequently, a possible transcriptional response mediated by BAR-1 and MAB-5 occurs. PMID: 26863303
  2. Genes regulated by MAB-5 are enriched for those encoding secreted and transmembrane molecules that affect the extracellular matrix. PMID: 23642123
  3. Research demonstrates that wild-type mab-5 function is necessary for normal P(9-11).p fate. PMID: 20478294
  4. MAB-5 plays a role during ray formation. Studies suggest that functional specificity is conferred by the N-terminal arm and helix I, but not helix II, of the homeodomain. PMID: 12538523
  5. mab-5 expression was investigated in the neuroblast lineage of this nematode. PMID: 12930745
  6. In the P11 lineage, a complex between MAB-5 and the Pbx homolog CEH-20 directly regulates transcription of the BH3 domain gene egl-1 to initiate programmed cell death. PMID: 16421192

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Database Links

KEGG: cel:CELE_C08C3.3

STRING: 6239.C08C3.3

UniGene: Cel.18387

Protein Families
Antp homeobox family
Subcellular Location
Nucleus.
Tissue Specificity
Expressed asymmetrically in the QL neuroblast.

Q&A

Basic Research Questions

What is the primary antigenic target and mechanism of action of Mab-5 antibody?

Mab-5 targets the S2 subunit of the SARS-CoV-2 spike protein, a conserved region critical for viral membrane fusion. Its mechanism involves high-affinity binding (dissociation constant K D = 4.88 pM) to block conformational changes required for viral entry . Methodologically, epitope mapping was performed using competitive binding assays and cryo-electron microscopy (cryo-EM) to resolve structural interactions .

How is neutralizing activity quantified for Mab-5 in preclinical studies?

Neutralization is evaluated via plaque reduction neutralization tests (PRNT), with results expressed as IC50 values (concentration inhibiting 50% of viral activity). For Mab-5, IC50 against SARS-CoV-2 was 12.3 μg/mL, validated using in vitro assays with Vero-E6 cells and crystal violet staining .

Assay TypeTarget VariantIC50/PRNT50Reference
PRNTSARS-CoV-212.3 μg/mL
BLIS2 subunitK D = 4.88 pM

What experimental models validate Mab-5 efficacy?

  • In vitro: Neutralization assessed using pseudovirus or live-virus assays in cell lines (e.g., Vero-E6) .

  • In vivo: Syrian hamster models show reduced viral load and pathology post-infection .

Advanced Research Questions

How does humanization impact Mab-5’s binding affinity and therapeutic utility?

Humanization involves grafting murine Mab-5 variable regions onto human IgG frameworks. Post-humanization (hMab5.17), affinity slightly decreased (K D = 13 pM), but neutralizing activity remained comparable (IC50 = 12.2 μg/mL). Stability was confirmed via biolayer interferometry (BLI) and in vivo challenge models .

What structural insights explain Mab-5’s cross-reactivity with SARS-CoV-2 variants?

Cryo-EM of Mab-5 bound to the BA.5 RBD reveals interactions with conserved residues (e.g., N856, K854) in the S2 subunit. This explains neutralization of Omicron subvariants (XBB.1.16, EG.5) but not JN.1, which carries S:L455S/F456L mutations disrupting the epitope .

VariantNeutralization (PRNT50)Key Epitope Mutations
BA.58.7 ng/mLNone
XBB.1.1615.2 ng/mLF486P, F490S
JN.1No activityS:L455S, F456L

How do methodological differences in antibody engineering affect immunogenicity?

  • Chimerization: Fusion of murine variable regions with human constant domains (ChiMab5) retains neutralization but risks anti-drug antibodies (ADAs) .

  • Deimmunization: Computational tools predict T-cell epitopes in variable regions; iterative mutagenesis reduces immunogenicity while preserving affinity .

What strategies resolve discrepancies between in vitro and in vivo efficacy data?

  • Pharmacokinetic profiling: Adjust dosing intervals based on half-life (e.g., Syrian hamsters showed protection at 10 mg/kg q48h) .

  • Tissue penetration assays: Confocal microscopy quantifies antibody distribution in lung epithelium .

Methodological Best Practices

  • Epitope Binning: Use BLI or surface plasmon resonance (SPR) to map overlapping epitopes and avoid redundant antibody candidates .

  • ADA Risk Mitigation: Employ in silico tools like EpiMatrix to predict T-cell epitopes during humanization .

  • Variant Testing: Prioritize in vitro pseudotyping with mutant spikes before live-virus challenges .

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