PPP3R1 Antibody

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Product Specs

Buffer
PBS with 0.1% Sodium Azide, 50% Glycerol, pH 7.3. Stored at -20°C. Avoid freeze-thaw cycles.
Lead Time
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Synonyms
alpha isoform (calcineurin B; type I) antibody; calcineurin B; type I (19kDa) antibody; Calcineurin subunit B type 1 antibody; CALNB1 antibody; CANB1_HUMAN antibody; Cna2 antibody; CNB antibody; CNB1 antibody; OTTHUMP00000201960 antibody; OTTHUMP00000201961 antibody; Ppp3r1 antibody; PPP3R1 protein phosphatase 3 (formerly 2B); regulatory subunit B; alpha isoform antibody; protein phosphatase3 (formerly2B); regulatory subunit B; alpha isoform antibody; Protein phosphatase 2B regulatory subunit 1 antibody; Protein phosphatase 2B regulatory subunit B alpha antibody; protein phosphatase 3 (formerly 2B); regulatory subunit B; 19kDa; alpha isoform (calcineurin B; type I) antibody; Protein phosphatase 3 (formerly 2B); regulatory subunit B (19kD); alpha isoform (calcineurin B; type I) antibody; Protein phosphatase 3 regulatory subunit B alpha antibody; Protein phosphatase 3 regulatory subunit B alpha isoform 1 antibody
Target Names
Uniprot No.

Target Background

Function
PPP3R1 encodes the regulatory subunit of calcineurin, a calcium-dependent, calmodulin-stimulated protein phosphatase. This subunit plays a crucial role in conferring calcium sensitivity to the enzyme.
Gene References Into Functions
  • Studies have shown that PPP3R1 expression is decreased in both psoriatic lesions and HaCaT cells. PMID: 29181737
  • The 5I/5D variation in the CnB gene has been linked to an increased risk of coronary artery disease (CAD). This deletion leads to elevated serum calcineurin levels. PMID: 28827117
  • Research indicates that exogenous CnB is taken up by cells through a time- and concentration-dependent mechanism involving clathrin-dependent receptor-mediated internalization. This uptake is mediated by the TLR4/MD2 complex in conjunction with the co-receptor CD14. PMID: 27090571
  • CnB has been identified as a novel host-derived immunostimulatory factor. It acts as an agonist in monocytes and specifically activates TLR4 signaling through TRAF3 and TRAF6 in response to various stimuli. PMID: 26471241
  • Data from both micro-dissected trophoblasts and the trophoblastic BeWo cell line suggest that microRNA-512-3p plays a role in placental function by targeting PPP3R1, the gene encoding the regulatory subunit of calcineurin B. PMID: 24246042
  • Evidence suggests that specific variations in MAPT (rs3785883) and PPP3R1 (rs1868402) are associated with accelerated progression of Alzheimer's disease. PMID: 23727081
  • Studies have not found significant differences in the expression levels of PPP3R1, GATA4, and NFATC4 genes in various patient subgroups. PMID: 23888774
  • Pancreatic beta cells lacking Cnb1 exhibit a failure to express genes that are direct NFAT targets and are essential for replication, insulin storage, and secretion. PMID: 22814600
  • Research reveals a novel signaling pathway (CnB-CD11b-NF-kappaB-TRAIL) that regulates TRAIL expression. This finding may contribute to a better understanding of the role of the calcineurin B subunit in innate immunity regulation. PMID: 22197822
  • CnB serves as an immunostimulatory protein and functions as a vaccine adjuvant, inducing protective cellular and humoral responses against pneumococcal infection. PMID: 21722668
  • The CnB M118K variant is unable to enhance the activities of NF-AT and p53 induced by CnA in HeLa-s cells. PMID: 21910968
  • CNB interacts with proteasome subunit alpha type 7 (PSMA7) and inhibits the transactivation activity of hypoxia-inducible factor-1alpha (HIF-1alpha) through the proteasome pathway. PMID: 21256111
  • Findings suggest novel roles for calcineurin and NF-kappaB in successful IS maturation. PMID: 17038582
  • Endothelin 1 (ET-1) activates calcineurin and induces nuclear translocation of NFATc1, implicating this pathway in the ET-1-mediated stimulation of osteoblasts. PMID: 17237284
  • Polymorphisms in the IGF-1/PPP3R1 genes influence muscle phenotypic responses to strength training in both black and white older men and women. PMID: 17761791
  • Studies have not observed significant differences in calcineurin b expression between patients with schizophrenia and normal controls. PMID: 18343007
  • Overexpression of the calcineurin B subunit enhances the oncogenic potential of HEK293 cells. PMID: 18422742
  • Research suggests that while the calcineurin/NFAT signaling pathway plays a critical and non-redundant role in regulating lymphocyte developmental checkpoints, it is not essential for the development of blood myeloid lineages. PMID: 18818667
  • The CNB gene 5I/5D polymorphism is associated with the risk of left ventricular hypertrophy and physical performance in athletes. PMID: 18825932

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Database Links

HGNC: 9317

OMIM: 601302

KEGG: hsa:5534

STRING: 9606.ENSP00000234310

UniGene: Hs.280604

Protein Families
Calcineurin regulatory subunit family
Subcellular Location
Cytoplasm, cytosol. Cell membrane. Cell membrane, sarcolemma. Cell membrane; Lipid-anchor.

Q&A

What is PPP3R1 and what cellular functions does it mediate?

PPP3R1 (protein phosphatase 3, regulatory subunit B, alpha isoform) functions as the regulatory component of calcineurin, a calcium-dependent serine/threonine phosphatase. The protein is a critical regulatory subunit B that forms a heterodimer with a 59 kDa catalytic A subunit . This complex is activated through calcium ion binding and calmodulin interaction, enabling the enzyme to dephosphorylate serine and threonine residues in target proteins . Calcineurin's highest expression occurs in brain tissue, suggesting significant roles in neural functions including learning and memory processes . The enzyme's activity regulates numerous substrates, most notably the NFAT transcription factor, which becomes activated following dephosphorylation . Additionally, research indicates potential involvement of calcineurin in cardiac hypertrophy development and immunological processes related to organ transplantation, highlighting its broad physiological significance .

What are the molecular characteristics of PPP3R1 protein that researchers should understand?

The PPP3R1 protein consists of 170 amino acids with a calculated molecular weight of 19 kDa, which matches the observed weight in experimental conditions . The protein is encoded by the PPP3R1 gene (NCBI Gene ID: 5534, GenBank Accession: BC027913), and has the UniProt ID P63098 . As the regulatory subunit of calcineurin, PPP3R1 exhibits notable conservation across species, demonstrating cross-reactivity among human, mouse, and rat samples, which facilitates comparative research across these model organisms . The protein's structural features enable it to bind calcium ions, which is essential for calcineurin complex activation. Understanding these molecular characteristics is crucial for designing experiments involving protein-protein interactions, mutational analysis, or functional studies of calcineurin activity in various physiological and pathological contexts.

How does PPP3R1 expression vary across tissues and experimental models?

Research demonstrates that PPP3R1 expression is detectable across multiple tissue types with varying abundance. Western blot analyses have confirmed PPP3R1 presence in mouse and rat brain tissues, human stomach tissue, and various cell lines including HeLa and K-562 . While calcineurin is expressed in numerous tissues throughout the body, its highest concentration is found in brain tissue, correlating with its proposed functions in neurological processes . This differential expression pattern must be considered when selecting appropriate positive controls for antibody validation. For instance, mouse brain tissue, HeLa cells, human stomach tissue, K-562 cells, and rat brain tissue have all been validated as positive controls for Western blot applications . Similarly, for immunohistochemistry applications, mouse testis tissue and human brain tissue have been confirmed as reliable positive controls . These tissue-specific expression patterns inform experimental design decisions, particularly for researchers investigating tissue-specific functions of the calcineurin signaling pathway.

What criteria should guide selection of the appropriate PPP3R1 antibody for specific research applications?

When selecting a PPP3R1 antibody, researchers must consider several critical factors to ensure experimental success. First, evaluate the validated applications for each antibody option - for example, product 13210-1-AP has been validated for Western blot (WB), immunohistochemistry (IHC), immunofluorescence (IF), immunoprecipitation (IP), and ELISA applications . Second, confirm species reactivity matches your experimental model; available antibodies show reactivity with human, mouse, and rat samples, with some citations indicating potential chicken reactivity . Third, consider the antibody class and host - polyclonal antibodies like 13210-1-AP (Rabbit IgG) offer high sensitivity but may have more batch-to-batch variation than monoclonal options like CALNB/2342 (Mouse) . Fourth, examine the immunogen information to understand what protein region is targeted, which affects epitope accessibility in different applications. Finally, review published literature citing the antibody to assess real-world performance in experimental conditions similar to your planned studies.

What protocols ensure proper validation of PPP3R1 antibody specificity?

Rigorous validation of PPP3R1 antibody specificity requires a multi-faceted approach. Begin with positive and negative control samples; recommended positive controls include mouse brain tissue, HeLa cells, human stomach tissue, K-562 cells, and rat brain tissue for Western blot applications . For negative controls, utilize tissues known to express minimal PPP3R1 or employ knockdown/knockout models where PPP3R1 expression is significantly reduced. Western blot validation should confirm a single band at the expected molecular weight of 19 kDa . For immunoprecipitation validation, researchers should perform reciprocal co-IP experiments using antibodies against known interaction partners. For immunohistochemistry applications, blocking peptide competition assays provide strong evidence of specificity - pre-incubating the antibody with excess immunizing peptide should abolish or significantly reduce signal. Finally, employing multiple antibodies targeting different epitopes of PPP3R1 and comparing staining patterns provides additional confirmation of specificity. These rigorous validation steps are essential before proceeding to experimental applications to ensure reliable and reproducible results.

What are the optimal sample preparation techniques for different PPP3R1 detection methods?

Sample preparation techniques must be optimized for each detection method to ensure reliable PPP3R1 detection. For Western blot applications, tissue samples should be homogenized in RIPA buffer containing protease inhibitors, while cell lines may be directly lysed in the same buffer. Protein concentration determination using Bradford or BCA assays is essential prior to loading 20-50 μg of total protein per well. For immunohistochemistry applications with PPP3R1 antibodies, optimal results require specific antigen retrieval methods - data indicates that TE buffer at pH 9.0 is recommended, though citrate buffer at pH 6.0 may serve as an alternative . Tissue sections typically require 5-10 μm thickness for optimal antibody penetration and signal development. For immunoprecipitation, 0.5-4.0 μg of antibody should be used for 1.0-3.0 mg of total protein lysate . When performing ELISA, sample preparation depends on the source material - the assay has been validated for rat serum, plasma, cell culture supernatants, and tissue homogenates . Regardless of detection method, samples should be processed fresh or properly stored (-80°C for protein extracts, fixed appropriately for tissue sections) to prevent protein degradation that could affect PPP3R1 detection.

What dilution parameters and detection protocols yield optimal results for different PPP3R1 antibody applications?

Optimal antibody dilution varies significantly across applications, requiring careful titration for each experimental system. For Western blot applications using antibody 13210-1-AP, the recommended dilution range is remarkably broad at 1:5000-1:50000, necessitating optimization for specific sample types . Immunohistochemistry applications typically require more concentrated antibody, with recommended dilutions of 1:500-1:2000 . For immunoprecipitation, the protocol calls for 0.5-4.0 μg of antibody per 1.0-3.0 mg of total protein lysate . When developing detection protocols, Western blots typically employ HRP-conjugated secondary antibodies with chemiluminescent substrates, while IHC applications may use either chromogenic (DAB) or fluorescent detection systems. For optimal visualization in IHC applications using PPP3R1 antibody, antigen retrieval is crucial, with data indicating superior results using TE buffer at pH 9.0, though citrate buffer at pH 6.0 serves as an acceptable alternative . In all applications, researchers should include appropriate controls and perform preliminary dilution series experiments to determine the optimal antibody concentration that maximizes specific signal while minimizing background for their particular experimental system.

How should researchers analyze and interpret ELISA data when quantifying PPP3R1 levels?

ELISA-based quantification of PPP3R1 requires careful attention to data analysis and interpretation. The Rat Calcineurin subunit B type 1 ELISA Kit employs a sandwich enzyme immunoassay technique with a detection range of 0.16-10 ng/mL and sensitivity typically below 0.039 ng/mL . For data analysis, first calculate the mean absorbance for all standards, controls, and samples, subtracting the zero standard optical density value. Generate a standard curve using four-parameter logistic (4-PL) curve-fitting software, plotting mean absorbance against concentration on a log/log scale . Alternatively, logarithmic transformation of both PPP3R1 concentrations and optical density values enables linear regression analysis . For sample concentration determination, apply the standard curve equation to measured absorbance values, multiplying by any dilution factor used in sample preparation . To ensure validity, the assay demonstrates high specificity with no significant cross-reactivity reported, intra-plate precision with CV<10%, and inter-plate precision with CV<15% . Recovery rates average 95% (range 87-96%) in cell culture media and 85% (range 81-102%) in serum samples . Additionally, linearity testing across serial dilutions (1:2, 1:4, 1:8, 1:16) shows acceptable performance with averages of expected concentration ranging from 90-117% in cell culture media and 92-99% in serum . These parameters should be considered when evaluating the reliability of quantitative PPP3R1 measurements.

What troubleshooting strategies address common challenges in PPP3R1 detection experiments?

When working with PPP3R1 antibodies, researchers may encounter several common challenges requiring specific troubleshooting approaches. For weak or absent Western blot signals, first verify protein transfer efficiency using reversible staining methods, then optimize antibody concentration (testing the broad 1:5000-1:50000 range recommended for product 13210-1-AP) . Extended exposure times and enhanced chemiluminescent substrates may improve signal detection. For high background in immunohistochemistry applications, increase blocking time or concentration, optimize antibody dilution within the recommended 1:500-1:2000 range, and ensure thorough washing between steps . If antigen retrieval appears insufficient, compare results between recommended TE buffer (pH 9.0) and alternative citrate buffer (pH 6.0) methods . For immunoprecipitation difficulties, verify antibody-to-lysate ratios are within the recommended 0.5-4.0 μg antibody per 1.0-3.0 mg protein range . In ELISA applications, if measured values fall outside the standard curve, dilute samples appropriately to bring readings within the 0.16-10 ng/mL detection range . For all applications, ensure proper storage of antibody (recommended at -20°C in aliquots) and use positive controls (mouse brain tissue, HeLa cells, human stomach tissue, K-562 cells, or rat brain tissue for Western blot) to verify experimental procedures.

How can PPP3R1 antibodies be employed to investigate calcineurin pathway activation mechanisms?

PPP3R1 antibodies provide powerful tools for investigating the mechanisms of calcineurin pathway activation across various experimental systems. Researchers can employ co-immunoprecipitation (co-IP) techniques using PPP3R1 antibody to analyze dynamic interactions between the regulatory B subunit and the catalytic A subunit under different calcium concentrations, providing insights into complex formation dynamics . Combining this approach with antibodies targeting calmodulin allows for characterization of the complete activation complex. Immunofluorescence applications using PPP3R1 antibody enable visualization of subcellular localization changes following pathway stimulation, potentially revealing translocation patterns that correspond with activation states . For quantitative assessment of pathway activation, researchers can couple PPP3R1 detection with phosphorylation-specific antibodies targeting known downstream substrates such as NFAT transcription factors, creating a comprehensive picture of pathway activity . Additionally, chromatin immunoprecipitation (ChIP) experiments using PPP3R1 antibody can identify potential associations with nuclear factors, expanding our understanding of calcineurin's role beyond cytoplasmic signaling. These advanced applications provide mechanistic insights into how calcium signals are translated into phosphatase activity through the calcineurin complex in both physiological and pathological contexts.

What experimental approaches can assess the relationship between PPP3R1 polymorphisms and cardiovascular phenotypes?

Research has established connections between PPP3R1 genetic variations and cardiovascular phenotypes, requiring sophisticated experimental approaches for further investigation. The five base-pair insertion/deletion polymorphism (rs3039851) in the PPP3R1 gene has been associated with left ventricular hypertrophy in both hypertensive patients and athletes, as well as with left ventricular mass variation in healthy newborns . To investigate these relationships, researchers should consider a multi-modal approach combining genetic, molecular, and physiological techniques. Genotyping via PCR-RFLP analysis of genomic DNA enables identification of the rs3039851 polymorphism and stratification of research subjects . Two-dimensional M-mode echocardiography provides quantitative assessment of left ventricular mass standardized for body metrics (LVM/BM, LVM/BL, or LVM/BSA) . Western blot analysis using PPP3R1 antibody can quantify protein expression levels across different genotype groups to determine whether polymorphisms affect translation efficiency. Functional studies in cellular models may employ site-directed mutagenesis to recreate polymorphic variants, followed by calcineurin activity assays to assess functional consequences. Additionally, immunohistochemistry using PPP3R1 antibody on cardiac tissue samples from different genotype carriers can reveal potential differences in protein localization or expression patterns. These integrated approaches provide comprehensive assessment of how genetic variations in PPP3R1 contribute to cardiovascular phenotypes through altered protein function or expression.

How can researchers design experiments to investigate PPP3R1's role in pathological cardiac remodeling?

Investigating PPP3R1's role in pathological cardiac remodeling requires carefully designed experiments integrating molecular, cellular, and physiological approaches. Researchers should first establish appropriate model systems, including pressure-overload models (transverse aortic constriction), volume-overload models (aortocaval fistula), or genetic models of hypertrophy. Western blot analysis using PPP3R1 antibody (dilution 1:5000-1:50000) can track temporal changes in protein expression throughout disease progression . Immunohistochemistry (antibody dilution 1:500-1:2000) on cardiac sections enables spatial mapping of PPP3R1 expression changes within the myocardium, particularly when co-stained with markers of hypertrophy or fibrosis . For mechanistic insights, co-immunoprecipitation using PPP3R1 antibody can identify dynamic interaction partners during disease development . Functional studies may incorporate calcineurin inhibitors (cyclosporine or FK506) to assess whether blocking the pathway prevents or reverses remodeling . Additionally, genetic approaches using cardiomyocyte-specific PPP3R1 overexpression or knockdown models provide direct evidence of causality. To connect with clinical relevance, researchers can analyze PPP3R1 genotypes in patient cohorts, particularly focusing on the rs3039851 polymorphism, which has been associated with left ventricular mass variation . Echocardiographic assessment standardized for body metrics (LVM/BM, LVM/BL, or LVM/BSA) provides quantitative phenotyping in both animal models and human subjects . This comprehensive experimental approach can elucidate PPP3R1's specific contributions to pathological cardiac remodeling processes.

How should researchers reconcile conflicting results between different detection methods for PPP3R1?

When faced with discrepancies between different PPP3R1 detection methods, researchers should implement a systematic troubleshooting approach. First, evaluate each method's specific limitations - Western blot detects denatured protein and may miss conformational epitopes, while immunohistochemistry preserves spatial information but may suffer from fixation artifacts. Consider whether sample preparation differences might explain conflicts; for instance, the recommended antigen retrieval methods for IHC (TE buffer pH 9.0 or alternative citrate buffer pH 6.0) significantly impact epitope accessibility . Antibody characteristics also influence results - polyclonal antibodies like 13210-1-AP may recognize multiple epitopes, while monoclonal antibodies target single epitopes that could be masked in certain applications . When ELISA and Western blot results conflict, evaluate whether post-translational modifications affect antibody recognition in one method versus another. For definitive resolution, employ orthogonal validation techniques including multiple antibodies targeting different epitopes, or supplement with mass spectrometry analysis for unbiased protein identification. Consider biological variables that might explain genuine differences, such as splice variants or tissue-specific post-translational modifications. Finally, compare your findings with published literature, particularly reports using the same antibody clones under similar experimental conditions, to determine whether discrepancies represent novel biological insights or technical artifacts.

What statistical approaches are appropriate for analyzing PPP3R1 expression data in genetic association studies?

Genetic association studies investigating PPP3R1 expression require rigorous statistical approaches to establish valid correlations between genotypes and phenotypes. When analyzing relationships between PPP3R1 polymorphisms (such as rs3039851) and phenotypic measurements like left ventricular mass, researchers should first determine appropriate categorical groupings - for example, grouping individuals homozygous for the reference allele (5I/5I) versus those carrying at least one 5D allele (5I/5D + 5D/5D) . For continuous phenotypic variables, standardization for confounding factors is essential; left ventricular mass measurements should be standardized for body mass (LVM/BM), body length (LVM/BL), or body surface area (LVM/BSA) . Statistical comparison between genotype groups may begin with simple parametric (t-test) or non-parametric (Mann-Whitney) tests depending on data distribution. For more complex analyses, multivariate linear regression models enable adjustment for potential confounders. When examining distribution patterns across categorical outcomes, chi-square tests can assess whether certain genotypes are overrepresented within phenotypic categories, such as comparing genotype frequencies between upper and lower tertiles of standardized LVM measurements . Power calculations should be performed to ensure adequate sample size; the referenced study included 162 subjects, with 135 homozygous for the reference allele and 27 carrying at least one 5D allele . Finally, researchers should consider correcting for multiple comparisons when testing associations across various phenotypic measurements to control family-wise error rates.

What methodological considerations ensure reproducibility in PPP3R1 research across different laboratory settings?

Ensuring reproducibility in PPP3R1 research across different laboratories requires standardization of key methodological elements. First, antibody selection and validation must be thoroughly documented - researchers should report catalog numbers (e.g., 13210-1-AP), clone identifiers (e.g., CALNB/2342), and RRID numbers (e.g., AB_2252760) to enable precise replication . Detailed reporting of antibody dilutions is essential, particularly given the broad recommended ranges (e.g., 1:5000-1:50000 for Western blot applications) . Sample preparation protocols should specify buffer compositions, protein quantification methods, and storage conditions. For immunohistochemistry applications, antigen retrieval method specifications are critical; noting whether TE buffer (pH 9.0) or citrate buffer (pH 6.0) was used significantly impacts result interpretation . When measuring PPP3R1 levels via ELISA, researchers should report detection ranges (0.16-10 ng/mL), sensitivity limits (~0.039 ng/mL), and analysis methods (four-parameter logistic curve-fitting) . For genetic studies involving PPP3R1 polymorphisms, detailed PCR-RFLP protocols and primer sequences enable verification of genotyping accuracy . Positive control selection should be standardized based on validated samples (mouse brain tissue, HeLa cells, human stomach tissue, K-562 cells, or rat brain tissue for Western blot; mouse testis tissue or human brain tissue for IHC) . Finally, researchers should consider establishing centralized biobanks of reference samples with known PPP3R1 expression levels that can be distributed among laboratories to calibrate detection methods. These comprehensive methodological considerations ensure that findings related to PPP3R1 can be reliably reproduced across different research environments.

How can advanced imaging techniques enhance our understanding of PPP3R1 dynamics in living systems?

Advanced imaging technologies offer unprecedented opportunities to visualize PPP3R1 dynamics in living systems beyond traditional static antibody-based detection methods. Researchers can employ CRISPR-Cas9 gene editing to create knock-in fluorescent protein fusions with PPP3R1, enabling real-time visualization of protein localization and trafficking in living cells. This approach, combined with calcium indicators, can correlate PPP3R1 movements with calcium flux events. Super-resolution microscopy techniques (STORM, PALM, or STED) using fluorescently-labeled PPP3R1 antibodies can reveal nanoscale organization of PPP3R1 within the calcineurin complex, providing structural insights impossible with conventional microscopy. For tissue-level analysis, light-sheet microscopy of cleared organs immunostained with PPP3R1 antibody enables three-dimensional mapping of expression patterns throughout intact biological structures. Förster resonance energy transfer (FRET) sensors incorporating PPP3R1 can detect conformational changes associated with calcineurin activation states, providing functional readouts in real time. For in vivo applications, PET imaging with radiolabeled nanobodies derived from PPP3R1 antibodies could enable non-invasive tracking of calcineurin expression in animal models of disease. These advanced imaging approaches extend beyond traditional immunohistochemistry applications of PPP3R1 antibodies, offering dynamic information about protein behavior in physiologically relevant contexts.

What experimental approaches can determine how post-translational modifications regulate PPP3R1 function?

Post-translational modifications (PTMs) likely play critical roles in regulating PPP3R1 function, warranting sophisticated experimental approaches for comprehensive characterization. Researchers should begin with mass spectrometry-based proteomic analysis of immunoprecipitated PPP3R1 to identify modification sites including phosphorylation, acetylation, methylation, or ubiquitination. Western blot analysis using modification-specific antibodies in parallel with PPP3R1 antibody (13210-1-AP at 1:5000-1:50000 dilution) can confirm and quantify these modifications under various physiological conditions . To determine functional consequences, site-directed mutagenesis of identified modification sites followed by activity assays can establish causal relationships between specific PTMs and calcineurin function. Temporal dynamics of modifications can be tracked using pulse-chase experiments combined with PPP3R1 immunoprecipitation. For spatial analysis, immunofluorescence microscopy using PPP3R1 antibody alongside PTM-specific antibodies can reveal whether modifications correlate with particular subcellular localizations. To identify enzymes responsible for adding or removing these modifications, candidate approach screening (kinases, phosphatases, acetyltransferases, etc.) or proximity labeling techniques (BioID, APEX) coupled with PPP3R1 immunoprecipitation can identify regulatory enzyme interactions. Finally, in silico structural modeling based on crystal structures can predict how specific modifications might alter protein conformation or interaction interfaces. This multi-faceted approach will illuminate how PPP3R1 function is dynamically regulated through post-translational modifications in different cellular contexts.

How might PPP3R1-targeted therapeutic approaches evolve based on current research findings?

Current research findings suggest several promising avenues for evolving PPP3R1-targeted therapeutic approaches with potential applications in multiple disease contexts. Building upon the established connection between PPP3R1 polymorphisms and left ventricular mass/hypertrophy , researchers might develop allele-specific therapeutic strategies that target the functional consequences of specific genetic variants, such as the rs3039851 polymorphism. The known inhibition of calcineurin by cyclosporine and FK506 complexes offers a foundation for developing next-generation inhibitors with improved specificity for PPP3R1-mediated pathways while reducing off-target effects . Structure-based drug design informed by PPP3R1's interaction interfaces could yield small molecules that modulate specific protein-protein interactions rather than blocking all calcineurin activity. For genetic approaches, antisense oligonucleotides or RNA interference technologies targeting PPP3R1 could provide tissue-specific modulation of expression levels. Given calcineurin's roles in cardiac hypertrophy and immune responses , therapeutic development should include careful phenotypic screening across multiple organ systems to identify tissue-specific modulators. As diagnostic companions to these therapeutics, antibody-based assays for PPP3R1 could help identify patients most likely to benefit from targeted interventions. The development pathway would benefit from validation in physiologically relevant model systems before advancing to clinical applications. These evolving therapeutic approaches represent translational extensions of basic research findings on PPP3R1 biology and function.

What controls are essential for multiparametric flow cytometry experiments involving PPP3R1 detection?

Multiparametric flow cytometry for PPP3R1 detection requires rigorous controls to ensure valid and interpretable results. First, fluorescence-minus-one (FMO) controls, which include all fluorochromes except the one conjugated to the PPP3R1 antibody, are essential for defining positive population boundaries and accounting for spectral overlap. Since PPP3R1 is primarily an intracellular target, isotype controls matching the PPP3R1 antibody's host species and isotype (Rabbit IgG for 13210-1-AP) are critical for establishing background staining levels associated with non-specific binding following permeabilization procedures . Biological negative controls (cell types with minimal PPP3R1 expression) and positive controls (cell types with confirmed expression such as HeLa cells) should be included in each experimental run . For phospho-specific PPP3R1 detection, additional controls including phosphatase-treated samples help verify signal specificity. When developing a new flow cytometry panel incorporating PPP3R1, antibody titration experiments are essential to determine optimal concentration that maximizes signal-to-noise ratio. For multicolor applications, compensation controls using single-stained samples are necessary to correct for spectral overlap between fluorochromes. Finally, when analyzing samples from multiple time points or treatment conditions, standardized beads should be included to ensure consistent instrument performance and enable accurate comparison between experiments. These comprehensive controls ensure reliable PPP3R1 detection in complex flow cytometry applications.

How can researchers optimize chromatin immunoprecipitation (ChIP) protocols using PPP3R1 antibody?

While PPP3R1 is not typically considered a DNA-binding protein, optimizing chromatin immunoprecipitation (ChIP) protocols using PPP3R1 antibody may reveal important associations with chromatin-bound complexes mediating calcineurin's effects on gene expression. For successful PPP3R1 ChIP experiments, researchers should first validate the antibody's capacity for immunoprecipitation; antibody 13210-1-AP has been confirmed for IP applications in HeLa cells, making it a potential candidate . Crosslinking optimization is critical - traditional 1% formaldehyde fixation for 10 minutes may be sufficient, but dual crosslinking with DSG (disuccinimidyl glutarate) followed by formaldehyde might better preserve protein-protein interactions that connect PPP3R1 to chromatin. Sonication conditions should be carefully optimized to generate chromatin fragments of 200-500 bp while preserving protein epitopes. For immunoprecipitation, using 2-5 μg of PPP3R1 antibody per ChIP reaction is recommended as a starting point, based on the standard IP range of 0.5-4.0 μg for other applications . Including appropriate controls is essential: IgG negative control from the same host species (Rabbit), input samples (non-immunoprecipitated chromatin), and positive control IP targeting known DNA-binding factors that interact with calcineurin (such as NFAT). Given that PPP3R1 likely associates with chromatin indirectly, sequential ChIP (re-ChIP) protocols may help identify specific DNA-binding partners mediating these interactions. qPCR primer design should focus on promoter regions of genes known to be regulated by calcineurin signaling pathways for initial validation.

What considerations are important when developing sandwich ELISA assays for PPP3R1 quantification across diverse sample types?

Developing robust sandwich ELISA assays for PPP3R1 quantification requires careful consideration of several technical parameters to ensure accuracy across diverse sample types. Antibody pair selection is fundamental - capture and detection antibodies must recognize distinct, non-overlapping epitopes on PPP3R1 while maintaining specificity across species if cross-reactivity is desired. The established Rat Calcineurin subunit B type 1 ELISA kit demonstrates successful implementation of this approach . Standard curve preparation requires purified recombinant PPP3R1 protein, with the working range established at 0.16-10 ng/mL for optimal quantification . Sample preparation protocols must be optimized for each biological matrix - the validated ELISA performs well with rat serum (recovery 85%, range 81-102%), plasma, cell culture supernatants (recovery 95%, range 87-96%), and tissue homogenates . Matrix effects can significantly impact assay performance, necessitating dilution optimization for each sample type; linearity testing across serial dilutions (1:2, 1:4, 1:8, 1:16) should verify consistent recovery percentages across the concentration range . For quality control, intra-plate precision should achieve CV<10% and inter-plate precision CV<15% . Assay specificity must be rigorously evaluated against potential cross-reactants, particularly other calcineurin subunits or related phosphatases . Finally, assay validation should include spike-recovery experiments, demonstrating acceptable recovery rates (ideally 80-120%) across the working range in each sample type to be tested . These comprehensive considerations ensure reliable PPP3R1 quantification in diverse experimental settings.

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