MPPED2 Antibody

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Description

Introduction

The MPPED2 antibody is a diagnostic and research tool designed to detect the Metallophosphoesterase-Domain-Containing Protein 2 (MPPED2), a Class III cyclic nucleotide phosphodiesterase with tumor suppressor properties. Its expression is frequently downregulated in cancers such as breast, cervical, and neuroblastoma, often due to promoter hypermethylation . This antibody facilitates the study of MPPED2’s role in carcinogenesis, epigenetic regulation, and cellular signaling pathways.

Structure and Function of MPPED2

MPPED2 is encoded by the MPPED2 gene located on chromosome 11p13, near the FSHB and PAX6 genes . It cleaves 3′,5′-cyclic nucleotides (cAMP/cGMP) into 5′-phosphate derivatives, modulating second messenger signaling . A unique glycine-to-histidine substitution at position 252 reduces its catalytic efficiency, allowing it to act as a scaffold for signaling proteins .

FeatureDescription
Gene Location11p13 chromosomal region
Protein ClassClass III cyclic nucleotide phosphodiesterase
Key SubstitutionGlycine at position 252 (reduces enzymatic activity)
Biological RoleTumor suppression, neurodevelopment, immune regulation

Antibody Development

MPPED2 antibodies are typically raised against recombinant proteins or synthetic peptides corresponding to conserved regions. Validation involves:

  • Western Blot: Confirms specificity by detecting a ~50 kDa band .

  • Immunohistochemistry (IHC): Demonstrates nucleolar localization in normal tissues and reduced staining in cancers .

  • ELISA: Quantifies protein levels in lysates .

Antibody TypeEpitopeValidation MethodSource
PolyclonalC-terminal domainIHC, Western Blot
MonoclonalN-terminal domainELISA, IF

Applications

The MPPED2 antibody is used in:

  1. Cancer Research:

    • Breast Cancer: Detects downregulation in aggressive subtypes (e.g., TNBC, HER2+) via IHC .

    • Cervical Cancer: Correlates inversely with p16INK4A expression in HPV-associated tumors .

    • Neuroblastoma: High expression predicts favorable prognosis .

  2. Epigenetic Studies:

    • Identifies promoter hypermethylation-induced silencing in cancers .

  3. Neurodevelopment:

    • Stains fetal brain tissue, highlighting its role in neural differentiation .

Clinical Relevance

  • Diagnostic Potential: MPPED2 antibodies may aid in identifying cancers with silencing mutations (e.g., rs2065418 SNP) .

  • Therapeutic Targeting: Overexpression of MPPED2 via CRISPR or lncRNA modulation (e.g., MPPED2-AS1) inhibits tumor growth .

Research Findings

StudyKey FindingsCitation
Breast CancerMPPED2 downregulation in 44/45 samples (p = 0.0027)
Cervical CancerInversely correlates with p16INK4A in HPV+ tumors (p < 0.0001)
NeuroblastomaHigh expression linked to better survival (p < 0.05)
WAGR SyndromeDeletions at 11p13 associated with Wilms tumor and intellectual disability

Product Specs

Buffer
Phosphate Buffered Saline (PBS) with 0.02% Sodium Azide, 50% Glycerol, pH 7.3. Store at -20°C. Avoid repeated freeze-thaw cycles.
Lead Time
Typically, we can ship your order within 1-3 business days of receipt. Delivery times may vary depending on the purchase method and location. For specific delivery times, please consult your local distributor.
Synonyms
MPPED2 antibody; C11orf8 antibody; FAM1B antibody; Metallophosphoesterase MPPED2 antibody; EC 3.1.-.- antibody; Fetal brain protein 239 antibody; 239FB antibody; Metallophosphoesterase domain-containing protein 2 antibody
Target Names
MPPED2
Uniprot No.

Target Background

Function
Exhibits low metallophosphoesterase activity in vitro. May play a role in the development of the nervous system.
Gene References Into Functions
  1. Overexpression of MPPED2 improves survival rates, significantly inhibits tumor growth, and induces neuronal differentiation. PMID: 22262177
  2. Structural analyses of MPPED2 and two mutant variants reveal that the reduced activity of MPPED2 is not only due to the substitution of an active-site histidine residue with glycine but also attributed to the binding of AMP or GMP to the active site. PMID: 21824479
Database Links

HGNC: 1180

OMIM: 600911

KEGG: hsa:744

STRING: 9606.ENSP00000350833

UniGene: Hs.289795

Protein Families
UPF0046 family
Tissue Specificity
Expressed predominantly in fetal brain.

Q&A

What is MPPED2 and what is its primary function in cellular processes?

MPPED2 (Metallophosphoesterase Domain Containing 2) is a protein that functions as a metallophosphodiesterase, cleaving 3',5'-cyclic phosphate nucleosides into 5'-phosphate nucleosides. It regulates the levels of cyclic second messengers including cAMP and cGMP and their degradation rates . MPPED2 exhibits low phosphodiesteric activity against cAMP and cGMP due to an amino acid replacement (glycine replacing histidine) at position 252 in the highly conserved catalytic site . This unique substitution allows the active site to retain AMP or GMP with strong affinity but reduces its catalytic efficiency.

MPPED2 is highly expressed in fetal and adult brain tissue and plays roles in neurodevelopment . Recent studies indicate MPPED2 functions as a tumor suppressor in multiple cancer types.

What types of MPPED2 antibodies are currently available for research applications?

Currently available MPPED2 antibodies can be categorized based on several characteristics:

CharacteristicAvailable OptionsDetails
Host SpeciesRabbit, MouseRabbit polyclonal is most common
ClonalityPolyclonal, MonoclonalPolyclonal offers broader epitope recognition
Target RegionN-Terminal, C-Terminal, Full-lengthN-Term antibodies show high cross-species reactivity
ApplicationsWB, IHC, IF/ICC, ELISAMost validated for Western Blotting
Species ReactivityHuman, Mouse, Rat, othersSome antibodies react across multiple species

For example, catalog number ABIN6750479 is a rabbit polyclonal antibody targeting the N-terminal region with reactivity to human, mouse, rat, cow, horse, rabbit, pig, and chicken MPPED2 . Similarly, catalog number 13270-1-AP is a rabbit polyclonal antibody validated for WB, IHC, and IF/ICC applications primarily on human samples .

How does MPPED2 expression vary across different tissues and what implications does this have for antibody selection?

MPPED2 shows tissue-specific expression patterns that researchers should consider when selecting antibodies:

  • Highest expression occurs in brain tissue, making it an ideal positive control

  • Expression is downregulated in multiple cancer types, including glioblastoma, cervical cancer, thyroid neoplasia, and breast cancer

  • Expression levels correlate with brain development stages, with high expression in fetal brain

These expression patterns have methodological implications:

  • Brain tissue should be used as a positive control when validating antibodies

  • For cancer studies, paired normal-tumor samples are essential for comparative analysis

  • When working with low-expressing tissues, more sensitive detection methods may be required

  • The observed molecular weight is consistently reported as approximately 33 kDa

What are the optimal conditions for Western blot detection of MPPED2?

Based on validated protocols from multiple antibody suppliers, optimal Western blot conditions for MPPED2 detection include:

ParameterRecommended ConditionsNotes
Sample TypeHuman brain tissue (optimal)Consistently shows strong signal at 33 kDa
Protein Loading20-50 μg total proteinMay need optimization based on tissue type
Dilution Range1:500-1:2000 for primary antibodyStart with 1:1000 and adjust as needed
Blocking Solution5% non-fat milk or BSA in TBSTBSA preferred when phosphorylation is studied
Observed Molecular Weight33 kDaConsistent across multiple antibodies
Membrane TypePVDF recommendedBetter protein retention for lower abundance proteins

For troubleshooting weak signals:

  • Increase protein loading for tissues with low MPPED2 expression

  • Extend primary antibody incubation to overnight at 4°C

  • Use enhanced chemiluminescence detection systems with longer exposure times

  • Consider concentrating protein samples when working with cell lines showing low expression

How should samples be prepared for optimal immunohistochemical detection of MPPED2?

For successful IHC detection of MPPED2, the following protocol parameters have been validated:

Protocol StepRecommended ConditionsRationale
Fixation10% neutral buffered formalin (24-48h)Preserves protein structure while maintaining antigenicity
Section Thickness4-5 μmOptimal for antibody penetration
Antigen RetrievalTE buffer pH 9.0Primary recommendation, though citrate buffer pH 6.0 is an alternative
Blocking3% H₂O₂ followed by 5% normal serumReduces both endogenous peroxidase activity and non-specific binding
Primary Antibody Dilution1:20-1:200Start with 1:50 for most applications
IncubationOvernight at 4°CMaximizes specific binding while minimizing background
Detection SystemPolymer-based detection systemsSuperior sensitivity compared to avidin-biotin methods
CounterstainHematoxylinProvides nuclear visualization

For brain tissue specifically, studies have shown strong MPPED2 immunoreactivity in normal brain samples, which progressively decreases in low-grade gliomas and is minimally detected in glioblastoma tissues . This pattern makes brain tissue an excellent model for validating antibody specificity and optimizing staining protocols.

What controls should be included when using MPPED2 antibodies in experimental protocols?

To ensure reliable and reproducible results with MPPED2 antibodies, incorporate these essential controls:

Control TypeImplementationPurpose
Positive Tissue ControlHuman brain tissue sections or lysatesConsistently expresses MPPED2 at detectable levels
Negative Tissue ControlTissues with low/no MPPED2 expressionVerifies specificity of staining pattern
Technical Negative ControlOmission of primary antibodyAssesses non-specific binding of secondary detection system
Absorption ControlPrimary antibody pre-incubated with immunizing peptideConfirms binding specificity to the target epitope
Expression ControlsMPPED2-overexpressing and knockdown samplesValidates antibody's ability to detect changes in expression levels
Cross-validationUse of multiple antibodies targeting different epitopesConfirms consistent detection patterns

Example: In glioblastoma studies, researchers validated MPPED2 antibody specificity by comparing expression patterns in normal brain tissue (high expression), low-grade gliomas (moderate expression), and glioblastomas (low expression), correlating protein detection with mRNA expression data from databases like TCGA and Gravendeel .

How is MPPED2 expression altered in different cancer types and what methodologies best detect these changes?

MPPED2 expression is consistently downregulated across multiple cancer types:

Cancer TypeExpression PatternDetection MethodsReference
GlioblastomaSignificantly downregulated compared to normal brain and low-grade gliomasRNA-seq, qRT-PCR, Western blot, IHC
Cervical CarcinomaReduced expression compared to normal cervical tissue; inverse correlation with p16INK4AIHC, qRT-PCR
Breast CancerDrastically downregulated in 44 out of 45 samples compared to normal tissueqRT-PCR, IHC tissue microarray
Thyroid NeoplasiaDownregulated in both benign and malignant thyroid tumorsMultiple methods
Oral Squamous Cell CarcinomaDecreased expressionVarious methods

In glioblastoma specifically, MPPED2 downregulation:

  • Correlates with tumor grade (lowest in grade IV tumors)

  • Shows a negative correlation with the aggressive mesenchymal subtype

  • Is associated with promoter hypermethylation (r = -0.4495, p < 0.0028)

  • Correlates positively with patient survival

For reliable detection of these expression changes, multi-modal approaches are recommended:

  • Start with mRNA expression analysis (qRT-PCR or RNA-seq)

  • Confirm at protein level with Western blotting (quantitative)

  • Visualize cellular and tissue distribution changes with IHC or IF

  • Correlate with methylation status of the MPPED2 promoter region

What functional studies demonstrate MPPED2's role as a tumor suppressor and how can researchers replicate these approaches?

Multiple functional studies support MPPED2's tumor suppressor role:

Experimental ApproachKey FindingsCell ModelsMethodological Notes
Restoration of MPPED2 expressionDecreased cell growth and migrationU251 and GLI36 glioblastoma cell linesTransfection with MPPED2 expression vectors followed by proliferation and migration assays
Chemosensitivity testingEnhanced sensitivity to temozolomideU251 and GLI36 cellsCell viability assays with varying TMZ concentrations in MPPED2-overexpressing cells
Apoptosis assessmentIncreased apoptotic cell deathGBM cells overexpressing MPPED2Activation of caspase 3 and 7
Pathway analysisInhibition of PI3K/AKT and NF-kB pathwaysU251 and GLI36 cellsWestern blot analysis of phosphorylation levels of PI3K and AKT, and levels of p65

To replicate these functional studies, researchers should:

  • Generate stable or transient MPPED2-overexpressing cell lines using appropriate expression vectors

  • Confirm overexpression by both qRT-PCR and Western blotting

  • Perform comparative functional assays (proliferation, migration, drug sensitivity)

  • Analyze molecular pathway alterations through Western blotting for key signaling components

  • Include appropriate controls (empty vector transfected cells)

The documented inhibitory effects on PI3K/AKT and NF-kB pathways may be related to MPPED2's role in regulating cAMP levels, as subtle changes in cAMP have been shown to modulate the phosphorylation of both p65 and PI3K/AKT .

How can MPPED2 be studied in relation to p16INK4A expression in cervical carcinoma?

Recent research has revealed an interesting relationship between MPPED2 and p16INK4A in cervical carcinoma:

ObservationMethodologySignificance
Inverse correlation between MPPED2 and p16INK4A expressionIHC staining and semi-quantitative scoringSuggests potential regulatory relationship or complementary roles
Higher p16INK4A expression in tissues with high-risk HPV viral genome integrationHPV genome detection combined with IHCLinks viral oncogenesis pathway to MPPED2 downregulation
Significant linear correlation (p=0.000) between p16INK4A and MPPED2 protein levelsStatistical analysis of expression dataIndicates biological relevance of the relationship

To study this relationship, researchers can:

  • Use a tissue cohort of cervical samples with known HPV status (high-risk HPV positive, low-risk HPV positive, and HPV negative)

  • Perform serial section IHC for both MPPED2 and p16INK4A

  • Apply semi-quantitative scoring methods as described by Kaur et al.:

    • Grade 0-3 based on staining intensity (no staining to strong)

    • Estimate percentage of positive cells (0-100%)

    • Calculate total score by combining intensity and percentage (maximum 8)

  • Correlate expression patterns with clinical parameters and HPV status

  • Perform in vitro studies using HPV-positive and HPV-negative cervical cancer cell lines to examine the functional relationship

How does MPPED2 polymorphism rs2065418 affect systemic inflammation and what methodologies are used to study this association?

The rs2065418 polymorphism in the MPPED2 gene has been associated with altered systemic inflammation and clinical outcomes:

GenotypeClinical ObservationInflammatory ProfileStudy Design
rs2065418 TTIncreased hospital length of stay, higher MODScores, longer mechanical ventilation timeAltered inflammatory responseComparison of severely injured (ISS ≥ 25) blunt trauma patients with TT vs. TG/GG genotypes

Research methodologies to study this association include:

  • Genotyping trauma patients using real-time PCR to identify rs2065418 variants

  • Stratifying patients based on injury severity (e.g., ISS ≥ 25)

  • Collecting and analyzing clinical data including:

    • Hospital length of stay

    • Multiple Organ Dysfunction Scores (MODScores)

    • Duration of mechanical ventilation

    • Plasma creatinine levels over time

  • Measuring plasma cytokine levels to assess inflammatory profiles

  • Statistical analysis to correlate genotype with clinical and inflammatory outcomes

Research has found that a certain injury severity threshold must be exceeded to observe the greater impact of rs2065418 TT genotype on outcomes, suggesting context-dependent effects of this polymorphism .

What techniques are available for studying MPPED2's phosphodiesterase activity and substrate specificity?

As a metallophosphoesterase, MPPED2's enzymatic activity can be studied using these approaches:

TechniqueApplicationMethodological Considerations
Phosphodiesterase Activity AssaysMeasure hydrolysis of cyclic nucleotidesRequires metal cofactors (Mn²⁺, Mg²⁺); monitor 5'-phosphate nucleoside production
Recombinant Protein ExpressionGenerate pure enzyme for in vitro studiesExpression in E. coli or mammalian cells with appropriate purification tags
Site-directed MutagenesisAssess impact of amino acid substitutionsFocus on conserved residues in the catalytic site, particularly position 252
Metal Dependency AnalysisDetermine optimal cofactorsTest activity with different divalent cations (Mn²⁺, Mg²⁺, Ca²⁺, Zn²⁺)
Substrate Specificity ProfilingIdentify preferred substratesCompare hydrolysis rates of cAMP, cGMP, and other potential substrates

Researchers should note that MPPED2 exhibits relatively low catalytic efficiency compared to other phosphodiesterases due to the glycine substitution at position 252, which enables strong substrate binding but reduces turnover rate . Studies in Drosophila have confirmed that the ortholog (dMpped) hydrolyzes phosphodiester substrates including cAMP and cGMP in a metal-dependent manner, suggesting evolutionary conservation of this function .

How can evolutionary conservation of MPPED2 be leveraged in research using model organisms?

MPPED2 is highly conserved across species, offering opportunities for comparative research:

Model OrganismMPPED2 OrthologResearch ApplicationsKey Findings
DrosophiladMpped (CG16717)Genetic manipulation, functional studiesAffects lifespan, immune pathways, and olfaction; mammalian MPPED2 can rescue dMpped knockout phenotypes
MammalsMPPED1 and MPPED2Comparative functional studies>80% similarity at amino acid level; both expressed in brain with similar biochemical properties
C. elegansOrtholog identifiedDevelopmental studiesConserved function
Mycobacterium tuberculosisStructural orthologEvolutionary protein structure studiesBasic functional conservation across distant species

Research approaches leveraging evolutionary conservation:

  • Cross-species rescue experiments (e.g., expressing human MPPED2 in dMpped knockout flies)

  • Comparative expression analysis across developmental stages in different organisms

  • Structural biology approaches to identify conserved functional domains

  • Study of simpler organisms to elucidate basic MPPED2 functions before moving to more complex models

In Drosophila, knockout of dMpped resulted in reduced lifespan, elevated cAMP and cGMP levels in the brain, misregulation of immune pathways, and defective olfactory perception. Importantly, neuronal expression of mammalian MPPED2 restored normal lifespan in dMpped knockout flies, demonstrating functional conservation .

How should researchers address inconsistent MPPED2 detection across different antibodies and experimental systems?

When facing inconsistent MPPED2 detection, consider these troubleshooting approaches:

IssuePotential CausesResolution Strategies
Varying signal intensityEpitope accessibility differencesTest antibodies targeting different epitopes (N-term, C-term)
Cross-reactivity concernsSimilarity to MPPED1Use highly specific antibodies with validated specificity
Tissue-specific detection issuesVariable expression levelsUse brain tissue as positive control; adjust protein loading for low-expressing tissues
Inconsistent molecular weightPost-translational modificationsCompare with recombinant protein standard; use multiple antibodies
Batch-to-batch variabilityManufacturing differencesMaintain records of antibody lot numbers; test new lots against previous ones

Validation protocol recommendation:

  • Start with well-characterized samples (e.g., brain tissue positive control)

  • Compare multiple antibodies targeting different epitopes

  • Verify correlation between protein and mRNA expression levels

  • Include MPPED2-overexpressing cells as additional positive controls

  • Optimize protocol for each specific antibody and application

What are the key considerations when designing experiments to study epigenetic regulation of MPPED2?

MPPED2 downregulation in various cancers has been linked to promoter hypermethylation:

Cancer TypeMethylation ObservationMethodologyReference
GlioblastomaHigher methylation levels compared to LGG and normal brainTCGA dataset analysis, inverse correlation with expression (r = -0.4495)
Breast cancerHypermethylationTargeted bisulfite sequencing
Colorectal cancerDifferential methylationVarious methods

To investigate epigenetic regulation of MPPED2:

  • Analyze promoter methylation status using:

    • Bisulfite sequencing (gold standard for detailed methylation patterns)

    • Methylation-specific PCR (MSP) for targeted analysis

    • Pyrosequencing for quantitative methylation assessment

  • Correlate methylation with expression levels (qRT-PCR, Western blot)

  • Perform demethylation experiments:

    • Treat cells with 5-aza-2'-deoxycytidine (DNA methyltransferase inhibitor)

    • Measure MPPED2 re-expression following treatment

  • Chromatin immunoprecipitation (ChIP) to assess histone modifications

  • Analyze TCGA and other public datasets for correlations between methylation and expression across cancer types

The significant inverse correlation between MPPED2 expression and its promoter methylation in GBM samples (p < 0.0028) provides strong evidence that hypermethylation is a key mechanism of MPPED2 silencing in cancer.

How can researchers effectively study MPPED2's role in modulating sensitivity to chemotherapeutic agents?

Building on findings that MPPED2 restoration enhances temozolomide sensitivity in glioblastoma:

Experimental ApproachKey MeasurementsControlsConsiderations
Cell viability assaysIC50 determinationEmpty vector-transfected cellsUse multiple cell lines to establish consistency
Apoptosis detectionAnnexin V/PI staining, caspase activityCells with/without drug treatmentTime-course analysis to capture dynamics
Pathway analysisPI3K/AKT and NF-kB signalingPathway inhibitor controlsInvestigate MPPED2's effect on multiple survival pathways
Combination therapy testingDrug synergy analysisSingle agent controlsTest MPPED2 restoration with multiple therapeutic agents
In vivo xenograft modelsTumor growth, animal survivalVector control xenograftsTranslate in vitro findings to preclinical models

Methodological recommendations:

  • Generate stable cell lines with inducible MPPED2 expression to control expression timing and levels

  • Perform dose-response curves with multiple chemotherapeutic agents

  • Analyze both short-term (24-72h) and long-term (colony formation) effects

  • Investigate mechanisms through which MPPED2 enhances drug sensitivity:

    • Changes in drug efflux/influx

    • DNA damage response modifications

    • Alterations in apoptotic threshold

    • Effects on PI3K/AKT and NF-kB survival pathways

  • Validate findings across multiple cell lines representing different cancer subtypes

The observed sensitization to temozolomide through MPPED2 overexpression in glioblastoma cells provides a foundation for investigating similar effects with other chemotherapeutic agents and in other cancer types .

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