MRRF Human

Mitochondrial Ribosome Recycling Factor Human Recombinant
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Description

Biological Functions

MRRF operates through three primary mechanisms:

  • Ribosome Recycling: Dissociates 55S mitochondrial ribosomes after translation termination

  • Translation Optimization: Enables ribosome reuse for subsequent translation cycles

  • Quality Control: Works with mitochondrial release factors to ensure proper translation termination

Key interacting partners include:

  • ICT1 (mitochondrial translational release factor)

  • CLPP (mitochondrial protease)

  • Mitochondrial ribosomal proteins L38 and L52

Pathway Involvement

MRRF participates in essential mitochondrial processes:

PathwayAssociated ProteinsRole of MRRF
Mitochondrial TranslationMRPS28, MRPL52, GFM1Recycling 55S ribosomes
Translation TerminationICT1, PTCD3, MRPS30Ribosome-mRNA dissociation
Organelle BiogenesisTTC26, ARL13B, LZTFL1Ribosome pool maintenance

Data from demonstrates MRRF's co-expression with mitochondrial ribosome components (Pearson correlation >0.8 in human tissues).

Research Reagents

Commercially available tools for MRRF studies include:

Recombinant Proteins

VendorCatalog #FormatApplications
ARP American01-P1826His-tagged, E.coliSDS-PAGE, binding studies
Prospec BioPRO-1299Non-glycosylatedStructural biology, enzymatic assays

Antibodies

CloneHostApplicationsReactivity
1D3MouseWB, IHC (p)Human
PAT7D10AMouseELISA, WesternHuman, cross-species

Antibody validation shows >95% specificity in mitochondrial lysates .

Experimental Findings

Recent studies reveal:

  • Chemical Modulation: Valproic acid increases MRRF mRNA expression (2.1-fold) while sodium arsenite decreases it (0.4-fold)

  • Disease Associations: Altered MRRF levels observed in:

    • Mitochondrial encephalopathies

    • Chemotherapy-induced neurotoxicity

    • Bisphenol A-related metabolic disorders

  • Structural Insights: Cryo-EM studies show MRRF binding induces 18° rotation in the ribosomal large subunit, facilitating disassembly

Product Specs

Introduction
Mitochondrial Ribosome Recycling Factor (MRRF), a member of the RRF family, binds to the large ribosomal subunit at the peptidyl transferase center. It regulates the release of ribosomes from messenger RNA upon protein biosynthesis termination and may enhance translation efficiency by facilitating ribosome recycling for subsequent rounds.
Description
Recombinant human MRRF, expressed in E. coli, is a non-glycosylated polypeptide chain comprising 228 amino acids (residues 56-262) with a molecular weight of 25.1 kDa. It includes an N-terminal 21 amino acid His-tag and is purified using proprietary chromatographic techniques.
Physical Appearance
Clear, sterile-filtered solution.
Formulation
MRRF protein solution at a concentration of 0.5 mg/ml in 20 mM Tris-HCl buffer (pH 8.0), 0.2 M NaCl, 30% glycerol, and 2 mM DTT.
Stability
For short-term storage (2-4 weeks), keep at 4°C. For extended periods, store frozen at -20°C. Adding a carrier protein (0.1% HSA or BSA) is recommended for long-term storage. Avoid repeated freeze-thaw cycles.
Purity
Purity exceeds 95.0% as determined by SDS-PAGE analysis.
Synonyms
MRFF, MTRRF, RRF, Ribosome-recycling factor, mitochondrial, Ribosome-releasing factor, mitochondrial.
Source
Escherichia Coli.
Amino Acid Sequence

MGSSHHHHHH SSGLVPRGSH MATKKAKAKG KGQSQTRVNI NAALVEDIIN LEEVNEEMKS VIEALKDNFN KTLNIRTSPG SLDKIAVVTA DGKLALNQIS QISMKSPQLI LVNMASFPEC TAAAIKAIRE SGMNLNPEVE GTLIRVPIPQ VTREHREMLV KLAKQNTNKA KDSLRKVRTN SMNKLKKSKD TVSEDTIRLI EKQISQMADD TVAELDRHLA VKTKELLG.

Q&A

What constitutes "human subjects research" according to regulatory definitions?

Human subjects research has a specific regulatory definition that researchers must understand to determine applicable requirements. According to HHS regulations, human subjects research involves a systematic investigation designed to develop or contribute to generalizable knowledge about living individuals from whom an investigator obtains:

  • Information or biospecimens through intervention or interaction with the individual

  • Identifiable private information or identifiable biospecimens

How do I determine if my project requires IRB review?

To determine if your project requires Institutional Review Board (IRB) review, ask these sequential questions:

  • Does the activity involve research (systematic investigation designed to contribute to generalizable knowledge)?

  • Does the research involve human subjects?

  • Is the human subjects research exempt from IRB review requirements?

Only projects that qualify as non-exempt human subjects research require formal IRB review according to regulatory requirements. This determination process is critical for ensuring appropriate protections while avoiding unnecessary regulatory burden on research activities that don't meet the threshold for IRB oversight .

The HHS Office for Human Research Protections (OHRP) provides decision charts to help investigators navigate these determinations systematically .

What are the key stages of planning human subjects research?

Clinical research planning involves two distinct stages - planning and action - each with critical components:

Planning Stage Components:

  • Problem identification

  • Literature review

  • Research question development

  • Hypothesis formulation

  • Study type determination

  • Study design selection

  • Target population identification

  • Informed consent process planning

  • Expert collaboration establishment

  • Feasibility assessment

  • Data collection strategy development

  • Sampling technique selection

  • Statistical analysis planning

Action Stage Components:

  • Methodology implementation

  • Randomization

  • Blinding procedures

  • Sampling implementation

  • Data collection

  • Statistical analysis

Careful attention to each component during the planning stage helps prevent methodological weaknesses that could compromise study validity and reproducibility.

What are the most common experimental design weaknesses that affect reproducibility?

Recent evidence indicates that many clinical and preclinical studies face reproducibility challenges due to several common weaknesses:

These issues have emerged as major problems affecting the credibility and reproducibility of biomedical research findings . Addressing these weaknesses through rigorous experimental design and transparent reporting is essential for improving research quality.

How should I select an appropriate study design for human research?

Selecting the appropriate study design depends on multiple factors including your research question, hypothesis, objectives, study population, and available resources. For randomized controlled trials (RCTs), several design options exist:

  • Parallel Group Design: Requires large numbers of subjects who are enrolled, followed, and observed over time on a parallel basis. This is the most common design for large clinical trials .

  • Matched Pairs Design: Subjects are matched on key variables before random assignment to intervention or control groups. While more difficult to conduct, this design helps control for confounding variables .

  • Crossover Design: Used for interventions with reversible and transient effects, where subjects receive both interventions sequentially with appropriate washout periods. This design typically requires fewer participants .

The selection should align with your specific research objectives, the nature of the intervention, and the expected effect size, while ensuring statistical validity and minimizing bias .

How can collaborative research models enhance experimental design quality?

The Myelin Repair Foundation (MRF) demonstrated that collaborative research models can significantly enhance experimental design quality and research productivity. By establishing a consortium of researchers with complementary expertise, the MRF created:

  • Cross-disciplinary validation of experimental approaches

  • Shared protocols that improved standardization

  • Combined expertise from oligodendrocyte cell biology, in vitro and in vivo models, immunology, and human pathology

  • Access to state-of-the-art laboratory facilities for testing compounds

  • Support from scientific, clinical, and pharmaceutical advisory boards

This collaborative approach created an "extremely fruitful environment of mutual exchange and advice" that accelerated discoveries and improved methodological consistency . The MRF model transformed potential competitors into collaborators, allowing researchers to identify effective approaches more efficiently than traditional siloed research methods .

What patient selection strategies optimize clinical research validity?

Patient selection should be based on predefined inclusion and exclusion criteria to minimize confounding variables and ensure appropriate population representation:

Effective Inclusion Criteria Elements:

  • Age ranges relevant to the condition studied

  • Body mass index parameters

  • Gender considerations (ensuring appropriate representation)

  • Ethnicity factors (ensuring diversity and representation)

  • Specific diagnostic criteria for the condition under study

  • Prognostic factors relevant to outcomes of interest

Effective Exclusion Criteria Elements:

  • Disease severity parameters outside study scope

  • Concurrent medications that could interfere with study intervention

  • Relevant allergies

  • Underlying health conditions that could confound results

  • Factors that would increase risk to participants

Additionally, predefined withdrawal criteria should specify exactly when and how subjects should be removed from the study, ensuring consistent protocol application across all study participants .

How can biomarker development accelerate translational research?

Biomarker development represents a critical component of accelerating translational research, as exemplified by the Myelin Repair Foundation's work. Effective biomarkers can:

  • Provide objective measures of biological processes or disease states

  • Predict response to therapeutic interventions

  • Monitor treatment efficacy in real-time

  • Stratify patients for more targeted therapeutic approaches

  • Reduce time to clinical endpoints in trials

The MRF specifically focused on identifying biomarkers to help accelerate myelin repair treatments, recognizing their value in bridging the gap between preclinical discoveries and clinical applications . This approach can substantially reduce the time and cost of bringing new therapies to patients by providing earlier indicators of efficacy than traditional clinical endpoints.

What control group strategies are most appropriate for different research questions?

The selection of appropriate control groups is fundamental to scientific validity. Different control strategies offer distinct advantages depending on the research question:

Control TypeDescriptionBest Used When
Placebo ControlSubjects receive an inactive substance identical in appearance to the treatmentTesting interventions where no standard treatment exists or as add-on to standard care
No-Treatment ControlSubjects receive no interventionStudying natural history or when placebo effects are not a concern
Active ControlSubjects receive an established effective treatmentComparing new intervention to current standard of care
Historical ControlData from previous studies or medical records serve as comparisonStudying rare diseases where randomization is impractical or unethical

Randomization remains the optimal method for allocating subjects to different arms of a trial, as it minimizes selection bias and distributes known and unknown confounding factors evenly across groups .

How did the MRF collaborative model accelerate research progress?

The Myelin Repair Foundation pioneered an innovative collaborative approach that significantly accelerated research progress through several key mechanisms:

  • Breaking competitive barriers: The MRF enticed academic researchers who would typically be competitors to collaborate on understanding oligodendrocytes and CNS myelination, focusing their collective expertise on myelin repair .

  • Bridging basic science and drug development: The foundation created mechanisms to ensure research advances were converted to potential new drugs, establishing a clear translational pathway .

  • Research infrastructure development: MRF provided state-of-the-art laboratory facilities for in vitro and in vivo testing of compounds, removing resource barriers for academic researchers .

  • Expert guidance: The foundation assembled scientific, clinical, and pharmaceutical advisory boards with world-renowned leaders to guide research priorities and methodologies .

This collaborative model yielded impressive results, including important discoveries about myelin wrapping mechanisms, new drug targets, novel assays, and drug candidates that advanced to early clinical trials .

What strategies can researchers use to ensure reproducibility in collaborative projects?

Based on the MRF experience and identified weaknesses in research design, successful collaborative projects should implement these reproducibility strategies:

  • Standardized protocols: Develop and share detailed protocols across all participating laboratories to ensure methodological consistency

  • Blinding and randomization procedures: Implement systematic approaches to reduce unintentional bias, particularly for outcome assessments

  • Sample size planning: Conduct appropriate power calculations before beginning experiments to ensure adequate statistical power

  • Independent replication: Have critical findings replicated by different laboratories within the collaboration before publication

  • Data sharing platforms: Establish systems for sharing raw data and analysis methods among collaborators

  • Preregistration of studies: Document hypotheses, methods, and analysis plans before conducting studies to prevent p-hacking and other questionable research practices

These approaches address the common weaknesses in experimental design identified in biomedical research while leveraging the diversity of expertise available in collaborative networks .

How can researchers effectively combine immune regulation and myelin repair approaches in multiple sclerosis research?

The MRF-supported research demonstrated promising approaches for combining immune regulation and myelin repair strategies:

  • Sequential therapeutic targeting: Address both the autoimmune component and promote remyelination through targeted interventions at appropriate disease stages

  • Complementary mechanism exploitation: Pair immune tolerance-based strategies (such as myelin antigen-coupled nanoparticles) with myelin repair enhancing drugs to create synergistic effects

  • Translational biomarker integration: Utilize biomarkers to monitor both immune regulation and remyelination progress simultaneously

This combinatorial approach has shown promise in animal models, leading to reversal of clinical disease symptoms and establishing a framework that may soon be translatable to human treatment . The MRF-funded research specifically demonstrated that pairing established knowledge of immune regulation using myelin antigen-specific tolerance strategies with newly identified myelin repair enhancing drugs created more effective treatment approaches than either strategy alone.

When do HHS Common Rule regulatory requirements apply to research?

HHS Common Rule regulatory requirements apply specifically to nonexempt human subjects research funded by HHS or other Common Rule agencies and departments. The application of these requirements depends on answering three sequential questions:

  • Does the activity involve research (systematic investigation designed to develop or contribute to generalizable knowledge)?

  • If yes, does the research involve human subjects?

  • If yes to both, is the human subjects research exempt from the regulations?

Only when a project qualifies as nonexempt human subjects research do the full regulatory requirements apply, including:

  • IRB review according to regulatory requirements and criteria

  • Informed consent according to regulatory specifications (unless waived)

  • Compliance with additional protections for vulnerable populations (Subparts B, C, and D of 45 CFR 46)

Projects that don't meet these criteria provide investigators with flexibility outside of these specific regulatory requirements, though ethical responsibilities for participants' rights and welfare remain essential in all research contexts .

What resources are available for training in human research protections?

Researchers can access several resources for training in human research protections:

  • OHRP's Human Research Protection Training:

    • Free training program that satisfies NIH requirements for key personnel

    • Five self-study lessons with completion certificates

    • Interactive trainings on IRB review criteria

    • Available at the OHRP website under Education & Outreach

  • Human Subject Regulations Decision Charts:

    • Graphic aids for determining if an activity constitutes human subjects research requiring IRB review

    • Available on the OHRP website

  • About Research Participation resources:

    • Informational materials for the public about participation in research

    • Helps researchers better communicate with potential participants

These resources help ensure researchers understand their regulatory and ethical obligations when designing and conducting human subjects research.

What lessons from the MRF model can be applied to other disease-focused research initiatives?

The MRF's decade-long experience offers valuable lessons for other disease-focused research initiatives:

  • Value of targeted collaboration: By focusing multiple laboratories on complementary aspects of a specific disease process (myelin repair), MRF accelerated discoveries and therapeutic development .

  • Bridging academia and industry: Creating mechanisms to convert basic science findings to drug development pathways proved crucial for translational success .

  • Focused funding impact: Supporting collaborative research on specific disease mechanisms can shift entire research paradigms, as demonstrated by MRF's influence in redirecting MS research toward myelin repair rather than focusing exclusively on immune system interventions .

  • Infrastructure requirements: Providing shared resources like state-of-the-art testing facilities removes barriers to progress for academic researchers .

Despite MRF's impressive track record, the initiative ultimately faced sustainability challenges due to funding limitations. This highlights the need for continuous financial support for collaborative research models to achieve their full translational potential .

How can researchers balance standardization with innovation in collaborative projects?

Successful collaborative research requires balancing standardized methodologies with space for innovation:

  • Core protocol standardization: Establish consensus on fundamental methodological aspects while allowing flexibility in exploratory components

  • Innovation incubators: Designate specific project components where novel approaches are encouraged and supported

  • Hypothesis-driven methodology refinement: Use emerging data to systematically refine methodologies rather than changing approaches arbitrarily

  • Cross-validation requirements: Implement requirements that innovative approaches be validated using standardized methods before widespread adoption

  • Regular methodology review sessions: Schedule periodic collaborative reviews of methods to identify areas where innovation could improve research quality

This balanced approach ensures reproducibility of core findings while creating space for methodological advances that can accelerate research progress.

Product Science Overview

Introduction

The Mitochondrial Ribosome Recycling Factor (mtRRF) is a crucial protein involved in the mitochondrial translation process. It plays a significant role in the disassembly of ribosomes from messenger RNA (mRNA) at the termination of mitochondrial protein biosynthesis . This factor is encoded by the MRRF gene and is essential for maintaining mitochondrial function and cellular viability .

Structure and Function

The mtRRF is a protein that shares similarities with bacterial ribosome recycling factors due to the evolutionary origin of mitochondria from α-proteobacteria . It functions in collaboration with mitochondrial elongation factor 2 (GFM2) to promote the recycling of mitochondrial ribosomes by dissolving intersubunit contacts . This process is vital for the efficient synthesis of mitochondrial proteins, which are integral components of the oxidative phosphorylation system .

Biological Importance

Mitochondria are responsible for producing the majority of cellular ATP through oxidative phosphorylation. The mitochondrial genome encodes 13 essential proteins, along with 22 tRNAs and 2 rRNAs . The synthesis of these proteins occurs on mitoribosomes, which are distinct from cytosolic ribosomes and resemble bacterial ribosomes . The mtRRF ensures the proper recycling of mitoribosomes, preventing their aggregation and maintaining mitochondrial integrity .

Mechanism of Action

The mtRRF binds to the ribosome-mRNA complex at the termination of translation and facilitates the release of the ribosome from the mRNA . This action is crucial for the continuation of protein synthesis cycles within the mitochondria. The recycling process involves the coordinated actions of mtRRF and other mitochondrial translational factors, ensuring the efficient turnover of ribosomes .

Research and Applications

Studies have shown that depletion of mtRRF in human cell lines leads to severe mitochondrial dysfunction, including mitochondrial dysmorphism, aggregation of mitoribosomes, elevated mitochondrial superoxide production, and loss of oxidative phosphorylation complexes . These findings highlight the essential role of mtRRF in maintaining mitochondrial health and cellular viability.

Recombinant human mtRRF is used in research to study mitochondrial translation and its regulation. It provides insights into the mechanisms of mitochondrial diseases and potential therapeutic targets for conditions associated with mitochondrial dysfunction .

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