Here’s a curated collection of FAQs for PMEI6 antibody in academic research, structured by complexity and grounded in experimental evidence:
Use pmei6 knockout mutants (e.g., pmei6-1) as negative controls .
Compare with 35S:PMEI6 overexpression lines for antibody signal intensity .
Combine with enzymatic activity assays (e.g., PME inhibition tests) to correlate antibody labeling with functional outcomes .
Conflicting data often arise from tissue-specific PMEI6 expression or pathogen/pest models. Advanced strategies:
Contextual phenotyping: Compare mucilage release (seed coat) vs. pathogen response (leaves) in the same mutant .
HG methylation profiling: Use combinatorial antibody panels (e.g., LM20 for high esterification, LM19 for low esterification) to map spatial patterns .
Example contradiction: PMEI6 overexpression enhances Botrytis resistance but has no effect on aphid susceptibility. Resolution involves:
PMEI6 regulates a balance between wall rigidity (via peroxidase anchoring) and flexibility (via pectin de-methylesterification). Key methodologies:
Immunolocalization: Track PRX36 recruitment using LM20-labeled HG domains .
Biomechanical assays: Measure mucilage extrusion force in pmei6 vs. wild-type seeds .
| Parameter | Tool/Assay | Outcome in pmei6 Mutants |
|---|---|---|
| HG methylesterification | JIM7/LM20 labeling | Absent in cell wall fragments |
| Wall brittleness | Seed hydration time-lapse | Delayed mucilage release |
Integrate antibody-based observations with:
Transcriptomics: Analyze PMEI6 expression under GLABRA2 or MYB52 regulation .
Enzyme kinetics: Measure PMEI6’s inhibitory constant (Kᵢ) against PME isoforms .
Structural biology: Use homology modeling to predict PMEI6-PME interaction sites .