NCED6 Antibody

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Description

Definition and Biological Relevance of NCED6

NCED6 is a seed-specific NCED gene in Arabidopsis thaliana that contributes to ABA biosynthesis during seed maturation. Unlike NCED3, which is stress-induced, NCED6 is primarily expressed in the endosperm and embryo during seed development . Mutations in nced6 reduce ABA levels, leading to altered seed dormancy and resistance to paclobutrazol, a gibberellin biosynthesis inhibitor . Overexpression of NCED6 increases ABA accumulation, underscoring its regulatory role .

Applications in Research

NCED6 antibodies enable precise analysis of protein localization, expression, and post-translational modifications. Below are key applications supported by indirect evidence from NCED family studies:

ApplicationMethodologyExample Findings
Protein LocalizationImmunoblotting or immunohistochemistry on seed tissues .NCED6 detected in endosperm and embryo, aligning with seed-specific expression .
Mutant AnalysisComparing NCED6 levels in nced6 mutants vs. wild-type seeds .Reduced NCED6 protein in nced6 mutants correlates with lower ABA and delayed germination .
Post-Translational RegulationMonitoring proteolytic cleavage or phosphorylation .NCED3 undergoes cleavage to form active fragments; NCED6 may exhibit similar processing .
Gene RegulationChIP-seq or RIP-qPCR to identify transcriptional regulators .RZ-1 and PRC2 mediate chromatin silencing of NCED6 during germination .

Role in Seed Dormancy

  • NCED6 and NCED9 are critical for ABA synthesis during seed maturation. Double mutants (nced6 nced9) show reduced dormancy, while overexpression delays germination .

  • Chromatin Silencing: RZ-1 and PRC2 cooperatively silence NCED6 during germination to suppress ABA production, enabling seedling establishment .

Stress and Developmental Regulation

  • ABA Biosynthesis: NCED6 contributes to ABA accumulation in the endosperm, which signals to the embryo to maintain dormancy .

  • Transcriptional Control: MYB96 and DREB2C activate NCED6 in response to dehydration, while bHLH57 regulates NCED9 .

Comparative Insights from NCED3

  • Post-Translational Processing: NCED3 undergoes proteolytic cleavage to form active fragments; NCED6 may share similar regulatory mechanisms .

  • Natural Variation: Polymorphisms in NCED3 affect enzyme activity and ABA levels, suggesting potential functional diversity in NCED6 .

Challenges and Future Directions

  • Specificity Concerns: Cross-reactivity with other NCED isoforms (e.g., NCED3, NCED9) must be addressed via rigorous validation .

  • Quantification: ELISA or LC-MS/MS could complement immunoblotting for precise ABA and NCED6 quantification .

  • Functional Studies: CRISPR-edited NCED6 mutants paired with antibody-based assays could elucidate its role in stress resilience .

References

  1. Progressive chromatin silencing of ABA biosynthesis gene permits...

  2. Induction of 9-cis-epoxycarotenoid dioxygenase in Arabidopsis...

  3. Functional analysis of Arabidopsis NCED6 and NCED9 genes...

  4. Functional analysis of Arabidopsis NCED6 and NCED9 genes...

  5. Natural Variation in 9-Cis-Epoxycartenoid Dioxygenase 3 and ABA...

  6. Natural Variation in 9-Cis-Epoxycartenoid Dioxygenase 3 and ABA...

  7. REVERSAL OF RDO5 1, a Homolog of Rice Seed Dormancy4...

  8. Unveiling the crucial roles of abscisic acid in plant physiology

  9. Progressive chromatin silencing of ABA biosynthesis gene...

  10. High Temperature-Induced Abscisic Acid Biosynthesis and Its Role...

Product Specs

Buffer
**Preservative:** 0.03% Proclin 300
**Constituents:** 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
NCED6 antibody; At3g24220 antibody; MUJ8.129-cis-epoxycarotenoid dioxygenase NCED6 antibody; chloroplastic antibody; AtNCED6 antibody; EC 1.13.11.51 antibody
Target Names
NCED6
Uniprot No.

Target Background

Function
This antibody exhibits 11,12(11',12') 9-cis epoxycarotenoid cleavage activity. It catalyzes the initial step in abscisic acid biosynthesis from carotenoids. This activity likely contributes to abscisic acid synthesis for the induction of seed dormancy.
Gene References Into Functions
  1. Induction of NCED6 expression during seed development suppressed vivipary, the precocious germination of developing seeds. PMID: 21969557
  2. AtNCED6 is essential for abscisic acid biosynthesis during seed development. PMID: 16412079
Database Links

KEGG: ath:AT3G24220

STRING: 3702.AT3G24220.1

UniGene: At.37572

Protein Families
Carotenoid oxygenase family
Subcellular Location
Plastid, chloroplast stroma. Note=Partially bound to the thylakoid.
Tissue Specificity
Expressed before fertilization in male and female gametophytes, and then immediately after pollination, restricted to seed endosperm.

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