orc-2 Antibody

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Description

Introduction to ORC2 Antibody

The ORC2 antibody is a monoclonal or polyclonal antibody targeting the Origin Recognition Complex subunit 2 (ORC2), a critical component of the eukaryotic DNA replication machinery . ORC2 is part of the six-subunit Origin Recognition Complex (ORC1-6), which binds to replication origins to initiate DNA replication by recruiting CDC6, CDT1, and the MCM2-7 helicase . Antibodies against ORC2 enable researchers to study its localization, interactions, and regulatory roles in DNA replication, heterochromatin organization, and mitosis .

Biological Significance of ORC2

ORC2 plays essential roles beyond DNA replication initiation:

  • Heterochromatin Stability: ORC2 localizes to centromeres and telomeres, interacting with heterochromatin proteins (e.g., HP1α) to maintain chromatin compaction . Depletion causes heterochromatin decondensation and abnormal nuclear morphology .

  • Mitotic Regulation: ORC2 is required for proper chromosome segregation. Knockdown leads to mitotic defects, including lagging chromosomes and micronuclei .

  • Cell Cycle Checkpoints: Reduced ORC2 levels trigger replication stress, DNA damage, and G2/M arrest via ATM/CHK1 activation .

Development and Validation of ORC2 Antibodies

Key ORC2 antibodies and their properties:

Antibody NameHostApplicationsSpecificitySource
ORC2 (3G6) Rat mAb #4736RatWB, IP, IFEndogenous ORC2; no cross-reactivity Cell Signaling
ORC2 (4D4)MouseIF, WB (C. elegans)Recognizes C. elegans ORC2 DSHB
Anti-ORC2 (ab96249)RabbitWB, IHCHuman ORC2 (aa 200–450) Abcam
ORC2 Monoclonal AntibodyMouseWBHuman ORC2 (validated in WB) Diagenode

Validation Methods:

  • Western Blot: Detects ORC2 at ~78 kDa in human cells .

  • Immunofluorescence: Localizes ORC2 to centrosomes, centromeres, and heterochromatin foci .

  • Functional Knockdown: siRNA or CRISPR/Cas9 depletion confirms antibody specificity via loss of ORC2 signal .

DNA Replication Studies

  • Pre-Replication Complex (pre-RC) Assembly: ORC2 antibodies confirm ORC2’s role in loading MCM2-7 onto chromatin . Depletion reduces MCM2-7 chromatin association by 50–80% .

  • Replication Stress: ORC2-deficient cells exhibit elevated γH2AX (DNA damage marker) and CHK1 activation .

Mitotic Regulation

  • Chromosome Segregation: ORC2 depletion causes lagging chromosomes and micronuclei due to centromeric α-satellite decondensation .

  • Cell Cycle Synchronization: Antibodies track ORC2 dynamics during G1/S transition and mitosis .

Epigenetic Studies

  • Heterochromatin Interaction: Co-immunoprecipitation with HP1α and CENP-C demonstrates ORC2’s role in maintaining heterochromatin structure .

Cancer Biomarker Potential

ORC2 expression correlates with tumor progression in lung adenocarcinoma (LUAD):

Pathological ParameterORC2 Expression (High vs. Low)p-value
Lymph Node Metastasis23 vs. 70.0032
TNM Stage (III–IV vs. I–II)5 vs. 250.2649
Recurrence14 vs. 80.3552

Data source: LUAD patient cohort analysis .

Immune Infiltration

ORC2 expression inversely correlates with CD8+ T cells (p = 4.45e−07) and neutrophils (p = 9.39e−05), suggesting immune microenvironment modulation in cancer .

Key Research Findings

  • ORC2 Depletion Survival: Human cells (HCT116, 293T) survive ORC2 knockout but exhibit slowed replication fork progression (~1.5 kb/min vs. 1.2 kb/min in wild type) .

  • Phosphorylation Dynamics: Cyclin A-CDK2 phosphorylates ORC2 at Thr-116/226 during S phase, dissociating ORC from chromatin .

  • ORCA Stabilization: ORC2 binding prevents ubiquitin-mediated degradation of ORCA/LRWD1, a pre-RC component .

Product Specs

Buffer
**Preservative:** 0.03% Proclin 300
**Constituents:** 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
orc-2 antibody; F59E10.1 antibody; Origin recognition complex subunit 2 antibody; CeOrc2 antibody
Target Names
orc-2
Uniprot No.

Target Background

Function
ORC-2 Antibody is a component of the origin recognition complex (ORC), which binds to origins of replication. The binding process is ATP-dependent, but specific DNA sequences defining origins of replication have not been identified yet. ORC plays a crucial role in assembling the pre-replication complex, which is essential for initiating DNA replication.
Database Links

KEGG: cel:CELE_F59E10.1

STRING: 6239.F59E10.1.2

UniGene: Cel.7311

Protein Families
ORC2 family
Subcellular Location
Nucleus.

Q&A

Here’s a structured collection of FAQs tailored for academic researchers working with ORC-2 antibodies, synthesized from peer-reviewed studies and technical documentation:

Advanced Research Questions

How to resolve contradictions in ORC-2’s dispensability for DNA replication?

  • Data conflict analysis:

    StudyFindingMethodResolution Strategy
    Shibata et al. (2016) ORC2 is dispensable for replication in knockout cellsCRISPR/Cas9 + DNA combingTest redundancy with ORC1/ORC3 via double knockouts
    PNAS (2011) ORC2 critical for Xi silencingshRNA + RNA FISH/XIST trackingContext-dependent roles (replication vs. heterochromatin)

What advanced techniques characterize ORC-2’s interaction with heterochromatin?

  • Integrated workflow:

    • CUT&RUN: Map ORC-2 binding sites at Xi using H3K27me3 as a guide .

    • Proximity ligation (PLA): Confirm physical interaction with HP1α .

    • Live-cell imaging: Track ORC-2 dynamics during cell cycle progression (e.g., FUCCI system) .

How to address non-specific binding in ORC-2 Western blots?

  • Troubleshooting table:

    IssueSolutionRationale
    Multiple bandsPre-adsorb antibody with ORC2 peptide (10-fold molar excess) Blocks cross-reactivity
    SmearingUse fresh protease inhibitors (e.g., PMSF/Aprotinin)Prevents chromatin degradation
    Weak signalIncrease SDS-PAGE gel concentration (12%)Improves separation of 72 kDa ORC2

Data-Driven Insights

How does ORC-2 depletion affect epigenomic stability?

  • Findings:

    • Gene reactivation: 3–5-fold upregulation of HPRT and PGK1 in female cells .

    • Heterochromatin integrity: No change in H3K27me3/H4K20me3 levels, but HP1α mislocalization occurs .

    • Replication stress: Increased γH2AX foci in ORC2-depleted S-phase cells (p < 0.01) .

What orthogonal methods confirm ORC-2’s role in licensing?

  • Validation pipeline:

    • DNA combing: Measure replication fork progression in ORC2-knockout vs. wild-type .

    • ATAC-seq: Compare chromatin accessibility at licensed vs. unlicensed origins .

    • EdU pulse-chase: Quantify replication timing defects .

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