PKP1 Antibody

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Description

Definition and Functional Overview of PKP1 Antibodies

PKP1 antibodies are immunological reagents designed to specifically bind plakophilin 1, a 747-amino acid protein (82.9–83 kDa) localized to the nucleus and cell junctions . These antibodies enable the detection of PKP1 in diverse experimental contexts, including Western blot (WB), immunohistochemistry (IHC), immunofluorescence (IF), and flow cytometry (FCM) .

Key Features of PKP1

  • Structure: Contains armadillo-repeat domains that mediate interactions with desmosomal cadherins and cytoskeletal proteins .

  • Function:

    • Stabilizes desmosomes and intermediate filaments .

    • Regulates gene expression through cytoplasmic mRNA ribonucleoprotein (RNP) complexes .

    • Associated with epidermal morphogenesis and skin barrier integrity .

  • Disease Links: Mutations in PKP1 cause ectodermal dysplasia-skin fragility syndrome (EDSFS), characterized by fragile skin and desmosomal defects .

Western Blotting

PKP1 antibodies are widely used to analyze protein expression levels in cell lysates or tissue homogenates. For example:

  • HaCaT cells and mouse/rat skin tissues show strong PKP1 signals at 70–75 kDa in WB .

  • In prostate cancer studies, PKP1 deficiency correlates with increased cytokine mRNA stability (e.g., CXCL1, IL6, IL8) .

Immunohistochemistry

  • Human skin cancer tissues exhibit cytoplasmic PKP1 staining, often requiring antigen retrieval (TE or citrate buffer) .

  • Ectodermal dysplasia-skin fragility syndrome (EDSFS): PKP1 is absent or reduced in epidermal layers, with aberrant desmoplakin and keratin distributions .

Immunofluorescence

  • PC-3 cells and prostatic adenocarcinoma tissues show punctate PKP1 localization at cell junctions or cytoplasmic RNP complexes .

Flow Cytometry

Used to profile PKP1 expression in immune cells or epithelial populations, though less commonly reported compared to WB/IHC .

Ectodermal Dysplasia-Skin Fragility Syndrome (EDSFS)

  • Mechanism: Loss-of-function PKP1 mutations lead to defective desmosomes and intermediate filament detachment .

  • Diagnostic Use: PKP1 antibodies confirm protein absence in EDSFS skin biopsies .

Prostate Cancer

  • PKP1 Deficiency: Correlates with tumor-associated immune cell infiltration (e.g., T-cells, macrophages) and upregulated pro-inflammatory cytokines .

  • Mechanism: PKP1 stabilizes cytokine mRNAs (e.g., IL8, CXCL1), and its loss prolongs mRNA half-life, driving immune recruitment .

Skin Carcinogenesis

  • Pkp1 Knockout Models: Exhibit hyperplastic epidermis, defective tight junctions (ZO-1), and aggressive squamous cell carcinoma (SCC) progression .

  • RIPK4/PKP1 Axis: Phosphorylation of PKP1 by RIPK4 regulates skin differentiation; dysregulation enhances carcinogenesis .

Nasopharyngeal Carcinoma (NPC)

  • PKP1 Expression: Predominantly epithelial, with weak staining in NPC tissues. Correlates inversely with B-cell and CD4+ T-cell infiltration .

Autoimmune Diseases

  • Pemphigus Vulgaris (PV): PKP1 overexpression in keratinocytes protects desmosomes from PV IgG-induced disruption, suggesting therapeutic potential .

Table 2: Key Research Studies Involving PKP1 Antibodies

Disease/ModelFindingsAntibody UsedCitations
EDSFSAbsent PKP1 in desmosomes; defective keratin filament organizationPolyclonal (Proteintech)
Prostate AdenocarcinomaPKP1 deficiency ↑ immune cell infiltration; ↑ cytokine mRNA stabilityPolyclonal (Proteintech)
Skin SCCPkp1 KO mice show hyperplastic epidermis and aggressive tumorsMonoclonal (OriGene)
NPCPKP1 expression ↓ in epithelial cells; correlates with immune cell infiltrationPolyclonal (Proteintech)
Pemphigus VulgarisPKP1 overexpression protects desmosomes from PV IgG-induced disruptionMonoclonal (Invitrogen)

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
PKP1 antibody; PK1 antibody; At3g22960 antibody; F5N5.15 antibody; Plastidial pyruvate kinase 1 antibody; chloroplastic antibody; PK1 antibody; PKp1 antibody; EC 2.7.1.40 antibody; Pyruvate kinase II antibody; Pyruvate kinase isozyme A antibody; PKP-ALPHA antibody
Target Names
PKP1
Uniprot No.

Target Background

Function
PKP1 Antibody is essential for plastidial pyruvate kinase activity. It plays a crucial role in seed oil accumulation, embryo development, and the mobilization of seed storage compounds during germination.
Gene References Into Functions
  1. Studies have shown significant expression of PKP1 in maturing seeds. These findings underscore the importance of plastidial pyruvate kinases for fatty acid synthesis and embryo development. PMID: 17892448
Database Links

KEGG: ath:AT3G22960

STRING: 3702.AT3G22960.1

UniGene: At.5909

Protein Families
Pyruvate kinase family
Subcellular Location
Plastid, chloroplast stroma.
Tissue Specificity
Mostly expressed in seeds, and, to a lower extent, in roots, leaves (veins and trichomes), stems, inflorescences, siliques, pollen (grains and tubes) and flowers (sepals and petals).

Q&A

Basic Research Questions

How to validate PKP1 antibody specificity in desmosome-related studies?

  • Perform triple validation using:

    • Western blot with PKP1 knockdown/rescue models (≥80% knockdown efficiency required)

    • Immunofluorescence co-localization with desmoplakin in epithelial cells

    • RNA-seq correlation (PKP1 mRNA vs protein levels) across cell lines (R² >0.7 expected)

  • Example: In prostate cancer models, PKP1-deficient cells show 3.2× increased IL8 mRNA stability, reversed by PKP1 re-expression .

What experimental controls are critical for PKP1 immunohistochemistry (IHC)?

Control TypePurposeAcceptable Outcome
Isotype controlNon-specific bindingNo nuclear/cytoplasmic staining
Knockout tissueAntibody specificityAbsent signal in PKP1-/- samples
MultiplexingCo-localization validation≤15% signal overlap with E-cadherin

Advanced Mechanistic Questions

How to resolve contradictory reports of PKP1 as both tumor suppressor (prostate) and oncogene (lung)?

  • Context-dependent analysis framework:

    • Assess desmosome integrity via TEM in target tissue

    • Quantify PKP1 isoforms (nuclear vs cytoplasmic) using subcellular fractionation

    • Perform RNA RIP-seq to identify PKP1-bound targets (e.g., MYC 5'UTR in lung vs CXCL1 in prostate)

  • Key finding: Cytoplasmic PKP1 stabilizes pro-inflammatory mRNAs (half-life increase from 2.1h to 6.8h in PKP1-/- prostate cells) , while nuclear PKP1 enhances MYC translation (2.4× increase in SqCLC) .

What multi-omics approaches elucidate PKP1's dual structural/regulatory roles?

  • Integrated workflow:

    • Proteomics: Co-IP/MS to identify PKP1 interactomes (e.g., FXR1 in mRNA complexes )

    • Transcriptomics: CLIP-seq for PKP1-RNA binding sites (87% AU-rich elements observed )

    • Functional validation: CRISPRi/a + live-cell imaging of desmosome dynamics

Technical Optimization Questions

How to optimize PKP1 antibody dilution across applications?

ApplicationRecommended DilutionValidation Metric
Western Blot1:500-1:2000Clear 82.9 kDa band ±5% variance
IHC-FFPE1:100-1:400H-score ≥200 in basal epithelial layers
Flow Cytometry1:50-1:200≥2-log shift vs isotype control

What models best recapitulate PKP1's pathophysiological roles?

  • Prioritize:

    • 3D organoids with inducible PKP1 knockdown (≥14-day culture for desmosome remodeling)

    • Xenografts with stromal PKP1 knockout (50% increase in T-cell infiltration observed )

    • Patient-derived PKP1 mutation models (e.g., Ectodermal dysplasia-associated variants )

Data Interpretation Challenges

How to distinguish PKP1's structural vs signaling functions?

  • Experimental paradigm:

    • Express PKP1 mutants (ΔARM domains for adhesion vs ΔRNA-binding regions)

    • Measure:

      • Desmosome density (structural role)

      • Cytokine secretion (signaling role)

  • Critical data: PKP1 knockdown increases THP1 migration by 220% via IL8/CXCL1 upregulation .

What bioinformatics tools analyze PKP1-associated mRNA networks?

  • Recommended pipeline:

    • STRING-DB for interaction networks (confidence >0.7)

    • DAVID for pathway enrichment (FDR <0.05)

    • Cytoscape visualization of PKP1-RNA clusters (e.g., 38% immune-related targets in prostate cancer )

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