The P2A12-1-C8 antibody is a monoclonal immunoglobulin of the IgG isotype, produced via hybridoma technology from Lou/M rats immunized with fluorescein-conjugated keyhole limpet hemocyanin (FITC-KLH) . Its binding affinity for fluorescein is exceptionally high, with a dissociation constant (Kd) of 2.0 × 10¹⁰ M⁻¹, making it suitable for sensitive immunochemical assays .
| Property | Value |
|---|---|
| Isotype | IgG |
| Affinity (Kd) | 2.0 × 10¹⁰ M⁻¹ |
| Cross-reactivity | HPF, phenol red (not phenolphthalein) |
| Epitope | Fluorescein aromatic rings |
The antibody exhibits selective reactivity with ligands sharing structural features with fluorescein. Molecular modeling revealed that phenol red’s aromatic rings align closely with fluorescein’s energetically favorable conformation, enabling cross-binding . Conversely, phenolphthalein, despite structural similarity, lacks this alignment, resulting in no detectable reactivity .
| Ligand | Reactivity | Reason |
|---|---|---|
| HPF | High | Shared aromatic ring dynamics |
| Phenol red | Moderate | Structural isomer accommodation |
| Phenolphthalein | None | Misaligned aromatic rings |
The P2A12-1-C8 antibody has been utilized in:
Immunofluorescence: Detecting fluorescein-tagged proteins in cell imaging .
ELISA: Quantifying fluorescein-conjugated antigens with high precision .
Dynamic Ligand Studies: Investigating how antibodies stabilize transient ligand isomers .
Its specificity makes it a valuable tool for distinguishing between fluorescein and its analogues in complex biological samples .
The antibody’s ability to recognize dynamic ligand conformations challenges traditional views of antibody-ligand interactions, suggesting that epitope recognition can depend on ligand flexibility rather than rigid structural complementarity . This has implications for antibody engineering and diagnostics targeting flexible biomolecules .
The P2Y12 receptor belongs to the G-protein coupled receptor superfamily and functions primarily as a receptor for adenosine diphosphate (ADP) and adenosine triphosphate (ATP). It couples to G-proteins that inhibit the adenylyl cyclase second messenger system but is not activated by uridine diphosphate (UDP) or uridine triphosphate (UTP) .
The receptor plays essential roles in:
Platelet activation and aggregation when co-expressed with P2Y1 receptor
Normal blood coagulation processes
Microglial cell function in the central nervous system
Signal transduction pathways involving intracellular calcium mobilization
P2Y12 is a well-established therapeutic target for thromboembolism treatment and other clotting disorders, as its inhibition prevents excessive platelet aggregation .
P2Y12 receptor expression has been confirmed in multiple tissues and cell types using various detection methods:
Platelets: Most abundant expression, critical for aggregation responses
Brain: Predominantly in microglial cells, making it a useful microglial marker
Peripheral tissues: Detected in lung, appendix, pituitary and adrenal glands
Cell lines: Found in BV-2 microglia cells and rat basophilic leukemia (RBL) cells
When designing experiments targeting P2Y12, researchers should consider these expression patterns to select appropriate positive and negative control tissues .
Several antibody formats have been developed for detecting P2Y12 in various experimental applications:
| Antibody Type | Applications | Species Reactivity | Clone Examples |
|---|---|---|---|
| Anti-P2Y12 Receptor (extracellular) | Western blot, Live cell imaging, Flow cytometry | Human, Mouse, Rat | APR-020 |
| Recombinant Monoclonal | IHC-P, mIHC, IHC-Fr | Human, Mouse, Rat | EPR26298-93 |
| APC-conjugated | Flow cytometry | Human | S16001E |
When selecting an antibody, researchers should consider the specific epitope recognition (e.g., extracellular domains), species cross-reactivity, and validation in the intended application .
For successful cell surface detection of P2Y12 receptors on intact, living cells:
Maintain cells in appropriate growth medium at proper density (typically 70-80% confluence)
Harvest cells using a gentle detachment method that preserves surface epitopes (avoid harsh trypsinization)
Resuspend cells in cold staining buffer (PBS with 1-2% serum or BSA)
Incubate with primary anti-P2Y12 antibody at manufacturer's recommended dilution (typically 1:100-1:200) for 30-45 minutes at 4°C
Wash cells 2-3 times with cold staining buffer
Apply appropriate labeled secondary antibody (e.g., goat anti-rabbit-AlexaFluor-594)
Incubate for 30 minutes at 4°C in darkness
Wash thoroughly and analyze promptly
For flow cytometry applications specifically, use 5 μL of conjugated antibody per million cells in 100 μL staining volume or 5 μL per 100 μL of whole blood .
Proper experimental controls are essential for rigorous P2Y12 antibody research:
Positive tissue controls: Use rat brain membrane or human cerebrum tissue sections with known P2Y12 expression
Negative controls: Include secondary antibody-only controls to assess background
Blocking peptide controls: Pre-incubate antibody with P2Y12 receptor blocking peptide to confirm specificity
Isotype controls: Use matched isotype antibodies (e.g., Mouse IgG2a, κ for some clones) to identify non-specific binding
Knockout/knockdown controls: When available, use P2Y12-deficient samples to validate signal specificity
These controls help distinguish specific P2Y12 signal from background or non-specific binding, particularly important when examining tissues with low receptor expression levels .
Optimizing P2Y12 antibody protocols for microglia research requires careful consideration of several factors:
Tissue preparation: For brain tissue immunohistochemistry, heat-mediated antigen retrieval with Tris-EDTA buffer (pH 9.0) for 20 minutes typically provides optimal epitope exposure
Antibody selection: Choose antibodies validated specifically in microglial cells (e.g., BV-2 cell line)
Dilution optimization: For paraffin-embedded human cerebrum tissue, dilutions of 1:40000 have been validated for some clones
Co-staining approach:
Combine P2Y12 detection with additional microglial markers (Iba1, CD68)
Use multiplexed immunohistochemistry to simultaneously assess activation state markers
Analysis methods: Employ quantitative image analysis to measure both receptor expression levels and morphological changes in microglia
P2Y12 expression typically decreases during microglial activation, making it a valuable marker for monitoring inflammatory responses in the CNS .
When investigating platelet function with P2Y12 antibodies, researchers should implement these methodological considerations:
Sample preparation:
Collect blood in anticoagulants that minimally affect platelet function (sodium citrate preferred)
Prepare platelet-rich plasma (PRP) promptly after collection
Consider testing both resting and activated platelets (using ADP stimulation)
Functional assays:
Combine antibody detection with aggregometry to correlate receptor expression with function
When using P2Y12 antagonists like R-138727, assess dose-dependent inhibition of ADP-induced aggregation
Consider dual-pathway inhibition studies combining P2Y12 and GPIIb-IIIa antagonists
Flow cytometric assessment:
Use forward/side scatter gating to identify platelet population
Consider dual staining with platelet marker CD41/CD61 for definitive identification
Analyze both receptor expression level (MFI) and percentage of positive platelets
Data interpretation:
Account for inter-individual variability in receptor expression
Correlate with platelet activation markers (P-selectin, activated GPIIb-IIIa)
Analyze procoagulant activity parameters alongside receptor expression
These approaches enable comprehensive analysis of P2Y12 receptor in platelet function studies, particularly important when evaluating antiplatelet therapies .
The interaction between P2Y12 antagonists and antibody binding presents important experimental considerations:
Epitope accessibility:
Small molecule antagonists (thienopyridines, direct P2Y12 inhibitors) may alter receptor conformation
Extracellular epitope-targeting antibodies may show reduced binding when antagonists occupy binding sites
Intracellular domain antibodies generally remain unaffected by antagonist binding
Receptor internalization effects:
Some antagonists promote receptor internalization, reducing surface detection
Time-course experiments can distinguish between occupancy and downregulation
Consider fixed versus live cell detection protocols based on research question
Experimental approach recommendations:
Include antagonist-free controls when studying antibody binding
Consider measuring total receptor (permeabilized cells) versus surface receptor
Use concentration-response curves to detect subtle antagonist effects on antibody binding
For in vivo studies, collect samples at multiple timepoints relative to antagonist administration
Understanding these interactions is crucial for accurate interpretation of experimental results, particularly in pharmacological studies evaluating P2Y12 inhibition in platelet function .
Enhancing P2Y12 antibody specificity in complex tissues requires systematic optimization:
Antibody selection strategies:
Choose antibodies developed using computation-guided design approaches targeting unique epitopes
Select antibodies validated against multiple similar ligands to confirm specificity
Consider recombinant monoclonal antibodies which typically offer higher specificity than polyclonals
Protocol optimization:
Implement stringent blocking steps using species-appropriate serum/BSA combinations
Optimize antibody concentration through careful titration experiments
Adjust incubation parameters (time, temperature, buffer composition)
Consider antigen retrieval modifications for fixed tissues
Validation approaches:
Perform pre-adsorption experiments with blocking peptides specific to P2Y12
Include tissues with knockout/knockdown P2Y12 expression as negative controls
Confirm findings with alternative antibody clones targeting different epitopes
Correlate protein detection with mRNA expression data
Advanced analytical methods:
Employ spectral imaging to distinguish specific signal from autofluorescence
Use computational image analysis to apply consistent signal thresholds
Consider single-cell analysis techniques to resolve heterogeneous expression
These approaches collectively enhance confidence in P2Y12 detection specificity, particularly important in tissues with complex cellular composition such as brain tissue .
Understanding potential cross-reactivity mechanisms is crucial for accurate P2Y12 detection:
Structural similarity challenges:
P2Y12 shares significant sequence homology with other P2Y family members, particularly P2Y13 and P2Y14
Transmembrane domains are especially conserved across purinergic receptors
Extracellular loops, while more variable, may contain similar structural motifs
Epitope-specific considerations:
Antibodies targeting the third extracellular loop (e.g., residues 270-282 in human P2Y12) show enhanced specificity
Antibodies against intracellular domains may cross-react with shared G-protein coupling motifs
Post-translational modifications can create or mask cross-reactive epitopes
Experimental verification approaches:
Perform parallel staining with known P2Y1, P2Y13, and P2Y14 antibodies
Use heterologous expression systems to test antibodies against individual receptor subtypes
Consider computational epitope prediction to identify potential cross-reactive regions
Employ binding mode analysis to distinguish specific from non-specific interactions
Emerging selection technologies:
Phage display selection against multiple ligands can identify antibodies with customized specificity profiles
High-throughput sequencing analysis helps identify binding modes associated with specific targets
Computational design approaches can optimize antibody sequences for improved discrimination
These considerations help researchers select and validate antibodies with minimal cross-reactivity to other purinergic receptors, improving experimental reliability .
When confronting weak P2Y12 signal intensity, implement this systematic troubleshooting approach:
Sample preparation optimization:
Ensure proper tissue fixation (10% neutral buffered formalin for 24-48 hours typically optimal)
Optimize antigen retrieval method (Tris-EDTA buffer, pH 9.0, for 20 minutes recommended)
Consider section thickness (5-7μm typically provides optimal balance of signal and resolution)
Antibody protocol enhancement:
Increase antibody concentration incrementally (test dilution series)
Extend primary antibody incubation time (overnight at 4°C may improve signal)
Try different detection systems (polymer-based versus avidin-biotin complex)
Employ signal amplification methods (tyramide signal amplification)
Signal-to-noise optimization:
Implement more aggressive blocking of non-specific binding sites
Reduce background through additional washing steps
Minimize autofluorescence through appropriate quenching steps
Consider chromogenic versus fluorescent detection based on tissue type
Instrumentation considerations:
Optimize microscope settings (exposure time, gain, offset)
Use appropriate filter sets for fluorescent detection
Consider spectral imaging to separate specific signal from autofluorescence
The optimal detection approach varies by tissue type and application context but should be systematically optimized and standardized for reliable results .
Species validation of P2Y12 antibodies requires attention to several critical factors:
Sequence homology analysis:
Human P2Y12 shares approximately 89% amino acid identity with mouse and 86% with rat
Epitope-specific sequence alignment should be performed before cross-species application
Focus on conservation in the specific region recognized by the antibody (e.g., residues 270-282 for extracellular antibodies)
Validation approaches:
Perform side-by-side comparisons using identical protocols across species
Include positive control tissues for each species (brain tissue and platelets)
Compare staining patterns to published reference data for each species
Verify with orthogonal detection methods (mRNA expression, functional assays)
Protocol adjustments:
Optimize antibody concentration independently for each species
Modify blocking solutions based on species-specific requirements
Adjust antigen retrieval conditions as needed for different tissue fixation methods
Select appropriate secondary antibodies specific to each primary antibody host species
Data interpretation considerations:
Account for species differences in cellular distribution and expression levels
Consider developmental and regional expression variations across species
Document subtle differences in subcellular localization patterns
These methodical approaches ensure reliable cross-species application of P2Y12 antibodies, particularly important for translational research bridging animal models and human studies .
Quantitative analysis of P2Y12 expression requires rigorous methodological approaches:
For Immunohistochemistry/Immunofluorescence:
Image acquisition standardization:
Use consistent exposure settings across all experimental groups
Include calibration standards in each imaging session
Capture multiple representative fields per sample (minimum 5-10)
Implement blind coding of samples to prevent bias
Analysis approaches:
Measure mean fluorescence intensity within defined cellular regions
Quantify percentage of P2Y12-positive cells within a population
Assess receptor distribution patterns (membrane versus cytoplasmic)
Apply threshold-based segmentation consistently across samples
Software tools:
ImageJ/FIJI with appropriate plugins for batch processing
CellProfiler for automated cellular identification and quantification
HALO or QuPath for whole-slide tissue analysis
For Flow Cytometry:
Assay standardization:
Use fluorescence calibration beads to standardize intensity measurements
Implement consistent gating strategies based on forward/side scatter and lineage markers
Apply the recommended antibody concentration (5 μL per million cells)
Analysis parameters:
Mean/median fluorescence intensity (MFI) for expression level quantification
Percentage of positive cells using clearly defined positive thresholds
Population distribution analysis for heterogeneous samples
Data presentation:
Report both percentage positive and MFI values
Present normalized data when comparing across experiments
Include appropriate statistical analysis for group comparisons
These approaches enable robust quantitative assessment of P2Y12 expression across experimental conditions and sample types .
Incorporating P2Y12 antibodies into multiplex immunostaining requires strategic planning:
Antibody panel design considerations:
Select antibodies from different host species to avoid cross-reactivity
Choose fluorophores with minimal spectral overlap
Consider signal intensity balancing (adjust antibody concentrations accordingly)
Plan marker combinations that answer specific biological questions
Validated multiplex protocols:
Sequential staining approach: Apply, detect, and block/strip each primary antibody sequentially
Tyramide signal amplification: Enables use of multiple antibodies from same species
Spectral imaging: Permits separation of overlapping fluorophores through linear unmixing
P2Y12-specific considerations:
Pair with cell-type specific markers (CD45, Iba1 for microglia; CD41 for platelets)
Include functional state markers (activation, maturation, polarization)
Consider subcellular colocalization studies with signaling pathway components
Quality control measures:
Include single-stain controls for spectral unmixing
Perform fluorescence minus one (FMO) controls
Validate staining pattern consistency compared to single-marker staining
These approaches enable sophisticated analysis of P2Y12 in complex cellular contexts while maintaining detection specificity and sensitivity .
Emerging trends in P2Y12 antibody technology present exciting research opportunities:
Next-generation antibody engineering:
Computational design of antibodies with customized specificity profiles
Development of conformational state-specific antibodies (active vs. inactive receptor)
Creation of bispecific antibodies targeting P2Y12 and complementary markers
Engineered antibodies with reduced immunogenicity for in vivo applications
Novel detection technologies:
Super-resolution microscopy applications for nanoscale receptor distribution
Live-cell imaging with minimally disruptive antibody fragments
Mass cytometry (CyTOF) incorporation for high-dimensional analysis
Proximity ligation assays to study receptor-protein interactions
Translational research applications:
Correlation of P2Y12 expression with clinical outcomes in cardiovascular disorders
Development of imaging agents for microglial visualization in neurological conditions
Monitoring of P2Y12 as a biomarker for antiplatelet therapy response
Investigation of P2Y12 in non-traditional cell types and pathologies
Integration with -omics approaches:
Correlation of protein expression with transcriptomic and proteomic datasets
Single-cell analysis combining antibody detection with RNA sequencing
Systems biology approaches to understand P2Y12 regulatory networks
These directions represent promising frontiers in P2Y12 research, potentially yielding new insights into receptor biology and therapeutic applications .