NIC2 Antibody

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Product Specs

Buffer
Preservative: 0.03% ProClin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
14-16 weeks (Made-to-order)
Synonyms
NIC2 antibody; At5g23230 antibody; MKD15.9 antibody; Nicotinamidase 2 antibody; AtNIC2 antibody; EC 3.5.1.19 antibody; Nicotinamide deamidase 2 antibody
Target Names
NIC2
Uniprot No.

Target Background

Function
This antibody targets nicotinamidase, an enzyme catalyzing the deamidation of nicotinamide, a crucial early step in the NAD+ salvage pathway. By preventing nicotinamide accumulation—a known inhibitor of poly(ADP-ribose) polymerases (PARP enzymes)—this enzyme likely plays a regulatory role in cellular function. Evidence suggests a role in seed germination potential.
Gene References Into Functions
  • A study demonstrated reduced nicotinamidase activity, retarded germination, and impaired germination potential in the seeds of a knockout mutant. PMID: 17587307
Database Links

KEGG: ath:AT5G23230

STRING: 3702.AT5G23230.1

UniGene: At.31020

Protein Families
Isochorismatase family

Q&A

What are NR2 antibodies and how do they function in neurological pathways?

Anti-NR2 antibodies (anti-N-methyl-D-aspartic acid receptor 2 antibodies) are autoantibodies that target the NR2 subunit of NMDA receptors in the central nervous system . These antibodies function by cross-reacting with DNA and the NR2 subunit, potentially triggering neuronal damage through apoptotic pathways . The pathogenic mechanism involves antibody binding to the extracellular domains of NMDA receptors, which can alter receptor function and density on the neuronal surface . In systemic lupus erythematosus (SLE), these antibodies have been identified as potentially significant mediators of neuropsychiatric manifestations, particularly when they gain access to the central nervous system . Their functional activity can mimic aspects of glutamate receptor activation or antagonism, depending on the specific epitope binding and concentration of antibodies present in the system .

How are NR2 antibodies detected and quantified in experimental settings?

NR2 antibodies are typically detected and quantified using enzyme-linked immunosorbent assays (ELISA) with recombinant NR2 proteins or synthetic peptides corresponding to the extracellular domains of the NR2 subunit . In research settings, serum and cerebrospinal fluid (CSF) samples are analyzed using established ELISA techniques with carefully validated cutoff values to determine positivity . The detection protocols generally involve coating plates with the target antigen, incubating with patient samples at various dilutions, and developing with secondary antibodies conjugated to enzymes that produce colorimetric or fluorescent signals . Quantification requires comparison against standard curves generated with known concentrations of anti-NR2 antibodies. Western blotting can provide complementary information about specificity by showing the molecular weight of the target antigens recognized by the antibodies . More advanced techniques may include immunohistochemistry on brain tissue sections or cell-based assays using cells transfected with NR2 subunits to assess functional binding under physiological conditions.

What is the prevalence of anti-NR2 antibodies in different neuropsychiatric conditions?

The prevalence of anti-NR2 antibodies varies significantly across different neuropsychiatric conditions. In systemic lupus erythematosus (SLE), approximately 30% of patients test positive for serum anti-NR2 antibodies . While these antibodies have been associated with neuropsychiatric manifestations of SLE, there is notable variability in their clinical correlation . Studies have shown that anti-NR2 antibodies in cerebrospinal fluid correlate more strongly with diffuse psychiatric/neuropsychological SLE than serum antibodies . Interestingly, serum anti-NR2 antibodies have demonstrated associations with depression in SLE patients rather than cognitive dysfunction . In contrast to the inconsistent correlation with cognitive impairment, these antibodies appear in the serum of various autoimmune conditions, suggesting their presence may have broader implications beyond SLE-related neuropsychiatric manifestations . The prevalence data highlights the complex relationship between antibody presence and clinical manifestations, emphasizing the need for contextual interpretation of serological findings.

What experimental models exist for studying anti-NR2 antibody effects on neural cells?

Several experimental models have been developed to study the effects of anti-NR2 antibodies on neural cells. In vitro models include primary cultures of rat brain microvessel endothelial cells, which are used to evaluate blood-brain barrier integrity and permeability when exposed to anti-NR2 antibodies . These cell culture-based BBB models allow researchers to assess the direct effects of antibodies on endothelial tight junctions and transport mechanisms. Neuronal cell cultures provide another important model system where researchers can study the direct effects of anti-NR2 antibodies on neuronal viability, dendritic spine morphology, and electrophysiological properties . Animal models, particularly mice injected with anti-NR2 antibodies, have been instrumental in understanding the in vivo effects of these antibodies on cognitive function and behavior . These models typically involve either direct intrathecal administration of antibodies or peripheral injection combined with procedures to disrupt the blood-brain barrier, mimicking the proposed pathogenic mechanisms in human disease . Transgenic mouse models expressing human autoantibodies have also contributed to understanding the long-term effects of chronic exposure to these antibodies on brain development and function.

How do researchers differentiate between pathogenic and non-pathogenic anti-NR2 antibodies?

Differentiating between pathogenic and non-pathogenic anti-NR2 antibodies requires multiple experimental approaches that assess both binding characteristics and functional outcomes. Researchers employ epitope mapping techniques to determine the specific binding regions within the NR2 subunit, as antibodies targeting different epitopes may have distinct pathogenic potential . Functional assays measuring calcium influx, electrophysiological changes, or apoptotic markers in neuronal cultures provide direct evidence of pathogenicity . The ability of antibodies to induce neuronal death or alter synaptic transmission in vitro strongly suggests pathogenic potential. In vivo studies assessing cognitive or behavioral changes following antibody administration represent the gold standard for establishing pathogenicity . The blood-brain barrier (BBB) context is crucial - antibodies may demonstrate pathogenicity only when they can access the brain parenchyma, either through BBB disruption or intrathecal administration . Isotype analysis also provides important information, as different antibody isotypes (IgG vs. IgM, or IgG subclasses) may have different complement-activating or effector functions that influence pathogenicity. Lastly, clinical correlations comparing antibody characteristics between symptomatic and asymptomatic patients help distinguish functionally relevant antibody populations.

What are the methodological challenges in studying anti-NR2 antibody-mediated blood-brain barrier disruption?

Studying anti-NR2 antibody-mediated blood-brain barrier disruption presents several methodological challenges. First, developing physiologically relevant in vitro BBB models that accurately recapitulate the complexity of the neurovascular unit is difficult . Most cell culture models lack the three-dimensional architecture and cellular diversity of the intact BBB, potentially limiting their predictive value. Second, quantifying BBB integrity requires reliable markers that may themselves be subject to variability; researchers often use S100B protein as a biomarker of BBB disruption, but interpreting elevated levels can be complicated by other factors affecting S100B release . Third, the temporal dynamics of BBB disruption make experimental timing critical - transient BBB opening may be missed in both clinical and experimental settings . Fourth, distinguishing between antibody-mediated BBB disruption and BBB disruption caused by other inflammatory mediators in complex disease states presents a significant challenge . Standardizing experimental conditions across different laboratories remains difficult, affecting reproducibility of findings. Finally, translating findings from animal models to human pathophysiology is complicated by species differences in BBB structure, NMDA receptor composition, and immune system function. These challenges necessitate multi-modal approaches combining in vitro models, animal studies, and careful clinical investigations with appropriate controls.

How does the blood-brain barrier influence the pathogenicity of anti-NR2 antibodies?

The blood-brain barrier (BBB) plays a crucial role in determining the pathogenicity of anti-NR2 antibodies. Research has demonstrated that anti-NR2 antibodies can cause memory impairment and neuronal damage, but this effect is primarily observed when the BBB is compromised or when antibodies are administered intrathecally . In animal models, anti-NR2 antibodies injected peripherally cause no cognitive deficits unless there is concurrent BBB disruption . This suggests that in clinical settings, the presence of anti-NR2 antibodies in serum alone may be insufficient to cause neuropsychiatric symptoms without accompanying BBB dysfunction . The present study indicates that anti-NR2 antibodies in neuropsychiatric lupus serum can damage the BBB themselves, potentially creating a pathogenic feedback loop where initial BBB disruption allows antibody entry, leading to further BBB damage and increased antibody penetration . Biomarkers of BBB integrity, such as S100B protein and anti-S100B antibodies, have been investigated as potential indicators of BBB disruption that might identify patients at higher risk for anti-NR2 antibody-mediated neurological effects . This BBB-dependent pathogenicity explains the inconsistent correlation between serum anti-NR2 antibody levels and cognitive dysfunction in clinical studies.

How do researchers account for confounding variables when studying anti-NR2 antibodies in clinical populations?

Researchers employ multiple strategies to account for confounding variables when studying anti-NR2 antibodies in clinical populations. Demographic factors such as age, ethnicity, and socioeconomic status are documented and incorporated into statistical analyses, as these have been shown to significantly differ between cognitive dysfunction and non-cognitive dysfunction groups . Multiple regression models are utilized to adjust for these variables when assessing the relationship between antibody presence and clinical outcomes . Disease-related confounders, including disease duration, activity scores, and other autoantibody profiles, are similarly controlled for in statistical analyses . Medication effects, particularly immunosuppressants and psychotropic drugs that may influence both antibody levels and cognitive function, are documented and considered as potential confounders . Neuroimaging findings are integrated when available to account for structural brain abnormalities that might independently affect cognitive performance. Blood-brain barrier integrity is assessed using biomarkers such as S100B protein and anti-S100B antibodies to determine whether peripheral antibodies have access to the central nervous system . Neuropsychological testing protocols are standardized and compared against appropriate control populations, such as age-, sex-, and race-matched rheumatoid arthritis patients rather than healthy controls, to account for the non-specific effects of chronic inflammatory disease . This comprehensive approach to addressing confounders strengthens the validity of findings regarding anti-NR2 antibody pathogenicity.

How do structural characteristics of antibodies influence their ability to penetrate the blood-brain barrier?

The structural characteristics of antibodies significantly influence their ability to penetrate the blood-brain barrier (BBB). Full-length IgG antibodies (approximately 150 kDa) have limited BBB penetration under normal conditions due to their large size and hydrophilic nature . Research indicates that only about 0.1% of peripherally administered IgG reaches the central nervous system under normal conditions. Antibody charge plays a crucial role, with cationized antibodies demonstrating enhanced BBB penetration through adsorptive-mediated transcytosis. Glycosylation patterns affect antibody-receptor interactions at the BBB, with specific glycoforms showing differential brain uptake. The presence of specific amino acid sequences that interact with BBB transporters can facilitate receptor-mediated transcytosis. Antibody fragments (Fab, F(ab')2, single-chain variable fragments) demonstrate enhanced BBB penetration compared to full-length antibodies due to their reduced size and altered physicochemical properties . Engineering approaches including the incorporation of BBB shuttle peptides or targeting moieties that bind transferrin receptors, insulin receptors, or low-density lipoprotein receptors have shown promise for enhancing antibody delivery across the BBB. Understanding these structural determinants is essential for developing therapeutic antibodies targeting central nervous system disorders and for interpreting the pathogenicity of autoantibodies such as anti-NR2 in neuropsychiatric conditions.

What techniques are available for monitoring antibody-mediated changes in neuronal function in real-time?

Monitoring antibody-mediated changes in neuronal function in real-time involves sophisticated techniques spanning electrophysiology, imaging, and molecular approaches. Patch-clamp electrophysiology remains the gold standard for assessing immediate changes in neuronal excitability, synaptic transmission, and ion channel function following antibody exposure . Microelectrode array (MEA) recordings offer the advantage of monitoring network-level activity across multiple neurons simultaneously, providing insights into circuit-level effects of antibodies. Calcium imaging using fluorescent indicators such as Fluo-4 or genetically encoded calcium indicators (GECIs) enables visualization of intracellular calcium flux - a critical second messenger in NMDA receptor signaling - across populations of neurons with excellent spatial resolution . Voltage-sensitive dye imaging similarly allows for monitoring of membrane potential changes across neuronal populations. For in vivo applications, fiber photometry and miniscope imaging permit real-time monitoring of genetically defined neuronal populations in behaving animals exposed to antibodies. Optogenetic approaches can be combined with these techniques to manipulate specific neuronal populations while simultaneously assessing antibody effects. Molecular FRET (Förster Resonance Energy Transfer) sensors designed to detect conformational changes in receptors or downstream signaling molecules provide direct insight into the molecular consequences of antibody binding. These complementary approaches collectively enable comprehensive assessment of antibody effects across multiple levels of neuronal organization, from molecular interactions to behavioral outcomes.

How might anti-NR2 antibody research inform development of therapeutic approaches for neuropsychiatric conditions?

Anti-NR2 antibody research holds significant potential for informing therapeutic approaches for neuropsychiatric conditions. Understanding the mechanisms by which these antibodies disrupt neuronal function can identify novel therapeutic targets beyond the antibodies themselves . Development of small molecule inhibitors that block antibody binding to NR2 receptors without affecting normal glutamatergic signaling represents one promising approach . Blood-brain barrier (BBB) stabilization therapies may prevent antibody access to the central nervous system, potentially attenuating neuropsychiatric symptoms in conditions like systemic lupus erythematosus . The discovery that anti-NR2 antibodies can themselves damage the BBB suggests that early intervention with BBB-protective agents might prevent the establishment of a pathogenic feedback loop . Selective immunoadsorption techniques could potentially remove pathogenic antibodies from circulation while sparing protective antibodies. Intrathecal administration of decoy receptors or peptide mimetics might neutralize antibodies already present in the cerebrospinal fluid. Neuroinflammation modulation approaches targeting downstream effects of antibody binding could ameliorate symptoms even when antibodies persist. Importantly, the refinement of biomarkers indicating BBB disruption could identify patients most likely to benefit from these targeted interventions . As research elucidates the relationship between antibody characteristics and pathogenicity, personalized therapeutic approaches based on individual antibody profiles may become feasible for treating antibody-mediated neuropsychiatric conditions.

What are the emerging techniques for tracking antibody transport across the blood-brain barrier in vivo?

Emerging techniques for tracking antibody transport across the blood-brain barrier (BBB) in vivo have significantly advanced our understanding of antibody pharmacokinetics and pathogenicity. Positron emission tomography (PET) imaging using radiolabeled antibodies (with isotopes such as 89Zr, 124I, or 64Cu) provides quantitative, real-time visualization of antibody distribution throughout the brain with excellent sensitivity . Near-infrared fluorescence (NIRF) imaging with appropriately labeled antibodies offers high-throughput screening of BBB penetration in small animal models, though with limited depth penetration. Intravital two-photon microscopy enables direct visualization of fluorescently labeled antibodies as they interact with and cross the BBB at the cellular level, providing unprecedented spatial and temporal resolution of transport mechanisms . Mass spectrometry imaging (MSI) techniques such as MALDI-MSI allow for label-free detection of antibodies in brain tissue sections with high molecular specificity. Cerebrospinal fluid (CSF) sampling via microdialysis permits continuous monitoring of antibody levels in the central nervous system with minimal disruption to BBB integrity. Genetically encoded sensors expressed in BBB endothelial cells can report on transcytosis events in real-time when combined with appropriate imaging modalities. CRISPR-Cas9 gene editing approaches facilitating the expression of reporter-tagged transporters provide new opportunities to study receptor-mediated transcytosis mechanisms. These complementary techniques collectively enhance our ability to understand the dynamic process of antibody transport across the BBB in both normal and pathological conditions.

How do machine learning approaches enhance antibody design for challenging epitope targets?

Machine learning approaches have revolutionized antibody design for challenging epitope targets by enabling more precise prediction and optimization of binding characteristics. Modern computational methods can analyze high-throughput sequencing data from phage display experiments to identify patterns associated with specific binding profiles, even when dealing with extremely similar epitopes . These sophisticated algorithms successfully disentangle different binding modes associated with particular ligands, a critical capability when target epitopes cannot be experimentally isolated from other epitopes present during selection . The computational models demonstrate remarkable success in designing antibodies with customized specificity profiles - either with targeted high affinity for specific ligands or with intentional cross-reactivity across multiple targets . This approach extends beyond the limitations of experimental selection alone, which is constrained by library size and offers limited control over specificity profiles . By incorporating structural modeling alongside sequence-based predictions, machine learning frameworks can optimize antibody sequences for properties beyond binding affinity, including stability, solubility, and manufacturability. Reinforcement learning algorithms iteratively refine designs based on experimental feedback, creating a continuous improvement cycle. These computational approaches significantly accelerate the development timeline for antibodies against challenging targets by reducing the experimental space that needs to be physically explored, ultimately enabling the creation of highly specific research reagents and therapeutic candidates for previously intractable targets.

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