OTC Human

Ornithine Carbamoyltransferase Human Recombinant
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Description

Ornithine Transcarbamylase (OTC): Biochemical Role and Structure

OTC is an X-linked enzyme that catalyzes the conversion of carbamoyl phosphate and ornithine to citrulline in the urea cycle, critical for ammonia detoxification . Structurally, it is a homotrimeric protein with a catalytic site requiring carbamoyl phosphate and ornithine binding .

OTC deficiency is an X-linked disorder causing ammonia accumulation, primarily affecting males. Females carriers may exhibit later-onset symptoms due to X-inactivation patterns .

Biochemical Markers of OTC Deficiency

MarkerNeonatal-Onset (Males)Late-Onset (Males/Females)
Plasma Ammonia> 500 μmol/L40–258 μmol/L
Serum Glutamine> 1,000 μmol/L462–923 μmol/L
Urinary Orotic AcidElevatedMildly elevated

Neonatal-onset cases often present with seizures, altered mentality, and poor prognosis without intervention .

Molecular Studies: Genetic Mutations and Functional Impact

Over 400 mutations in the OTC gene have been identified, with missense substitutions being the most common . High-throughput functional assays have quantified the impact of 1,570 variants on enzyme activity .

Functional Classification of OTC Mutations

Mutation TypeActivity (% Wild-Type)Clinical Correlation
Pathogenic< 5%Neonatal-onset hyperammonemia
Late-Onset5–20%Partial enzyme function
Benign> 20%No clinical symptoms

Polymorphisms like p.Gln270Arg can modulate enzyme activity, acting as genetic modifiers .

Research on OTC Compounds: L-2-Oxothiazolidine-4-Carboxylic Acid

In unrelated studies, L-2-Oxothiazolidine-4-Carboxylic Acid (OTC), a cysteine prodrug, has shown dual antioxidant and anti-inflammatory effects in retinal pigment epithelial (RPE) cells .

Mechanisms of Action

PathwayEffectRelevance to Disease
GPR109A ActivationSuppressed IL-6/Ccl2Anti-inflammatory response
Glutathione SynthesisIncreased cellular GSHOxidative stress mitigation

Preclinical studies in AMD models demonstrated reduced retinal lesions with OTC treatment .

Challenges and Future Directions

OTC Deficiency: Early diagnosis via newborn screening and ammonia-lowering therapies remain critical. Gene therapy and enzyme replacement are under investigation .
OTC Prodrug: Further clinical trials are needed to assess safety and efficacy in humans for retinal diseases .

Product Specs

Introduction
Ornithine transcarbamylase (OTC) is an enzyme that plays a crucial role in the urea cycle, a metabolic pathway responsible for detoxifying ammonia in the body. OTC catalyzes the conversion of ornithine and carbamoyl phosphate into citrulline. Deficiencies in OTC activity can lead to a disorder known as ornithine transcarbamylase deficiency (OTCD), characterized by elevated ammonia levels (hyperammonemia).
Description
Recombinant OTC, expressed in E. coli, is a single polypeptide chain consisting of 347 amino acids (residues 33-354) with a molecular weight of 38.9 kDa. This OTC protein is modified with a 25 amino acid His-tag at the N-terminus and is purified using proprietary chromatographic techniques.
Physical Appearance
Clear, colorless solution that has been sterilized by filtration.
Formulation
The OTC solution is provided at a concentration of 0.5 mg/ml and is formulated in a buffer containing 20 mM MES (pH 6.0), 100 mM NaCl, 2 mM DTT, and 10% glycerol.
Stability
For short-term storage (up to 4 weeks), the OTC solution can be stored at 4°C. For extended storage, it is recommended to freeze the solution at -20°C. The addition of a carrier protein such as HSA or BSA (0.1%) is advisable for long-term storage. Repeated freezing and thawing of the solution should be avoided.
Purity
The purity of the OTC protein is greater than 90%, as assessed by SDS-PAGE analysis.
Synonyms
Ornithine carbamoyltransferase mitochondrial, Ornithine transcarbamylase, OTCase, OCTD, EC 2.1.3.3.
Source
E.coli.
Amino Acid Sequence
MGSSHHHHHH SSGLVPRGSH MGSHMNKVQL KGRDLLTLKN FTGEEIKYML WLSADLKFRI KQKGEYLPLL QGKSLGMIFE KRSTRTRLST ETGFALLGGH PCFLTTQDIH LGVNESLTDT ARVLSSMADA VLARVYKQSD LDTLAKEASI PIINGLSDLY HPIQILADYL TLQEHYSSLK GLTLSWIGDG NNILHSIMMS AAKFGMHLQA ATPKGYEPDA SVTKLAEQYA KENGTKLLLT NDPLEAAHGG NVLITDTWIS MGQEEEKKKR LQAFQGYQVT MKTAKVAASD WTFLHCLPRK PEEVDDEVFY SPRSLVFPEA ENRKWTIMAV MVSLLTDYSP QLQKPKF.

Q&A

What is OTC and what is its primary function in humans?

Ornithine TransCarbamylase (OTC) is a critical enzyme in the urea cycle responsible for converting ornithine and carbamoyl phosphate to citrulline. This conversion represents an essential step in ammonia detoxification in humans, particularly in hepatocytes. The enzyme is encoded by the OTC gene located on the X chromosome, making OTC deficiency an X-linked disorder. Understanding OTC's function is fundamental to researching metabolic disorders associated with ammonia accumulation and protein metabolism dysfunction .

How do OTC mutations manifest clinically in human subjects?

OTC mutations can manifest with varying severity depending on the specific genetic alteration and its impact on enzyme activity. Clinical presentations range from neonatal-onset hyperammonemic coma with high mortality to milder late-onset forms characterized by episodic hyperammonemia triggered by catabolic stress. Researchers should note that heterozygous females can exhibit variable phenotypes due to random X-chromosome inactivation patterns. When designing clinical studies, it's essential to stratify subjects based on mutation type and residual enzyme activity rather than solely on clinical symptoms .

What are the primary models used for studying human OTC deficiency?

Human OTC deficiency is studied through several complementary models:

  • Minigene Expression Systems: Allow investigation of splicing mechanisms and assessment of mutation effects on mRNA processing

  • Cell Culture Models: Hepatoma cell lines (like HepG2) transfected with wild-type or mutant OTC constructs

  • Mouse Models: The spf^ash mouse with the corresponding c.386G>A mutation serves as an important in vivo model

  • Patient-derived Samples: Primary hepatocytes or fibroblasts from affected individuals

Each model offers distinct advantages for different research questions. For comprehensive analysis, researchers should consider using multiple models to validate findings across different experimental systems .

How do species-specific splicing mechanisms affect OTC c.386G>A mutation outcomes?

The OTC c.386G>A mutation produces remarkably different splicing patterns between humans and mice due to critical nucleotide variations in intron 4. Research has revealed that:

  • In humans: The mutation primarily causes exon skipping (32%) and usage of a proximal cryptic 5′ splice site at c.386+5 (65%), with minimal correct transcripts (3%)

  • In mice: The mutation leads predominantly to exon skipping (77%), with appreciable correct transcript formation (13%) and usage of a distal cryptic splice site at c.386+49 (7%)

This differential splicing is explained by variations at positions +10-11 in intron 4, which affect complementarity with U1snRNA. When human sequences were modified to mimic mouse sequences at these positions, the splicing pattern shifted to resemble the mouse pattern. This demonstrates how subtle intronic variations can dictate species-specific splicing outcomes .

What role does TIA1 play in regulating OTC splicing efficiency?

The TIA1 splicing factor has been identified as a key regulator in OTC splicing, particularly in the context of the c.386G>A mutation. Pull-down assays demonstrated that the mouse intronic +10-11 nucleotides confer preferential binding to TIA1. Experimental evidence shows:

  • TIA1 overexpression in mouse contexts increases correct splicing

  • Human minigenes with mouse +10-11 nucleotides show restored responsiveness to TIA1 overexpression

  • Swapping human +10-11 nucleotides into the mouse context diminishes TIA1 responsiveness

This indicates that TIA1 functions as a splicing enhancer that recognizes specific intronic motifs to promote inclusion of exon 4 in OTC transcripts. Researchers developing splice-modulating therapies should consider TIA1-binding capacity as a potential target for enhancing correct splicing in OTC deficiency .

How do engineered U1snRNAs interact with OTC mutations in different species contexts?

Engineered U1snRNAs represent a potential therapeutic approach for splicing mutations, but their efficacy varies between species due to nucleotide context differences. Research findings indicate:

MutationHuman Response to U1snRNAMouse Response to U1snRNAContributing Factors
c.386G>AMinimal rescueSignificant rescueVariations at +10-11 positions
c.386+5G>ARescuableVariableAbrogation of cryptic 5′ss
Other 5′ss mutationsVariable efficacyVariable efficacyDepends on interplay between authentic and cryptic splice sites

These findings highlight the importance of understanding species-specific splicing mechanisms before translating RNA therapeutics from animal models to humans. Researchers should carefully evaluate the interplay between the authentic and adjacent cryptic 5′ss when developing U1snRNA-based approaches .

What defines a compound as an over-the-counter (OTC) drug for human use?

For a compound to be classified as an over-the-counter drug suitable for human use, regulatory agencies require evidence meeting specific criteria:

  • High safety profile with minimal risk across diverse populations

  • Low potential for misuse or abuse compared to prescription medications

  • Therapeutic window that either doesn't cause toxicity or causes only rare minor side effects

  • Demonstrated consumer comprehension of labeling information (label comprehension)

  • Evidence that consumers can self-select the drug appropriately without physician guidance

These requirements represent the culmination of extensive preclinical and clinical testing phases. When designing studies to evaluate potential OTC drug candidates, researchers must specifically address these five criteria through methodologically sound investigations .

What is the standard development pathway for human OTC drugs?

The development pathway for human OTC drugs follows a structured process:

  • Discovery Phase: Identification of therapeutic candidates with potential benefits

  • Preclinical Evaluation: Assessment in animal models and human cell cultures to determine:

    • Molecular targets and mechanisms

    • Metabolic pathways

    • Persistence in biological systems

    • Adverse or toxic effects under various dosing schedules

  • Clinical Trials:

    • Phase I: Safety evaluation in healthy human subjects

    • Phase II: Efficacy testing in small cohorts with targeted condition

    • Phase III: Confirmation of efficacy and safety in larger populations

  • Regulatory Review: Evaluation by agencies like FDA or MHRA

  • OTC Classification: Either through initial approval or later Rx-to-OTC switch

  • Post-marketing Surveillance: Ongoing monitoring for unexpected effects

Approximately 90% of drug candidates fail during clinical trials. Researchers should design studies cognizant of the specific requirements for each development phase, with particular attention to safety margins when targeting potential OTC status .

What methodologies best detect and characterize OTC drug toxicity in human subjects?

Research into OTC drug toxicity requires a multi-faceted methodological approach:

  • Bioanalytical Techniques:

    • Liquid chromatography-mass spectrometry (LC-MS/MS) for compound quantification in biological matrices

    • Metabolomic profiling to identify toxic metabolites

    • Pharmacokinetic modeling to establish dose-concentration relationships

  • Clinical Biomarkers:

    • Liver function tests for hepatotoxicity (ALT, AST, bilirubin)

    • Kidney function markers for nephrotoxicity (creatinine, GFR, KIM-1)

    • Cardiac markers for cardiotoxicity (troponin, BNP)

  • Advanced Imaging:

    • MRI spectroscopy to detect metabolic changes in target organs

    • PET imaging with radiolabeled compounds to track distribution and accumulation

The diagnostic pathway typically combines detection of elevated blood concentrations with clinical manifestations and history of exposure. Researchers should implement toxicovigilance protocols that account for both fast-release and slow-release formulations, as these directly influence toxicity profiles and clinical presentations .

How do formulation differences impact OTC drug toxicity profiles in human subjects?

Formulation variations significantly influence toxicity profiles of OTC medications, with important implications for human research:

Formulation TypeToxicity OnsetPeak Plasma ConcentrationTreatment WindowResearch Implications
Fast-releaseRapid (30-60 min)Higher, earlier peakNarrowerRequires rapid intervention protocols
Slow-releaseDelayed (2-6 hours)Lower, delayed peakWiderMay cause delayed or biphasic toxicity
Combination productsVariableMultiple peaksComplexRequires consideration of drug interactions

When designing toxicity studies, researchers must account for these formulation differences through:

  • Extended sampling schedules (minimum 24 hours) to capture delayed toxicity

  • Multiple sampling timepoints to characterize absorption phases

  • Analytical methods capable of distinguishing parent compounds from metabolites

  • Protocols that assess both acute and delayed organ system effects

This approach enables detection of the full spectrum of toxicity manifestations and provides more reliable safety data for regulatory evaluation .

What are the mechanisms underlying species differences in OTC drug metabolism and toxicity?

Species differences in OTC drug metabolism and toxicity arise from several key mechanisms that researchers must consider when translating findings from animal models to humans:

  • Enzymatic Variations:

    • Differential expression of cytochrome P450 isoforms

    • Species-specific Phase II conjugation enzyme activity

    • Varying activity of transport proteins in liver and kidney

  • Pharmacokinetic Differences:

    • Humans typically metabolize compounds more slowly than rodents

    • Volume of distribution varies substantially between species

    • Protein binding profiles differ, affecting free drug concentrations

  • Target Organ Sensitivity:

    • Human hepatocytes may respond differently to metabolites than animal cells

    • Cardiac ion channels show species-specific sensitivity to drug effects

    • Renal transporters exhibit differential substrate specificity

Researchers should implement comparative studies using both animal models and human cell systems, with careful allometric scaling of dosages and exposure times. Additionally, humanized animal models expressing human drug-metabolizing enzymes can provide more translatable toxicity data .

How should researchers validate splice-altering therapies across species for OTC deficiency?

Validation of splice-altering therapies for OTC deficiency requires rigorous cross-species assessment through a structured methodology:

  • Sequence Analysis Phase:

    • Compare intronic and exonic sequences across species with attention to +10-11 positions in intron 4

    • Perform in silico prediction of splice site strengths using multiple algorithms

    • Identify potential splicing regulatory elements that may differ between species

  • Minigene Analysis Phase:

    • Create species-specific and chimeric minigenes containing authentic and cryptic splice sites

    • Test minigenes in both human and animal cell backgrounds

    • Analyze resulting splicing patterns using high-resolution methods like capillary electrophoresis

  • Therapeutic Evaluation Phase:

    • Test engineered U1snRNAs or other splice-modulating compounds in parallel systems

    • Assess TIA1 binding and other splicing factor interactions

    • Determine minimum effective concentrations for splicing correction

  • Translation Assessment:

    • Create human-sequence knock-in animal models to better predict human responses

    • Validate findings in patient-derived cell systems

    • Develop biomarkers for therapeutic efficacy that work across species

This comprehensive approach ensures that species-specific splicing mechanisms are fully characterized before attempting clinical translation of splice-modulating therapies .

What ethical frameworks should guide human research on OTC drug safety and toxicity?

Research on OTC drug safety requires stringent ethical frameworks extending beyond standard protocols:

  • Vulnerable Population Considerations:

    • Special protocols for pregnancy exposure studies

    • Age-appropriate methodologies for pediatric and geriatric populations

    • Inclusion of ethnic diversity to capture pharmacogenomic variations

  • Risk Assessment Paradigms:

    • Structured benefit-risk calculations appropriate for OTC context

    • Lower acceptable risk thresholds compared to prescription drugs

    • Formal evaluation of consumer understanding of risks

  • Post-marketing Surveillance Design:

    • Active rather than passive reporting systems

    • Specific monitoring for anticipated adverse events

    • Long-term registry studies for chronic use patterns

  • Label Comprehension Research:

    • Methodology for assessing consumer understanding

    • Literacy-appropriate testing

    • Evaluation of self-selection decision making

When designing human studies for OTC drug safety, researchers should incorporate these ethical frameworks from the outset rather than as post hoc considerations. This approach ensures that safety data is contextually appropriate for the unique OTC usage environment where medical supervision is absent .

Product Science Overview

Introduction

Ornithine carbamoyltransferase (OTC), also known as ornithine transcarbamylase, is a mitochondrial enzyme that plays a crucial role in the urea cycle. This enzyme is responsible for catalyzing the reaction between carbamoyl phosphate and ornithine to form citrulline and phosphate . The recombinant form of human OTC is produced using genetic engineering techniques, typically expressed in E. coli for research and therapeutic purposes .

Structure and Function

OTC is a trimeric protein, meaning it consists of three identical subunits. Each subunit contributes to the formation of the enzyme’s active sites, which are located at the cleft between the monomers . The enzyme’s primary function is to facilitate the sixth step in the biosynthesis of the amino acid arginine in prokaryotes and to play an essential role in the urea cycle in mammals .

In mammals, the urea cycle is vital for detoxifying ammonia, a byproduct of amino acid metabolism. Ammonia is converted into urea, a less toxic compound, which is then excreted from the body. This process is crucial for maintaining nitrogen balance and preventing the accumulation of toxic levels of ammonia in the blood .

Genetic and Molecular Aspects

The gene encoding OTC is located on the X chromosome in humans. This gene is highly conserved across different species, indicating its essential role in metabolism . Mutations in the OTC gene can lead to OTC deficiency, a rare X-linked genetic disorder characterized by hyperammonemia, which can cause severe neurological damage if left untreated .

Recombinant OTC Production

Recombinant human OTC is produced using recombinant DNA technology. The gene encoding human OTC is cloned into an expression vector, which is then introduced into E. coli or other suitable host cells. The host cells express the OTC protein, which is subsequently purified for use in research and therapeutic applications .

Recombinant OTC is used in various studies to understand the enzyme’s structure, function, and role in metabolic disorders. It also serves as a potential therapeutic agent for treating OTC deficiency by providing a source of functional enzyme to patients with this condition .

Clinical Significance

OTC deficiency is a serious metabolic disorder that requires prompt diagnosis and treatment. Recombinant human OTC has shown promise as a therapeutic option for managing this condition. By supplementing the deficient enzyme, recombinant OTC can help restore normal urea cycle function and reduce the risk of hyperammonemia .

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