MAPK11 antibodies target the human MAPK11 protein (UniProt ID: Q15759), encoded by the MAPK11 gene on chromosome 22. This kinase, also termed p38β, belongs to the p38 MAPK family and regulates cellular responses to stressors like cytokines and oxidative damage . Antibodies against MAPK11 are critical for identifying its activation state (e.g., phosphorylated forms) and interactions in signaling pathways .
Most MAPK11 antibodies are rabbit-derived polyclonal or monoclonal IgG antibodies. Key features include:
Immunogen: Fusion proteins or synthetic peptides corresponding to MAPK11’s conserved regions .
Specificity: Cross-reactivity with human, mouse, and rat isoforms due to high sequence homology .
Detection Methods: Conjugated secondary antibodies (e.g., biotin, DyLight®488) or direct labeling for techniques like Western blot (WB) and immunofluorescence (IF) .
Kinase Activation: Antibodies detect phosphorylated MAPK11 (p-MAPK11) at Thr180/Tyr182, critical for its enzymatic activity .
Protein Interactions: Co-immunoprecipitation (Co-IP) studies reveal interactions with substrates like ATF2 and RUNX2 .
Cancer: Overexpression of MAPK11 and p-MAPK11 correlates with poor prognosis in clear cell renal cell carcinoma (ccRCC). Knockdown studies using antibodies show reduced proliferation and migration in ccRCC cell lines .
Neurodegeneration: MAPK11 antibodies identify elevated kinase activity in Huntington’s disease models, linking p-MAPK11 to mutant Huntingtin (mHTT) accumulation .
Inhibitor Screening: MAPK11 antibodies validate compound efficacy in high-throughput screens. For example, Skepinone-L (IC<sub>50</sub>: 19.2 nM) and derivatives show promise in reducing MAPK11 activity .
Biomarker Potential: p-MAPK11 levels in cancer tissues, identified via IHC, correlate with tumor grade and survival rates .
Validation requires a triad approach:
Knockout/Knockdown Controls: Use siRNA or CRISPR-modified cell lines (e.g., HEK-293 or iPSC-derived cardiomyocytes) to confirm absence of the 42 kDa band .
Multi-Tissue Cross-Verification: Compare reactivity in Jurkat cells (positive control) with tissues lacking MAPK11 expression .
Epitope Comparison: Contrast antibodies targeting distinct regions (e.g., AA 133-161 vs. AA 251-363) to identify nonspecific bands .
Antigen Retrieval: Use TE buffer (pH 9.0) for formalin-fixed paraffin-embedded (FFPE) human brain sections; citrate buffer (pH 6.0) for mouse skeletal muscle .
Titration Range: Start at 1:20 dilution for high-abundance targets (e.g., ccRCC tissues), increasing to 1:200 for normal kidney .
Signal Amplification: Combine with tyramide-based systems when using polyclonal antibodies to enhance low-expressing targets .
N-Terminal (AA 1-30): Suitable for detecting full-length MAPK11 in WB but prone to cross-reactivity with MAPK14 .
Central Domain (AA 133-161): Ideal for IP/IF applications due to exposed loops in native conformation .
C-Terminal (AA 334-359): Preferable for phosphorylation studies (e.g., Y182 detection) .
Phospho-MAPK11 (p-MAPK11) drives ccRCC progression by stabilizing RUNX2 via direct interaction:
Co-Immunoprecipitation: Anti-p-MAPK11 antibodies confirmed physical binding to RUNX2 in 786-O cells (Figure 1G in ).
Half-Life Assays: Cycloheximide chase experiments showed p-MAPK11 inhibition reduces RUNX2 stability by 60% (t½ from 8h to 3h) .
Therapeutic Targeting: siRNA-mediated MAPK11 knockdown reduced ccRCC migration by 75% (Transwell assay) and proliferation by 40% (EdU assay) .
| Parameter | MAPK11 Knockdown (786-O Cells) | RUNX2 Overexpression |
|---|---|---|
| Migration (Cells/Field) | 85 ± 12 vs. 210 ± 18* | 290 ± 25 |
| EdU+ Cells (%) | 22% vs. 58%* | 72% |
| RUNX2 Protein Level | ↓60% | ↑300% |
| *Data from |
Contradictory reports on MAPK11’s cardioprotective vs. tumor-promoting roles require:
Cell-Type-Specific Analysis: Use iPSC-derived cardiomyocytes (hiPSC-CMs) for cardiac assays vs. KCL-22 CML cells for oncology .
Dual-Activity Validation: Confirm functional outcomes with phospho-specific antibodies (e.g., improved contractility post-MAPK11 inhibition correlates with p-MAPK11 ↓50% ).
Time-Resolved WB: Monitor MAPK11 activation at 0, 15, 30 min post-TKI treatment to capture transient signaling .
Proximity Ligation Assay (PLA): Combine anti-MAPK11 (AA 133-161) and anti-RUNX2 antibodies to visualize <200 nm interactions in ccRCC cells .
FRET-Based Biosensors: Use C-terminally tagged MAPK11 (e.g., mCerulean3) with RUNX2-mVenus to measure real-time binding kinetics .
Phos-Tag™ Gels: Resolve phosphorylated MAPK11-RUNX2 complexes using 50 μM Phos-Tag™ in SDS-PAGE .
Preabsorption Control: Incubate antibody (1:500) with 10x molar excess of immunogen peptide (AA 133-161) for 1h; eliminates >90% of off-target bands .
Cross-Species Validation: Test mouse-reactive clones (e.g., F-3) on rat myocardial infarction models to exclude interspecies cross-reactivity .
Buffer Optimization: Add 0.1% SDS to lysis buffer to dissociate MAPK11 from p38α/β complexes .
Xenograft Tumors: Inject MAPK11-knockdown 786-O cells into NSG mice; correlate IHC signal intensity (1:50 dilution) with tumor volume (R² >0.85 expected) .
Cardiac Injury Models: Induce myocardial ischemia in MAPK11-/- mice; confirm antibody failure to detect MAPK11 in knockouts vs. 40% signal retention in WT .