cmasb Antibody

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Product Specs

Buffer
**Preservative:** 0.03% Proclin 300
**Constituents:** 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
cmasb antibody; cmas2N-acylneuraminate cytidylyltransferase B antibody; EC 2.7.7.43 antibody; CMP-sialic acid synthetase 2 antibody
Target Names
cmasb
Uniprot No.

Target Background

Function
This antibody catalyzes the activation of 2-keto-3-deoxy-D-glycero-D-galacto-nononic acid (KDN) to cytidine 5'-monophosphate 2-keto-3-deoxy-D-glycero-D-galacto-nononic acid (CMP-KDN), a substrate essential for the addition of sialic acid. It also exhibits weak activity towards N-acetylneuraminic acid (NeuNAc) and N-glycolylneuraminic acid (Neu5Gc).
Gene References Into Functions
  1. This antibody transfers the CMP moiety from CTP to the C2 position of a sialic acid (Sia) to form CMP-Sia and PPi. In vitro studies suggest a strong preference for KDN over Neu5Ac and Neu5Gc. PMID: 22351762
Database Links
Protein Families
CMP-NeuNAc synthase family
Subcellular Location
Cytoplasm.

Q&A

What is the CMSSB antibody and what does it target?

The CMSSB monoclonal antibody specifically recognizes human CD56, also known as Neural Cell Adhesion Molecule (NCAM). CD56 is a highly glycosylated transmembrane molecule primarily expressed by neurons, where it plays a crucial role in homotypic adhesion of neural cells. Within the hematopoietic system, CD56 is predominantly expressed on Natural Killer (NK) cells and a subset of T cells commonly referred to as NKT cells. The CMSSB clone binds to a specific epitope on CD56 that does not interfere with the binding of other CD56 antibody clones such as MEM188 or CB56, making it valuable for multiplexed analyses .

What are the primary research applications for CMSSB antibody?

The CMSSB antibody has been extensively validated for flow cytometric analysis of human samples. It is particularly valuable for immunophenotyping studies focusing on NK cells and NKT cell populations. This antibody has been pre-titrated and tested on normal human peripheral blood cells, allowing researchers to reliably identify CD56-expressing cell populations. The recommended usage is 5 μL (0.125 μg) per test when analyzing 10^5 to 10^8 cells in a final volume of 100 μL .

How does the CMSSB antibody compare to other CD56 antibody clones?

The CMSSB clone has a distinct binding profile compared to other commonly used CD56 antibody clones. Notably, CMSSB binding does not block or interfere with the binding of MEM188 or CB56 clones, suggesting it recognizes a different epitope on the CD56 molecule. This non-competitive binding characteristic makes CMSSB particularly valuable for co-staining experiments where multiple aspects of CD56 biology need to be examined simultaneously .

What are the optimal flow cytometry parameters for CMSSB antibody detection?

For optimal detection of PE-conjugated CMSSB antibody, researchers should use excitation wavelengths between 488-561 nm and measure emission at approximately 578 nm. The antibody performs well with multiple laser configurations including blue, green, and yellow-green lasers. When designing multicolor panels, researchers should consider spectral overlap with other fluorochromes and implement appropriate compensation controls. The antibody has undergone 0.2 μm post-manufacturing filtration to ensure optimal performance and minimal background in flow cytometric applications .

How should researchers validate CMSSB antibody performance in new experimental systems?

When implementing CMSSB antibody in a new experimental system, researchers should first conduct titration experiments to determine the optimal antibody concentration for their specific cell type and experimental conditions. While the recommended starting concentration is 5 μL (0.125 μg) per test, this may require adjustment based on cell type, buffer composition, and instrument sensitivity. Validation should include appropriate isotype controls to confirm specificity and staining index calculations to quantify signal-to-noise ratios. Researchers should also perform blocking experiments with unlabeled antibody to confirm target specificity and consider cross-validation with alternative CD56 antibody clones .

What sample preparation techniques maximize CMSSB antibody performance?

For optimal CMSSB antibody performance, samples should be processed promptly after collection to maintain cellular integrity. Fresh samples typically yield superior results compared to frozen samples, though properly cryopreserved peripheral blood mononuclear cells (PBMCs) can also be used effectively. Sample preparation should include red blood cell lysis for whole blood analyses, and consistent washing steps to reduce background staining. For intracellular applications, researchers should validate fixation and permeabilization protocols to ensure they do not disrupt the CD56 epitope recognized by CMSSB. Additionally, blocking steps with serum matched to the secondary detection system can reduce non-specific binding .

How can CMSSB antibody be integrated into systems for monoclonal antibody discovery?

The CMSSB antibody can be incorporated into advanced antibody discovery platforms that integrate microfluidics and flow cytometry. Similar to approaches described for SARS-CoV-2 antibody discovery, researchers can encapsulate single antibody-secreting cells (ASCs) into antibody capture hydrogels using droplet microfluidics. These cells can then be interrogated for CD56-specific binding using fluorescently-labeled antigens and isolated by FACS. This approach facilitates high-throughput screening of millions of primary immune cells, enabling the identification of highly specific anti-CD56 antibodies. The technology can process up to 10^7 cells per hour, making it suitable for extensive repertoire screening projects .

What are the considerations for using CMSSB antibody in multiparameter analyses of neural and immune cell interactions?

When designing multiparameter analyses to study neural-immune interactions, researchers should consider that CD56 is expressed on both neural cells and specific immune populations. This dual expression pattern requires careful panel design and gating strategies to distinguish between different CD56-expressing cell types. Researchers should incorporate additional lineage markers (e.g., CD3, CD16 for immune cells; neuron-specific markers for neural cells) to accurately classify cell populations. Additionally, the polysialic acid modification of CD56, which reduces cell adhesion properties, should be considered when interpreting results, as this modification can vary between cell types and activation states. Integration of CMSSB with antibodies targeting functional markers can provide insights into the role of CD56 in cell migration, axonal growth, and synaptic plasticity in both neural and immune contexts .

What methodological approaches allow researchers to study CD56 in tumor microenvironments using CMSSB antibody?

To effectively study CD56 in tumor microenvironments, researchers can employ multiplexed imaging approaches that incorporate CMSSB antibody alongside other tumor and immune cell markers. Tissue sections should undergo optimized antigen retrieval and blocking to prevent non-specific binding. For fresh tumor samples, gentle dissociation techniques that preserve CD56 epitopes are essential prior to flow cytometric analysis with CMSSB. Since CD56 is a widely used neuroendocrine marker with high sensitivity for neuroendocrine tumors and ovarian granulosa cell tumors, researchers should design experiments that can distinguish between tumor-derived and immune-derived CD56 expression. Quantitative analysis should include spatial distribution patterns of CD56+ cells relative to other components of the tumor microenvironment to understand potential functional interactions .

How should researchers address inconsistent staining patterns with CMSSB antibody?

Inconsistent staining patterns with CMSSB antibody can result from several factors. Researchers should first verify antibody integrity by checking for signs of aggregation or precipitation. Storage conditions should be evaluated, as repeated freeze-thaw cycles can compromise antibody performance. Experimental variables such as incubation time, temperature, and buffer composition should be standardized. If issues persist, researchers should perform titration experiments across different cell types to determine if the inconsistency is cell-type specific. CD56 expression can be modulated by activation status and cytokine exposure, so experimental conditions that might alter CD56 expression should be controlled. Additionally, researchers should consider that polysialic acid modifications of CD56 can affect antibody binding, potentially resulting in variable staining intensity between different cell populations or activation states .

What are the best approaches for quantifying CD56 expression levels using CMSSB antibody?

For accurate quantification of CD56 expression using CMSSB antibody, researchers should implement calibration standards such as antibody-binding capacity (ABC) beads to convert fluorescence intensity into absolute molecules per cell. This approach allows for standardization across experiments and instruments. When analyzing heterogeneous populations, density plots rather than single-parameter histograms provide better resolution of distinct CD56-expressing subsets. For longitudinal studies, fluorescence intensity should be normalized to stable reference populations or calibration standards to account for instrument variation. Researchers should also be aware that CD56 can exist in multiple isoforms (120-180 kDa) due to differential glycosylation, which may affect binding kinetics and should be considered when interpreting quantitative data .

How can researchers distinguish between specific and non-specific binding when using CMSSB antibody?

To distinguish between specific and non-specific binding, researchers should implement a comprehensive control strategy. This includes matched isotype controls to assess Fc receptor-mediated binding and fluorescence-minus-one (FMO) controls to establish accurate gating boundaries. Blocking experiments with unlabeled CMSSB antibody can confirm binding specificity through competitive inhibition. Additionally, researchers should validate results using alternative CD56 antibody clones that recognize different epitopes. For tissues known to express CD56, such as neural tissues or specific tumors, researchers should include positive control samples to establish expected staining patterns. Non-specific binding can be further minimized by optimizing sample preparation protocols, including adequate blocking steps and appropriate wash procedures .

How might CMSSB antibody be utilized in bispecific antibody development?

CMSSB antibody could serve as a foundation for developing novel bispecific antibodies (BsAbs) targeting CD56 along with a second target of interest. Similar to approaches used in oncology research, scientists could engineer BsAbs that combine CD56 targeting with recognition of tumor-specific antigens to redirect NK cells or T cells to tumors. When designing such constructs, researchers must consider molecular format options (such as DVD-Ig or KIH configurations) which significantly impact binding affinity and biological activity. Based on comparative studies of BsAb formats, DVD-Ig structures might offer advantages due to their molecular flexibility and ability to bind multiple antigen molecules simultaneously. Researchers developing CD56-directed BsAbs should employ multiple assay systems (cell viability, proliferation, cytotoxicity) across different cell lines to comprehensively characterize potency and mechanism of action .

What considerations are important when adapting CMSSB antibody for imaging applications?

When adapting CMSSB antibody for imaging applications, researchers must consider several technical aspects. Direct fluorophore conjugation should be optimized to maintain binding affinity while providing sufficient signal intensity for the imaging modality of choice. For tissue imaging, researchers should determine optimal fixation and permeabilization conditions that preserve the CD56 epitope recognized by CMSSB. Penetration depth limitations in tissue sections may require optimization of antibody concentration and incubation times. For in vivo imaging applications, researchers should evaluate pharmacokinetic properties of labeled CMSSB antibody and consider potential background in organs with endogenous CD56 expression. Multiplexed imaging approaches should include careful spectral unmixing to distinguish CMSSB signals from autofluorescence and other fluorophores .

How can CMSSB antibody contribute to the study of CD56's role in synaptic plasticity and neural development?

To study CD56's role in synaptic plasticity and neural development using CMSSB antibody, researchers can implement live-cell imaging techniques to track CD56 dynamics during neural network formation. Co-localization studies incorporating CMSSB alongside markers for synaptic structures can reveal spatial relationships during developmental processes. Functional assays combining CMSSB-mediated CD56 engagement with electrophysiological measurements can elucidate the molecule's role in synaptic transmission. Since CD56 mediates both homophilic interactions and heterophilic binding with extracellular matrix components such as laminin and integrins, researchers should design experiments that can distinguish between these different interaction modes. Understanding how polysialic acid modifications regulate CD56-mediated adhesion is particularly important, as these modifications dynamically change during development and in response to neural activity .

What emerging technologies might enhance CMSSB antibody applications in single-cell analysis?

Emerging single-cell technologies offer promising avenues to enhance CMSSB antibody applications. Integration with single-cell RNA sequencing could correlate CD56 protein expression detected by CMSSB with transcriptomic profiles at the individual cell level. Microfluidic approaches similar to those used for antibody discovery could be adapted to study CD56+ cells isolated using CMSSB antibody, enabling high-throughput functional characterization. Mass cytometry (CyTOF) integration would allow researchers to incorporate CMSSB into highly multiplexed panels with 40+ parameters, providing unprecedented resolution of CD56+ cell heterogeneity. Additionally, emerging spatial transcriptomics platforms could be combined with CMSSB immunostaining to correlate CD56 protein localization with gene expression patterns in intact tissue sections, providing insights into the spatial context of CD56 function .

How might artificial intelligence and machine learning advance the analysis of CMSSB antibody-generated data?

Artificial intelligence and machine learning approaches can significantly enhance the analysis of complex data generated using CMSSB antibody. Deep learning algorithms can be trained to identify subtle CD56 expression patterns across heterogeneous cell populations that might be missed by conventional gating strategies. Unsupervised clustering methods can reveal novel CD56+ cell subsets with distinct functional properties. For imaging data, convolutional neural networks can automate the identification and quantification of CD56+ structures and their spatial relationships with other cellular components. Machine learning models can also integrate CMSSB antibody staining patterns with other experimental parameters to predict functional outcomes or disease states. Researchers should implement appropriate cross-validation strategies and consider model interpretability to ensure robust and biologically meaningful results .

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