MSI4 Antibody

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Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
MSI4 antibody; ACG1 antibody; FVE antibody; At2g19520 antibody; F3P11.12 antibody; WD-40 repeat-containing protein MSI4 antibody; Altered cold-responsive gene 1 protein antibody
Target Names
MSI4
Uniprot No.

Target Background

Function
MSI4 is a core histone-binding subunit that plays a crucial role in regulating chromatin structure and function. It interacts with various factors, including chromatin assembly factors, chromatin remodeling factors, and histone deacetylases, facilitating their targeted action on histone substrates. This interaction is modulated by nucleosomal DNA, highlighting the dynamic nature of MSI4's role in chromatin regulation. Moreover, MSI4 is a key component of the flowering autonomous pathway, positively influencing flowering by suppressing the expression of the flowering repressor FLC. This suppression is achieved through the promotion of histone deacetylation at the FLC locus, leading to the formation of repressive chromatin structures. MSI4 forms a histone deacetylase complex with HDA5, HDA6, and FLD, further contributing to the repression of FLC gene expression and the precise control of flowering time. Notably, MSI4 also participates in the negative regulation of cold-responsive genes. In collaboration with PDP1 and MSI5, MSI4 regulates the function of the PRC2 complex on FLC, highlighting its multifaceted involvement in gene regulation and developmental processes.
Gene References Into Functions
  1. Research demonstrates that PTM, a PHD transcription factor implicated in chloroplast retrograde signaling, detects such a signal and mediates transcriptional repression of FLC through the recruitment of FVE (MSI4), a component of the histone deacetylase complex. PMID: 27601637
  2. Data suggests that these newly identified ATMSI4-associated proteins contribute to the formation of nucleoprotein complexes that determine the pleiotropic functional properties of AtMSI4/FVE/ACG1, playing a significant role in plant development. PMID: 25600937
  3. FVE (MSI4) is essential for the HOS1-mediated activation of FLC transcription. PMID: 24220632
  4. Two phospho-beta-galactosidase, LacG1 and LacG2, are the primary enzymes responsible for lactose utilization in Lb. gasseri. PMID: 22449746
  5. Research indicates that two Arabidopsis homologs of the human histone-binding proteins Retinoblastoma-Associated Protein 46/48 (RbAp46/48), known as MSI4 (or FVE) and MSI5, function in partial redundancy in chromatin silencing of various loci targeted by siRNAs. PMID: 22102827
  6. FVE (MSI4), an Arabidopsis homologue of the retinoblastoma-associated protein that regulates flowering time and cold response, binds to chromatin as a large multiprotein complex. PMID: 21710206
  7. These findings suggest that there may be a conserved function between OsFVE and FVE (MSI4) in the control of flowering time. PMID: 18612241

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Database Links

KEGG: ath:AT2G19520

STRING: 3702.AT2G19520.1

UniGene: At.20032

Protein Families
WD repeat RBAP46/RBAP48/MSI1 family
Subcellular Location
Nucleus.
Tissue Specificity
Expressed in rosette leaves, cauline leaves, main stems and developing fruits. Expressed at higher levels in roots and flowers.

Q&A

Here’s a structured collection of FAQs tailored for academic researchers working with MSI4 antibody, synthesized from peer-reviewed methodologies and experimental data:

Advanced Research Questions

  • How to resolve contradictions in MSI4’s role in abiotic stress vs. flowering regulation?
    Experimental design considerations:

    • Temporal analysis: Compare early (0–3 hr) vs. late (8–24 hr) stress responses using time-course RNA-seq .

    • Condition-specific mutants: Combine msi4 mutants with stress-inducible promoters (e.g., cold/mannitol/salt) to isolate context-dependent roles .

    • Table 1: MSI4-associated pathways under distinct stresses :

      Stress ConditionRegulated GenesOverlap with Flowering Pathways
      Cold1,335 genesFLC, FT
      Salt/Mannitol462 genesPRC2 targets
  • What advanced techniques are used to study MSI4’s chromatin remodeling activity?
    Integrate these methods:

    • Bimolecular Fluorescence Complementation (BiFC): Visualize MSI4-DDB1 interactions in vivo (e.g., YN-MSI4 + YC-DDB1A in mustard hypocotyls) .

    • CUL4 depletion assays: Treat plants with proteasome inhibitors (e.g., MG132) to test MSI4’s dependence on CUL4 for chromatin binding .

    • Multi-omics correlation: Pair ChIP-seq data with RNA-seq to link MSI4 binding to transcriptional changes at stress/flowering genes .

Methodological Best Practices

  • How to optimize ChIP protocols for MSI4 in plant tissues?
    Critical steps:

    • Crosslinking: Use 1% formaldehyde for 15 min under vacuum for chromatin fixation.

    • Antibody validation: Pre-clear lysates with Protein A/G beads to reduce non-specific binding .

    • qPCR primers: Design amplicons spanning FLC regions (e.g., promoter, exon 1, intron 1) to assess differential binding .

Data Interpretation Guidelines

  • How to distinguish between direct and indirect MSI4-mediated gene repression?
    Apply these criteria:

    • Direct binding: ChIP enrichment ≥3-fold over IgG control at target loci .

    • Genetic epistasis: Test msi4/clf double mutants for additive vs. synergistic effects on flowering time.

    • Kinetic assays: Monitor H3K27me3 deposition rates at FLC after MSI4 knockdown .

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