OTOR Human, His

Otoraplin Human Recombinant, His Tag
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Description

Molecular Characterization of OTOR

Recombinant human OTOR (rhOTOR) is a 111-amino acid polypeptide chain produced in Chinese Hamster Ovary (CHO) cells. Key structural and functional features include:

PropertyDetails
Molecular Weight14–15 kDa (analyzed by reducing SDS-PAGE)
Amino Acid Sequence111 residues, non-glycosylated
Structural DomainsSRC Homology-3 (SH3)-like domain (residues 46–107)
Key ModificationsTyrosine sulfation at position 50
Expression SystemCHO cells
Biological ActivityFully biologically active, involved in periotic mesenchyme chondrogenesis

Source: GenScript

Inner Ear Development

OTOR is critical for initiating chondrogenesis in the periotic mesenchyme, a precursor to the otic capsule. This process is vital for auditory function, as structural defects in the otic capsule can lead to hearing impairments .

Homology with MIA/CD-RAP

OTOR shares high homology with Melanoma Inhibitory Activity (MIA) and Cartilage-Derived Retinoic Acid-Sensitive Protein (CD-RAP). Both MIA and CD-RAP are cartilage-specific proteins implicated in melanoma progression and chondrocyte regulation, suggesting OTOR may have overlapping roles in tissue development and disease .

Disease Associations

While direct links to human pathologies are not yet fully established, OTOR’s homology with MIA hints at potential roles in:

  • Cartilage Disorders: Dysregulation could impair inner ear or skeletal development.

  • Cancer: Analogous to MIA, OTOR might influence tumor microenvironment interactions.

Current Status of Recombinant OTOR

As of January 2025, GenScript has discontinued production of recombinant human OTOR. Prior studies utilized rhOTOR for in vitro and in vivo experiments to explore its chondrogenic and developmental roles .

Future Research Directions

Key unanswered questions include:

  • Mechanistic Pathways: How does OTOR interact with signaling molecules (e.g., retinoic acid) during chondrogenesis?

  • Therapeutic Potential: Could OTER modulation address hearing loss or cartilage-related diseases?

Product Specs

Introduction
OTOR proteins, also known as fibrocyte-derived protein (Fdp) and Melanoma inhibitory activity-like (MIAL), belong to the melanoma-inhibiting activity gene family. Otoraplin, a member of this family, is a secreted globular protein with a molecular weight of 16 kDa. It is expressed in the inner ear by periotic mesenchyme, as well as developing and mature fibrocytes. OTOR shares significant homology with MIA/cartilage-derived retinoic acid-sensitive protein (CD-RAP), a cartilage-specific protein also found in malignant melanoma cells. The mature human otoraplin comprises 111 amino acids, including a SH3 domain (amino acids 46-107) and a sulfated tyrosine residue at position 50. Otoraplin plays a crucial role in initiating periotic mesenchyme chondrogenesis. Functionally, it is secreted via the Golgi apparatus and contributes to cartilage development and maintenance. Notably, a common polymorphism in the OTOR translation start codon can disrupt translation, potentially leading to deafness.
Description
Recombinant Human OTOR, expressed in E. coli, is a non-glycosylated polypeptide chain comprising 128 amino acids (26-128 a.a.) with a molecular weight of 14.3 kDa. This protein is engineered with a 25 amino acid His-tag at the N-terminus and purified using proprietary chromatographic techniques.
Physical Appearance
A clear, sterile-filtered solution.
Formulation
The OTOR protein is supplied in a solution at a concentration of 0.25 mg/ml. The formulation buffer consists of Phosphate buffered saline (pH 7.4), 30% glycerol, and 1 mM DTT.
Stability
For short-term storage (up to 4 weeks), the product can be stored at 4°C. For extended storage, it is recommended to store the protein at -20°C. The addition of a carrier protein (0.1% HSA or BSA) is advised for long-term storage. To maintain protein integrity, avoid repeated freeze-thaw cycles.
Purity
The purity of OTOR is determined to be greater than 90% using SDS-PAGE analysis.
Synonyms
Otoraplin, Melanoma Inhibitory Activity-Like Protein, Fibrocyte-Derived Protein, FDP, MIAL1, MIAL, Melanoma inhibitory activity-like protein.
Source
Escherichia Coli.
Amino Acid Sequence
MGSSHHHHHH SSGLVPRGSH MGSHMLASKK LCADDECVYT ISLASAQEDY NAPDCRFINV KKGQQIYVYS KLVKENGAGE FWAGSVYGDG QDEMGVVGYF PRNLVKEQRV YQEATKEVPT TDIDFFCE.

Q&A

How do I design initial screening protocols for potential neuroprotective compounds?

When establishing screening protocols for neuroprotective compounds, a progressive approach using multiple model organisms offers the most efficient pathway to identifying promising candidates. Begin with simpler models before advancing to more complex systems.

A methodologically sound screening protocol includes:

  • In vitro assays to assess cellular mechanisms and toxicity profiles

  • Simple model organisms (C. elegans, Drosophila) for systemic effects

  • Rodent models to confirm effects in mammals

  • Non-human primate models for compounds showing strong potential

This approach is exemplified in recent research where Gardenin A was first tested in fruit flies before advancing to mouse models, demonstrating both cognitive and motor symptom improvements in Parkinson's disease models . Similarly, edonerpic maleate showed promise in rodent models before being tested in non-human primates with spinal cord injury .

What cellular mechanisms should be prioritized when studying compounds for neural recovery?

When investigating compounds for neural recovery, several key cellular mechanisms deserve priority attention:

  • Receptor trafficking and synaptic plasticity

  • Neural circuit reorganization

  • Inflammatory response modulation

  • Growth factor signaling pathways

Recent research demonstrates that edonerpic maleate enhances recovery after spinal cord injury by facilitating α-amino-3-hydroxy-5-methyl-4-isoxazole propionic acid (AMPA) receptor movement to motor control areas in the brain . This mechanism strengthens signal transmission between neurons and muscles, enhancing rehabilitation outcomes without requiring new axonal growth. Understanding these specific cellular mechanisms allows for more targeted research approaches and clearer interpretation of results.

How can we determine appropriate dosing regimens for neural plasticity-enhancing compounds?

Determining appropriate dosing regimens requires a systematic approach balancing efficacy and safety considerations:

  • Conduct dose-response studies in cell cultures to establish minimum effective concentration

  • Perform pharmacokinetic studies to understand absorption, distribution, metabolism, and excretion

  • Implement pilot studies with varying doses in appropriate animal models

  • Assess both therapeutic effects and potential side effects at each dose level

  • Determine optimal dosing frequency based on compound half-life

The edonerpic maleate research illustrates this approach, where researchers determined dosing that facilitated AMPA receptor trafficking to motor control brain regions without inducing toxicity . This systematic approach ensures both safety and efficacy while preparing for potential clinical translation.

How can researchers differentiate between neural plasticity effects and axonal regeneration in recovery models?

Differentiating between neural plasticity and axonal regeneration requires specialized experimental techniques that can isolate and measure each process:

  • Intracortical microstimulation to map cortical representations before and after intervention

  • Tract tracing with anterograde and retrograde tracers to visualize axonal connections

  • Time-course analyses distinguishing immediate plasticity from slower regenerative processes

  • Molecular markers specific to plasticity versus regeneration pathways

The edonerpic maleate research explicitly addressed this distinction, demonstrating that recovery occurred through "enhancing the strength and efficiency of residual pathways" rather than through axonal regeneration . Their research used intracortical microstimulation to show expanded cortical areas associated with distal upper limb muscles, confirming the plasticity-based mechanism. This precision in differentiating recovery mechanisms is essential for accurate interpretation of experimental results.

What experimental designs best capture synergistic effects between pharmacological interventions and rehabilitation?

To effectively assess synergistic effects between compounds and rehabilitation, researchers should implement the following experimental design elements:

  • Full factorial design with appropriate control groups:

    • Compound only

    • Rehabilitation only

    • Compound plus rehabilitation

    • No intervention (control)

  • Time-course measurements to capture intervention dynamics

  • Multiple outcome measures spanning functional, cellular, and molecular levels

  • Analyses specifically testing for statistical interaction effects

The edonerpic maleate study exemplifies this approach by comparing rehabilitation outcomes with and without the compound. The researchers found that "administering edonerpic maleate in conjunction with rehabilitation" produced significantly better outcomes than rehabilitation alone . This design allowed them to demonstrate true synergistic effects rather than simply additive benefits.

How should researchers address contradictory findings in neuroprotective compound studies?

When facing contradictory findings across studies of neuroprotective compounds, implement these methodological approaches:

  • Systematic review with standardized quality assessment of contradictory studies

  • Meta-analysis with moderator analyses to identify sources of heterogeneity

  • Replication studies with standardized protocols across multiple laboratories

  • Investigation of potential moderating variables:

    • Animal characteristics (strain, age, sex)

    • Injury/disease model parameters

    • Dosing and timing variables

    • Outcome measure differences

For example, if studies of flavonoids like Gardenin A produce contradictory results, researchers should systematically analyze methodological differences before concluding genuine contradictions exist . This approach helps distinguish true contradictions from apparent ones caused by methodological variation.

What control conditions are essential when testing compounds that enhance neural plasticity?

When testing neural plasticity-enhancing compounds like edonerpic maleate, several control conditions are essential:

  • Vehicle control (same administration route, timing, and handling without active compound)

  • Positive control (known effective intervention) where available

  • Time-matched control to account for spontaneous recovery

  • Sham surgery/intervention control for invasive procedures

  • Intervention timing controls to distinguish acute versus chronic effects

The edonerpic maleate research implemented appropriate controls to isolate the compound's effects from rehabilitation effects and spontaneous recovery . Without these controls, researchers cannot confidently attribute outcomes to the compound's mechanism of action rather than confounding variables.

How can researchers optimize behavioral assessment protocols for neurological recovery studies?

Optimizing behavioral assessments for neurological recovery requires:

  • Selection of tasks directly relevant to the neural systems under investigation

  • Establishment of reliable baseline performance before intervention

  • Regular standardized assessments throughout the intervention period

  • Combination of automated and observer-based measurements

  • Tasks with sufficient sensitivity to detect subtle improvements

In the edonerpic maleate research, non-human primates were trained in food retrieval tasks before spinal cord injury, establishing a clear baseline for post-injury and treatment assessment . This approach allowed researchers to quantify recovery with functionally meaningful metrics rather than relying solely on physiological markers.

What methodological approaches maximize translational potential from animal models to human clinical trials?

To maximize translational potential, researchers should:

  • Select animal models that closely mimic human pathophysiology

  • Use clinically relevant injury models and intervention timelines

  • Include heterogeneous subject populations (varied ages, both sexes)

  • Employ outcome measures with direct human clinical parallels

  • Test compounds in combination with standard clinical care approaches

  • Include long-term follow-up to assess durability of effects

The edonerpic maleate research demonstrates strong translational potential by using non-human primates (whose motor systems closely resemble humans), testing the compound alongside rehabilitation (standard clinical practice), and assessing practical motor functions relevant to human daily activities . Professor Takahashi specifically noted the translational vision: "We envision this novel drug being used in rehabilitation hospitals to enhance recovery from paralysis in patients with SCI worldwide" .

How should dose-scaling be approached when translating from animal models to human trials?

When scaling doses from animal studies to human trials, researchers should consider:

  • Allometric scaling based on body weight (mg/kg) as a starting point

  • Adjustments based on differences in metabolism and clearance rates

  • Pharmacokinetic/pharmacodynamic (PK/PD) modeling to predict human doses

  • Consideration of target engagement biomarkers that translate across species

  • Safety margin calculations based on no-observed-adverse-effect levels (NOAEL)

Although specific dose-scaling data wasn't provided for edonerpic maleate or Gardenin A in the search results, these principles represent standard methodological approaches for translating promising compounds from animal studies to human clinical trials.

What statistical approaches best capture neural recovery trajectories in longitudinal studies?

Analyzing neural recovery trajectories requires sophisticated statistical approaches:

  • Mixed-effects models that account for:

    • Fixed effects (treatment, time)

    • Random effects (individual differences)

    • Non-linear recovery patterns

  • Growth curve modeling to characterize recovery trajectories

  • Repeated measures ANOVA with appropriate post-hoc tests

  • Time-to-event analyses for recovery milestones

  • Statistical approaches that handle missing data appropriately

These approaches allow researchers to move beyond simple pre-post comparisons and capture the complex, non-linear nature of neural recovery processes, as would be necessary when analyzing the progressive recovery observed in studies of compounds like edonerpic maleate .

How can researchers integrate molecular, cellular, and behavioral data in neuroprotective compound research?

Integrating multiple levels of analysis requires:

  • Hierarchical study design examining the same subjects across levels

  • Correlational analyses between molecular markers and behavioral outcomes

  • Mediation analyses testing whether cellular changes mediate behavioral improvements

  • Path analysis or structural equation modeling for multi-level relationships

  • Systems biology approaches modeling relationships between variables across levels

Both the edonerpic maleate and Gardenin A research exemplify this integration by connecting specific molecular mechanisms (AMPA receptor trafficking and flavonoid effects ) to functional outcomes (motor recovery and reduction in Parkinson's symptoms).

What criteria should determine advancement of neural compounds from preclinical to clinical testing?

Compounds should advance from preclinical to clinical testing when they meet these criteria:

  • Demonstrated efficacy in relevant animal models, including higher-order species when possible

  • Established mechanism of action with supporting evidence

  • Acceptable safety profile with defined therapeutic window

  • Pharmacokinetic properties compatible with practical clinical use

  • Advantages over existing treatments in efficacy, safety, or administration

  • Manufacturing feasibility at clinical scale

The edonerpic maleate research demonstrates several of these criteria, showing efficacy in non-human primates, a clear mechanism involving AMPA receptor trafficking, and practical oral administration that would be feasible in clinical settings . These characteristics position it well for potential clinical translation.

How should combination therapies with neural plasticity compounds be designed and evaluated?

Designing and evaluating combination therapies requires:

  • Mechanistic rationale for the combination (distinct, complementary, or synergistic mechanisms)

  • Factorial experimental design testing individual components and combinations

  • Isobolographic analysis to identify synergistic, additive, or antagonistic effects

  • Safety evaluation of the combination beyond individual components

  • Optimization of timing and sequencing of combined interventions

The edonerpic maleate research demonstrates this approach by specifically testing the compound in combination with rehabilitation therapy, showing enhanced efficacy beyond either intervention alone . This synergistic effect highlights the importance of properly designed combination therapy studies.

Product Science Overview

Introduction

Otoraplin, also known as OTOR, is a protein encoded by the OTOR gene. It is a member of the melanoma-inhibiting activity (MIA) gene family, which includes proteins such as melanoma inhibitory activity protein 3 (MIA3). Otoraplin is a secreted cytokine that plays a significant role in various biological processes, including cartilage development and maintenance, as well as potential therapeutic applications in cancer treatment .

Gene and Protein Structure

The OTOR gene is located on chromosome 20 and encodes the Otoraplin protein. The protein is secreted via the Golgi apparatus and is involved in several cellular functions. A frequent polymorphism in the translation start codon of this gene can abolish translation and may be associated with forms of deafness .

Function and Mechanism

Otoraplin has several key functions:

  1. Cartilage Development: It is believed to play a role in the development and maintenance of cartilage throughout the human body. This includes early chondrogenesis of the otic capsule, which is essential for inner ear development and auditory function .
  2. Cancer Treatment: Otoraplin has shown potential in inhibiting melanoma by promoting “suicide gene therapy” in malignant melanoma. This means that Otoraplin encourages cancer cells to undergo apoptosis (programmed cell death), which can be an effective treatment for melanoma .
  3. Cell Migration: Otoraplin acts as a regulator of cell migration. At lower concentrations, it stimulates cell migration, while at higher concentrations, it inhibits cell migration .
Recombinant Otoraplin (His Tag)

Recombinant Otoraplin with a His tag is a form of the protein that has been genetically engineered to include a polyhistidine tag. This tag facilitates the purification and detection of the protein in laboratory settings. The His tag allows for easy binding to nickel or cobalt ions, which can be used to isolate the protein from a mixture of other proteins and cellular components .

Clinical and Research Applications

Otoraplin’s potential applications are still being explored, but it has shown promise in several areas:

  • Melanoma Treatment: As mentioned, Otoraplin’s ability to induce apoptosis in melanoma cells makes it a potential candidate for cancer therapy .
  • Cartilage Repair: Its role in cartilage development suggests potential therapeutic benefits for conditions involving cartilage damage or degeneration .
  • Hearing Disorders: Given its involvement in inner ear development, mutations or disruptions in the OTOR gene may be linked to hearing disorders, making it a target for further research in this area .

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