PLP3 Antibody

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Description

Definition and Biological Relevance

PLP3 antibodies target phospholipid phosphatase 3 (PLPP3), also known as PPAP2B or LPP3, a 35.1 kDa protein localized to cell membranes. PLPP3 regulates lipid phosphate metabolism, including hydrolysis of phosphatidic acid and lysophosphatidic acid, and is essential for:

  • Bergmann glial cell differentiation

  • Blood vessel development

  • Neuronal signaling pathways .

The protein is ubiquitously expressed across tissues and conserved in mammals, reptiles, and zebrafish .

Applications in Research

PLP3 antibodies are utilized in multiple experimental contexts:

ApplicationDetailsExample Antibodies
Western BlotDetects PLPP3 in lysates from brain, liver, and cancer tissuesSigma-Aldrich HPA072751
ImmunofluorescenceVisualizes PLPP3 localization in cell membranes and organellesBio-Techne NBP3-07603
ImmunohistochemistryIdentifies PLPP3 in formalin-fixed paraffin-embedded (FFPE) tissuesF4.4C2, F3.9E9, 2D2
Flow CytometryQuantifies PLPP3 surface expression in live cellsNovus Biologicals PLP1/4259

Association with Multiple Sclerosis

  • Anti-PLP antibodies targeting residues 181–230 correlate with MS severity in HLA-compatible patients. Elevated levels are linked to increased demyelination and disability progression .

  • Antibodies like P7.6A5 (epitope 178–191) and F4.8A5 (epitope 200–219) bind natively folded PLP on oligodendrocytes, suggesting a direct role in autoimmune attacks .

Challenges in Antibody Validation

  • Specificity Issues: Non-recombinant PLP3 antibodies often lack adequate validation, leading to false positives. Third-party testing is recommended to confirm target recognition .

  • Batch Variability: Polyclonal antibodies exhibit lot-to-lot inconsistency, unlike recombinant alternatives .

Future Directions

  • Therapeutic Potential: Antibodies like O10 could serve as biomarkers for monitoring MS progression or designing antigen-specific therapies .

  • Improved Validation: Centralized repositories for knockout controls and third-party testing are proposed to enhance antibody reliability .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M Phosphate Buffered Saline (PBS), pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
PLP3 antibody; At4g37050 antibody; AP22.16 antibody; C7A10.310 antibody; Patatin-like protein 3 antibody; AtPLP3 antibody; EC 3.1.1.- antibody; Patatin-related phospholipase A IIbeta antibody; pPLAIIb antibody; Phospholipase A IVC antibody; AtPLAIVC antibody
Target Names
PLP3
Uniprot No.

Target Background

Function
This antibody exhibits non-specific lipolytic acyl hydrolase (LAH) activity. It catalyzes the hydrolysis of neutral lipids such as monogalactosyldiacylglycerol (MGDG), digalactosyldiacylglycerol (DGDG), and phosphatidylglycerol (PG). It also hydrolyzes the polar lipids phosphatidylcholine (PC) and phosphatidylinositol (PI), but not the storage lipid triacylglycerol (TAG), to a lesser extent. This antibody may play a role in root development.
Database Links

KEGG: ath:AT4G37050

STRING: 3702.AT4G37050.1

UniGene: At.4646

Protein Families
Patatin family
Subcellular Location
Cytoplasm.
Tissue Specificity
Expressed specifically in the stigma, ovary and funiculus of the ovary.

Q&A

PLP3 Antibody: Frequently Asked Questions for Academic Researchers

Advanced Research Questions

How can researchers resolve contradictory data on PLP3 localization across studies?

  • Strategies:

    • Contextual analysis: Assess differences in cell lines, fixation methods, or antibody batches (e.g., HEK293 vs. CHO expression systems may yield varying glycosylation patterns) .

    • Orthogonal validation: Combine IF with subcellular fractionation followed by Western blot (e.g., nuclear/cytoplasmic separation) .

    • Epitope mapping: Use truncated PLP3 constructs to identify antibody-binding regions and assess cross-reactivity .

What experimental design considerations are critical for PLP3 antibody-based therapeutic studies?

  • Key parameters:

    • Affinity vs. specificity: Prioritize antibodies with ≤1 nM KD (surface plasmon resonance) and >100-fold selectivity over homologs .

    • In vivo models: Use PLP3-transgenic mice to evaluate target engagement and off-tumor toxicity .

    • Dose optimization: Apply a factorial DOE (Design of Experiments) to assess variables like pH, temperature, and antibody concentration .

Methodological Comparisons

Table 1: PLP3 Antibody Validation Techniques

MethodApplicationAdvantagesLimitations
Western BlotSpecificity confirmationHigh specificity, cost-effectiveRequires knockout controls
ELISAQuantitative titer measurementHigh throughputMay miss conformational epitopes
SPR (Biacore)Affinity/specificity profilingReal-time kineticsExpensive instrumentation

Table 2: Expression Systems for Recombinant PLP3 Antibodies

SystemYield (mg/L)Glycosylation ProfileIdeal Use Case
HEK29350-100Human-likeEarly-stage screening
CHO200-500Low fucosylationTherapeutic development

Addressing Technical Challenges

How can cross-reactivity with PLP family members be minimized?

  • Solution:

    • Epitope-focused engineering: Use phage display to select antibodies targeting PLP3-unique regions (e.g., residues 120-135) .

    • Competitive ELISA: Pre-incubate antibody with PLP1/PLP2 to absorb cross-reactive clones .

What computational tools aid in predicting PLP3-antibody interactions?

  • Tools:

    • AlphaFold-Multimer: Predicts antibody-antigen docking interfaces using PLP3 structural data .

    • RosettaAntibody: Designs mutations to enhance binding energy (e.g., ΔΔG ≤ -2 kcal/mol) .

Data Interpretation

How should researchers interpret low signal-to-noise ratios in PLP3 IHC?

  • Troubleshooting steps:

    • Validate antigen retrieval conditions (e.g., citrate buffer pH 6.0 vs. EDTA pH 9.0).

    • Optimize antibody dilution (test 1:100 to 1:1000 ranges) .

    • Use tyramide signal amplification for low-abundance targets .

What statistical approaches are recommended for PLP3 expression analysis in heterogeneous samples?

  • Recommendations:

    • Mixed-effects models: Account for batch variability (e.g., antibody lot, staining date) .

    • ROC curves: Determine optimal cutoff values for positivity in flow cytometry .

Emerging Applications

Can PLP3 antibodies be leveraged for targeted drug delivery?

  • Proof of concept:

    • ADC development: Conjugate PLP3 antibodies with pyrrolobenzodiazepine (PBD) toxins via cleavable linkers (e.g., maleimide-PEG4-valine-citrulline) .

    • In vitro efficacy: Achieve IC50 ≤ 10 nM in PLP3+ cancer cell lines (e.g., NCI-H446) .

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