Typographical error: "pzh1" may be a misspelling of ZO-1 (Zona Occludens-1), a well-characterized tight junction protein targeted by antibodies such as ab216880 and MABT11 .
Alternative naming conventions: Some antibodies adopt project-specific codes (e.g., AK105 for penpulimab ), but no such designation aligns with "pzh1" in the provided materials.
The search results focus on:
None of these categories reference "pzh1."
| Action | Rationale |
|---|---|
| Verify nomenclature | Confirm spelling or explore alternative naming (e.g., ZO-1, PD-1). |
| Expand search scope | Investigate proprietary databases (e.g., CAS Registry, Patents) for unpublished/in-development compounds. |
| Consult domain experts | Reach out to immunology or biotechnology specialists for clarification. |
While "pzh1" remains unidentified, insights from analogous antibodies in the search results may guide future research:
KEGG: spo:SPAC57A7.08
STRING: 4896.SPAC57A7.08.1
Size-exclusion chromatography-HPLC (SEC-HPLC) is essential for determining antibody purity and integrity. When characterizing pzh1 Antibody, researchers typically achieve 95% purity using protein A affinity chromatography followed by SEC-HPLC . The methodology involves:
Initial purification via affinity chromatography
Secondary purification using S200 10/300 GL columns
Analysis of chromatograms for peak integrity and purity percentage
Validation of molecular weight (~150 kDa for intact IgG)
Documentation of purification efficiency for reproducibility
SEC-HPLC should reveal a predominant peak corresponding to monomeric antibody with minimal aggregation or fragmentation products .
Comprehensive structural validation requires multiple analytical approaches:
SDS-PAGE analysis under both non-reducing conditions (showing intact antibody at ~150 kDa) and reducing conditions (revealing heavy chains at ~50 kDa and light chains at ~25 kDa)
Native mass spectrometry to confirm intact mass and assess glycosylation patterns
Circular dichroism for secondary structure confirmation
Thermal shift assays to evaluate conformational stability
Functional binding assays to ensure epitope recognition is preserved
This multi-method approach ensures both structural and functional integrity are maintained through purification processes .
Buffer optimization is critical for maintaining antibody stability during storage and experimental procedures. Key considerations include:
| Buffer Component | Optimization Range | Purpose |
|---|---|---|
| pH | 6.5-7.5 | Maintain native conformation |
| Salt concentration | 150-300 mM NaCl | Reduce non-specific interactions |
| Stabilizers | 0.01-0.05% Tween-20 | Prevent aggregation |
| Preservatives | 0.02% sodium azide | Inhibit microbial growth |
| Cryoprotectants | 5-10% glycerol | Prevent freeze-damage |
Stability should be monitored over time using SEC-HPLC and functional binding assays to ensure experimental reproducibility .
SPR provides crucial kinetic data about antibody-antigen interactions. Based on established protocols for human antibodies:
Immobilize target protein on CM5 sensor chip using amine coupling chemistry
Create reference surface by activating with EDC/NHS and blocking with ethanolamine
Test antibody concentrations ranging from 0.13-33.3 nM (typically 6 concentrations in a 3-fold dilution series)
Analyze reference-subtracted sensorgrams using appropriate binding models
Calculate association (ka), dissociation (kd) rate constants and equilibrium dissociation constant (KD)
This methodology provides quantitative binding parameters essential for comparing different antibody constructs or evaluating effects of modifications .
Comprehensive immunoreactivity testing requires:
Cell selection: Choose cell lines with validated target expression
Flow cytometry protocol:
Optimize antibody concentration (typically 0.1-10 μg/mL)
Include appropriate isotype controls
Use secondary detection reagents with minimal background
Competitive binding assays to determine specificity
Calculation of immunoreactive fraction (target >90% for research applications)
Correlation of binding with target expression levels across multiple cell lines
For modified antibodies (e.g., conjugated to chelators), these assays are essential to confirm that modifications don't impair target recognition .
Computational modeling provides structural insights into antibody-antigen binding:
Prepare antibody and target protein structures using Schrödinger's Biologics Suite or equivalent
Implement protein-protein docking with 1.2 Å grid cell size
Cluster results with 10 Å cube size
Analyze interactions using protein interaction visualization tools
Validate predictions through mutagenesis or epitope mapping experiments
These in silico approaches can guide experimental design and help interpret contradictory binding data across different assay platforms .
Chelator conjugation for subsequent radiolabeling requires careful optimization:
Determine optimal molar ratio: Testing various chelator-to-antibody ratios (typically 1:1 to 5:1) reveals that a ratio of approximately 1:1 maintains optimal in vivo pharmacokinetics
Reaction conditions: pH 8.5-9.0, 37°C, 1-2 hours in bicarbonate buffer
Purification: Size exclusion chromatography to remove unreacted chelator
Quality control: Measure chelator-to-antibody ratio via UV-vis spectroscopy
Functional validation: Confirm retained immunoreactivity post-conjugation (target >96%)
The DFO-to-antibody ratio significantly impacts in vivo behavior, with lower ratios (approximately 1:1) demonstrating superior tumor targeting and reduced liver uptake .
Effective radiolabeling protocols include:
Reaction conditions:
pH: 7.0-7.5
Temperature: 37°C
Incubation time: 60 minutes
Quality control parameters:
Radiochemical purity: >99.9% by radio-TLC
Specific activity: approximately 0.37 MBq/μg
Immunoreactive fraction: >96%
Stability testing: Confirm stability in human serum at 37°C over 7 days
Storage conditions: 4°C for short-term or fractionated into single-use aliquots for freezing
These procedures ensure consistently high-quality radioimmunoconjugates for reproducible imaging studies .
When antibody modifications impact binding capacity, systematic troubleshooting involves:
| Problem | Diagnostic Approach | Solution Strategy |
|---|---|---|
| Aggregation | SEC-HPLC analysis | Optimize buffer conditions, add stabilizers |
| Chemical modification of binding site | Mass spectrometry | Redirect conjugation chemistry to non-CDR regions |
| Over-conjugation | Determine chelator-to-antibody ratio | Reduce molar equivalents of chelator |
| Conformational changes | Circular dichroism | Adjust reaction conditions to preserve structure |
| Purification losses | SDS-PAGE analysis of fractions | Optimize purification protocol |
Implementing multiparameter testing during optimization helps identify the specific cause of reduced immunoreactivity .
Systematic dose optimization is critical for maximizing signal-to-background ratios:
Test multiple protein doses (typically 2-20 mg/kg)
Evaluate impact of pre-injection with unlabeled antibody (e.g., 4 mg/kg "cold" antibody before tracer dose)
Compare tumor-to-muscle SUVmax ratios at different time points (days 2, 5, and 7 post-injection)
Analyze correlation between antibody dose and tumor uptake kinetics
Consider target expression levels across different tumor models to guide dosing strategy
Studies with [89Zr]Zr-labeled antibodies demonstrate that pre-injection with unlabeled antibody can significantly enhance tumor-to-background contrast (p<0.01) .
Optimized imaging protocols should include:
Animal preparation:
Consistent fasting and anesthesia protocols
Temperature maintenance during scan
Hydration status control
Acquisition parameters:
Static PET scans (10-20 minutes) at multiple time points
Attenuation correction for quantitative accuracy
Respiratory gating when applicable
Reconstruction settings:
Iterative reconstruction algorithms
Appropriate matrix size and filter selection
Analysis methods:
Acquisition timing significantly impacts contrast, with optimal imaging windows typically occurring 5-7 days post-injection for [89Zr]Zr-labeled antibodies .
Comprehensive biodistribution analysis requires:
In vivo PET imaging quantification:
ROI analysis across multiple tumor regions
Calculation of mean, maximum, and minimum SUV values
Assessment of coefficient of variation within tumors
Ex vivo gamma counting of harvested tissues:
Calculation of %ID/g for various organs
Determination of tumor-to-organ ratios
Statistical comparison across experimental groups
Autoradiography and immunohistochemistry correlation:
This multi-parameter approach provides insights into factors affecting antibody distribution and targeting efficacy .
Reconciling discrepancies requires systematic analysis:
Evaluate physiological factors:
Target accessibility differences in vitro versus in vivo
Impact of tumor microenvironment (pH, hypoxia, interstitial pressure)
Competition with endogenous ligands present in vivo
Consider technical variables:
Differences in antibody concentration between assays
Varying target expression levels across models
Different detection methods and their sensitivities
Implementation of validation approaches:
Multimodal validation helps establish the biological relevance of observed binding patterns and guides experimental refinement .
Rigorous statistical analysis includes:
Descriptive statistics:
Mean, median, standard deviation of SUVs and ratios
Box-and-whisker plots for data distribution visualization
Inferential statistics:
Paired t-tests for comparing time points within subjects
ANOVA with post-hoc tests for multi-group comparisons
Non-parametric alternatives when normality assumptions aren't met
Correlation analyses:
Pearson or Spearman correlation between PET metrics and ex vivo data
Multiple regression to identify predictors of antibody uptake
Significance threshold:
Establishing target-response relationships requires:
Longitudinal imaging studies:
Baseline PET imaging to quantify target availability
Serial imaging during treatment to assess target engagement
Correlation with therapeutic outcomes
Quantitative analysis:
SUVmax or tumor-to-blood ratio as target engagement metrics
Response assessment by RECIST or equivalent criteria
Kaplan-Meier analysis stratified by antibody uptake
Multivariate modeling:
This approach enables identification of imaging biomarkers that predict therapeutic efficacy and guide patient selection .
Clinical translation requires stringent quality metrics:
Identity and purity:
SEC-HPLC purity >95%
Confirmation of intact mass by mass spectrometry
Endotoxin testing (<5 EU/kg body weight)
Potency assays:
Immunoreactive fraction >90%
Consistent affinity metrics (KD)
Lot-to-lot variability assessment
Stability indicators:
Accelerated stability studies
Real-time stability monitoring
Freeze-thaw stability testing
Formulation requirements:
First-in-human studies require comprehensive chemistry and manufacturing documentation to support Investigational New Drug applications .
Radiation dosimetry assessment includes:
Time-activity measurements:
Serial PET imaging at multiple time points (1, 24, 72, 120, 168 hours)
Organ-specific ROI analysis for activity quantification
Physical decay correction
Dosimetry calculations:
Curve fitting for residence time determination
Application of S-values for dose conversion
Calculation of organ-specific absorbed doses
Risk assessment:
Identification of dose-limiting organs
Estimation of effective dose
Comparison with regulatory limits
Extrapolation to humans:
These studies establish radiation safety profiles essential for clinical translation .
Immunogenicity risk assessment and mitigation includes:
In silico analysis:
T-cell epitope prediction
Comparison with human germline sequences
Identification of potential immunogenic regions
In vitro screening:
Human PBMC assays for T-cell proliferation
Cytokine release assays
Dendritic cell activation assessment
Humanization strategies:
CDR grafting onto human frameworks
Surface residue engineering
Deimmunization of predicted T-cell epitopes
Clinical monitoring plan:
Fully human antibodies, like those developed using phage display libraries from human donors, generally present lower immunogenicity risk than chimeric or humanized antibodies .