PCO2 Antibody

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Product Specs

Buffer
Preservative: 0.03% Proclin 300; Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
14-16 weeks (Made-to-order)
Synonyms
PCO2 antibody; At5g39890 antibody; MYH19.8 antibody; Plant cysteine oxidase 2 antibody; EC 1.13.11.20 antibody
Target Names
PCO2
Uniprot No.

Target Background

Function
This antibody targets PCO2, an enzyme that catalyzes the oxidation of N-terminal cysteine residues (N-Cys). This oxidation prepares the protein for degradation via the N-end rule pathway, involving the proteasomal enzymes ATE1, ATE2, and PRT6. Specifically, PCO2 controls the preparation of group VII ethylene response factor (ERF-VII) proteins for degradation by the 26S proteasome N-end rule pathway. It functions as an oxygen sensor, regulating the stability of ERF-VII proteins. These proteins are stabilized under hypoxic conditions (e.g., flooding), where they modulate transcriptional responses to these stresses. Importantly, PCO2's activity is limited to N-terminal cysteine residues; it does not act on cysteines located internally or at the C-terminus of a peptide. PCO2 exhibits functional redundancy with PCO1 in repressing the anaerobic response.
Database Links

KEGG: ath:AT5G39890

STRING: 3702.AT5G39890.1

UniGene: At.30320

Protein Families
Cysteine dioxygenase family
Subcellular Location
Nucleus. Cytoplasm.

Q&A

Basic: How does elevated pCO₂ impact hybridoma/CHO cell growth and antibody production?

Methodological Approach:

  • Use controlled bioreactor systems with real-time monitoring of pCO₂, osmolality, and pH. Decouple osmolality from pCO₂ effects by adjusting bicarbonate/NaCl independently .

  • Key Findings:

    • Growth inhibition correlates with pCO₂ levels: 45–63% reduction at 195–250 mmHg .

    • Antibody titre may increase at moderate pCO₂ (20–100 mmHg) but decline sharply at >140 mmHg .

    • Specific productivity (qAb) remains stable across pCO₂ ranges (20–250 mmHg) .

Experimental Design Tip:

"Include osmolality-compensated and non-compensated arms to isolate pCO₂ effects" .

Basic: What parameters should be prioritized when optimizing pCO₂ for mAb processes?

Critical Variables:

  • Osmolality compensation (prevents confounding effects) .

  • Glucose concentration (modulates pCO₂ toxicity; low glucose exacerbates growth inhibition at high pCO₂) .

  • Culture system (batch vs. continuous: pCO₂ tolerance differs due to nutrient dynamics) .

Data Contradiction Alert:

  • Elevated pCO₂ (140 mmHg) reduced viable cell density by 25–40% in continuous culture but lowered death rates due to improved nutrient availability .

Advanced: How does pCO₂ interact with glycosylation and charge variants in mAbs?

Analytical Workflow:

  • Isoelectric focusing (IEF) to assess charge heterogeneity .

  • HILIC-UPLC for glycan profiling (e.g., galactose, mannose content) .

  • β-galactosidase activity assays to link organellar pH shifts to glycosylation changes .

Key Interactions:

ConditionGalactose ContentIsoelectric Point (pI)
High osmolality (435 mOsm)↓ 15–20%↑ 0.32–0.41 units
High pCO₂ (250 mmHg)↑ 5–10%↓ 0.16 units (serum)

Mechanistic Insight:

"Hyperosmotic stress disrupts Golgi pH, altering galactosyltransferase activity" .

Advanced: Why do studies report conflicting effects of pCO₂ on mAb titre?

Resolution Strategies:

  • Factor Interaction Analysis: Use multivariate DOE (e.g., fractional factorial designs) to assess pCO₂ × osmolality × glucose interactions .

  • Case Study:

    • At 140 mmHg pCO₂, titre increased by 12% with osmolality control (320 mOsm) but decreased by 8% without compensation .

    • Glucose limitation reverses pCO₂-driven growth inhibition at ≤140 mmHg but worsens it at 220 mmHg .

Recommendation:

"Benchmark studies using the N-mAb framework for integrated parameter control" .

Advanced: How to mitigate pCO₂-induced metabolic shifts in CHO cells?

Intervention Toolkit:

  • Metabolic Flux Analysis (MFA): Identifies NADH/ATP turnover changes under high pCO₂ .

  • Feed Adjustments: Reduce lactate accumulation via glutamine-free feeds or serine supplementation .

  • Process Analytics:

    • Monitor lactate/glucose yield ratios (threshold: >1.5 indicates metabolic stress) .

    • Track alanine production as a proxy for pyruvate dehydrogenase activity .

Basic: What are best practices for scaling pCO₂-controlled processes?

Scale-Up Protocol:

  • Sparging Optimization: Use micro-bubbles for CO₂ stripping (kLa >15 h⁻¹) .

  • In-line Sensors: Implement Raman spectroscopy for real-time pCO₂/osmolality tracking .

  • Risk Assessment:

    • High pCO₂ (>100 mmHg) increases basic charge variants by 8–12% – include cation-exchange chromatography in purification trains .

Advanced: Can pCO₂ modulate antibody-dependent cellular cytotoxicity (ADCC)?

Research Frontier:

  • Link to Glycosylation: High pCO₂ (100 mmHg) reduces afucosylation by 1.3-fold, potentially lowering ADCC .

  • Experimental Design: Pair glycoengineered cell lines with pCO₂ stress tests.

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