pbs-4 Antibody

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Description

Definition and Context

Antibodies labeled with "PBS-4" typically denote formulations in PBS buffer without stabilizers like BSA or azides, optimized for downstream conjugation. For example:

  • Glypican 4 Antibody (83749-4-PBS): A recombinant rabbit monoclonal antibody targeting glypican 4 (GPC4), a heparan sulfate proteoglycan involved in cell growth regulation .

  • Storage: PBS-only buffer (1 mg/mL), enabling direct use in ELISAs, cytometric bead arrays, or multiplex assays .

Glypican 4 Antibody (83749-4-PBS)

ParameterDetails
Host/IsotypeRabbit IgG
ReactivityHuman
ApplicationsCytometric bead array, Indirect ELISA
ConjugateUnconjugated (ready for custom conjugation)
ImmunogenGlypican 4 fusion protein (Ag3670)
Molecular Weight62 kDa (556 amino acids)
Storage-80°C in PBS-only buffer (BSA/azide-free)
Clone240806D12

Source: Proteintech .

Research Applications

  • Matched Antibody Pairs: Used with detection antibody 83749-3-PBS for multiplex assays (e.g., Cytometric bead array) .

  • Functional Advantages: Recombinant production ensures batch-to-batch consistency and scalability .

Related Antibodies in PBS Formulations

While not explicitly named "PBS-4," other PBS-formulated antibodies include:

  • Thrombospondin-4 Antibody (MAB2390): Targets thrombospondin-4 (THSP4), a calcium-binding protein involved in extracellular matrix interactions .

    • Applications: Western blot, ELISA .

    • Reactivity: Human, with 93% sequence identity to mouse/rat THSP4 .

Mechanistic Insights from Analogous Antibodies

Studies on PBS-compatible antibodies highlight broader functional principles:

  • Pathogenicity: Anti-PF4 (platelet factor 4) antibodies in PBS formulations can induce thrombotic disorders (e.g., heparin-induced thrombocytopenia) by clustering PF4 tetramers, triggering platelet activation .

  • Autoimmune Effects: High-avidity anti-AQP4 antibodies (e.g., in neuromyelitis optica) penetrate the CNS via circumventricular organs, causing astrocyte damage .

Clinical and Preclinical Implications

  • Cancer Immunotherapy: Bispecific antibodies (e.g., anti-4-1BB×PDL1) in PBS-based buffers enhance CD8+ T-cell responses and synergize with anti-PD1 therapies .

  • Muscle Disorders: Anti-LTBP4 antibodies improve muscle function in dystrophy models by reducing TGFβ signaling .

Validation and Quality Control

  • Assay Compatibility: PBS-formulated antibodies are validated in ELISA, Western blot, and functional assays (e.g., HIPA test for platelet activation) .

  • Cross-Reactivity: Antibodies like THSP4 show species-specific reactivity (e.g., 50% cross-reactivity with mouse THSP4) .

Limitations and Considerations

  • Storage Stability: PBS-only formulations require ultra-low temperatures (-80°C) to prevent aggregation .

  • Titration Needs: Optimization is required for each application due to variable binding kinetics .

Future Directions

  • Conjugation Technologies: PBS-based antibodies are ideal for novel probes (e.g., fluorescent tags, nanoparticles) .

  • Therapeutic Development: Engineered bispecific antibodies (e.g., anti-CSPG4 IgE) show promise in melanoma models .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M Phosphate Buffered Saline (PBS), pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
pbs-4 antibody; T20F5.2 antibody; Proteasome subunit beta type-2 antibody; EC 3.4.25.1 antibody; Proteasome subunit beta 4 antibody
Target Names
pbs-4
Uniprot No.

Target Background

Function
This antibody targets a non-catalytic component of the proteasome, a multi-catalytic proteinase complex known for its ability to cleave peptides with arginine, phenylalanine, tyrosine, leucine, and glutamate residues adjacent to the leaving group at neutral or slightly basic pH. The proteasome exhibits ATP-dependent proteolytic activity.
Database Links

KEGG: cel:CELE_T20F5.2

STRING: 6239.T20F5.2.1

UniGene: Cel.20577

Protein Families
Peptidase T1B family
Subcellular Location
Cytoplasm. Nucleus.

Q&A

Basic Research Questions

How to validate PBS-4 antibody specificity for immunohistochemistry (IHC)?

  • Methodological approach:

    • Perform epitope mapping using truncated antigen variants or competitive binding assays with known ligands .

    • Validate via Western blotting under reducing/non-reducing conditions to confirm target band specificity .

    • Use knockout cell/animal models as negative controls to verify absence of non-specific binding .

What optimization steps are critical for PBS-4 antibody dilution in flow cytometry?

  • Key protocols:

    • Conduct titration assays across a dilution range (e.g., 1:50 to 1:800) using positive/negative control cells .

    • Optimize permeabilization with 0.01% saponin to maintain epitope accessibility while minimizing background .

    • Validate using compensation beads for spectral overlap correction in multispectral panels .

How to address non-specific binding in PBS-4 antibody applications?

  • Solutions:

    • Use pre-adsorbed secondary antibodies to minimize cross-reactivity with endogenous immunoglobulins .

    • Implement blocking buffers containing 5% species-matched serum or 1% BSA/0.01% saponin for intracellular targets .

    • Include isotype controls at matched protein concentrations to distinguish background signal .

Advanced Research Questions

How to resolve contradictory PBS-4 expression data across experimental models?

  • Analytical framework:

    Factor to InvestigateMethodologyValidation Source
    Post-translational modificationsTreat samples with phosphatase/protease inhibitors during lysis
    Species cross-reactivityTest antibody against recombinant proteins from human, mouse, and cynomolgus sources
    Tissue-specific epitope maskingCompare antigen retrieval methods (e.g., citrate vs. EDTA buffer)

How to design a multispectral panel including PBS-4 for mass cytometry?

  • Design principles:

    • Pair PBS-4 (lanthanide-labeled) with markers of distinct abundance (e.g., high-abundance CD45, low-abundance cytokines) .

    • Use metal isotope tags with minimal signal overlap (e.g., ¹⁶⁴Dy for PBS-4, ¹⁶⁰Gd for secondary markers) .

    • Validate panel using reference cell lines with known PBS-4 expression levels .

What strategies confirm PBS-4’s role in observed signaling pathways?

  • Functional validation:

    • Perform RNAi knockdown/CRISPR knockout followed by phospho-protein profiling (e.g., NFκB, MAPK) .

    • Use bimolecular fluorescence complementation (BiFC) to visualize PBS-4 interactions in live cells .

    • Analyze downstream effects via single-cell RNA sequencing in PBS-4⁺ vs. PBS-4⁻ populations .

Methodological Best Practices

  • Antibody validation: Require ≥3 independent validation methods (e.g., IHC, flow cytometry, knockout validation) from peer-reviewed studies .

  • Data reproducibility: Archive aliquots at -80°C with 1% BSA/0.01% sodium azide to prevent freeze-thaw degradation .

  • Conflict resolution: For discrepant results, re-analyze raw data using unmixing algorithms (e.g., FlowJo’s spectral unmixing) and confirm with orthogonal methods (e.g., microscopy) .

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