PSMC4 Antibody, HRP conjugated

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Description

Applications in Research

HRP-conjugated PSMC4 antibodies are optimized for high-sensitivity detection across multiple platforms:

ApplicationRecommended DilutionKey Findings
Western Blot (WB)1:500–1:2000 Detects endogenous PSMC4 (~43–50 kDa) in human, mouse, and rat tissues .
ELISA1:50,000–1:100,000 Quantifies PSMC4 with a sensitivity of <6.25 pg/mL .
Immunohistochemistry1:50–1:500 Localizes PSMC4 in formalin-fixed tissues (e.g., human colon cancer) .
Immunofluorescence1:200–1:800 Visualizes PSMC4 in cell lines (e.g., SH-SY5Y, HepG2) .

Validation and Specificity

  • Cross-Reactivity: Validated for human, mouse, and rat samples with no reported cross-reactivity to unrelated proteins .

  • Specificity: Confirmed via siRNA knockdown and immunoprecipitation assays .

  • Key Validation Data:

    • Recognizes both native and recombinant PSMC4 in WB .

    • Shows granular cytoplasmic staining in IHC, consistent with proteasomal localization .

HRP Conjugation Methodology

The HRP conjugation process involves maleimide-thiol chemistry using cross-linkers like Sulfo-SMCC, ensuring stable antibody-enzyme linkage .

Research Findings

  • Role in Protein Homeostasis: PSMC4 is critical for ATP-dependent unfolding of ubiquitinated proteins, aiding in cellular quality control .

  • Disease Associations:

    • Overexpression observed in hepatocellular carcinoma, linked to gankyrin interactions .

    • Modulated in neurodegenerative models (e.g., C9orf72 ALS/FTD) .

Case Studies

  • Cancer Research: PSMC4 knockdown reduced tumor growth in xenograft models, highlighting its role in oncogenesis .

  • Neurobiology: Antibody-based PSMC4 detection revealed proteasomal dysfunction in Alzheimer’s disease models .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Typically, we can ship your order within 1-3 business days of receiving it. Delivery times may vary depending on the shipping method and destination. For specific delivery timeframes, please consult your local distributor.
Synonyms
26S protease regulatory subunit 6B antibody; 26S proteasome AAA ATPase subunit RPT3 antibody; 26S proteasome AAA-ATPase subunit RPT3 antibody; MB67 interacting protein antibody; MB67-interacting protein antibody; MIP224 antibody; Protease 26S subunit 6 antibody; Proteasome (prosome macropain) 26S subunit ATPase 4 antibody; Proteasome 19S S6 antibody; Proteasome 26S subunit ATPase 4 antibody; Proteasome 26S subunit; ATPase; 4 antibody; PRS6B_HUMAN antibody; PSMC4 antibody; RPT3 antibody; S6 antibody; Tat binding protein 7 antibody; TAT-binding protein 7 antibody; TBP 7 antibody; TBP-7 antibody
Target Names
PSMC4
Uniprot No.

Target Background

Function
PSMC4 is a component of the 26S proteasome, a multi-protein complex essential for the ATP-dependent degradation of ubiquitinated proteins. This complex plays a crucial role in maintaining protein homeostasis by removing misfolded or damaged proteins, which could disrupt cellular functions, and by eliminating proteins that are no longer needed. Consequently, the proteasome is involved in a wide range of cellular processes, including cell cycle progression, apoptosis, and DNA damage repair. PSMC4 belongs to the heterohexameric ring of AAA (ATPases associated with diverse cellular activities) proteins. It unfolds ubiquitinated target proteins, simultaneously translocating them into a proteolytic chamber where they are degraded into peptides.
Gene References Into Functions
  1. Research has shown a specific distribution of HSC70 and PSMC4 in the cytoplasm, with accumulation within Lewy bodies in the dopaminergic neurons of the substantia nigra in Parkinson's disease patients. PMID: 29218503
  2. The structural mechanism for nucleotide-driven remodeling of RPT3 and its homologs in the activated human 26S proteasome has been elucidated. PMID: 29636472
  3. Site-specific phosphorylation of Rpt3 by DYRK2 has been shown to regulate cell proliferation and tumorigenesis in breast neoplasms. PMID: 26655835
  4. Saquinavir-NO has been demonstrated to inhibit activation of the S6 protein in androgen-dependent prostate cancer cells. PMID: 22370480
  5. The proposed TRAP1 network has been shown to be conserved in human colorectal cancers and regulated by ER-localized TRAP1 interacting with TBP7, providing a novel model of the ER-mitochondria crosstalk. PMID: 21979464
  6. The C terminus of Rpt3, an ATPase subunit of the PA700 (19S) regulatory complex, is essential for 26S proteasome assembly but not for activation. PMID: 20937828
  7. PSMC4 interacts with gankyrin through its C-terminal 78 amino acids. PMID: 11779854
  8. A novel specific interaction between synphilin-1 and the regulatory proteasomal protein S6 ATPase (tbp7) has been observed in aggresome-like intracytoplasmic inclusions. PMID: 17327361
  9. An insertion/deletion variant in intron 5 of the S6 ATPase gene has been found to be more frequent in German Parkinson's disease patients compared to controls. PMID: 18446261

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Database Links

HGNC: 9551

OMIM: 602707

KEGG: hsa:5704

STRING: 9606.ENSP00000157812

UniGene: Hs.211594

Protein Families
AAA ATPase family
Subcellular Location
Cytoplasm. Nucleus.

Q&A

What are the primary research applications for PSMC4 Antibody, HRP conjugated?

PSMC4 Antibody, HRP conjugated is primarily used in ELISA (Enzyme-Linked Immunosorbent Assay) applications for the detection of the 26S proteasome regulatory subunit 6B. The horseradish peroxidase (HRP) conjugation provides a direct detection method without requiring secondary antibodies, thereby streamlining experimental workflows and potentially reducing background signal. The antibody specifically targets amino acids 112-181 of the regulatory subunit 6B of PSMC4 . While the HRP-conjugated version is primarily recommended for ELISA, non-conjugated PSMC4 antibodies can also be used for Western Blot (WB), Immunohistochemistry (IHC), and Immunofluorescence (IF/ICC) applications with appropriate secondary antibodies and detection systems .

What is the species reactivity profile of PSMC4 Antibody, and how does this influence experimental design?

The species reactivity profile of PSMC4 antibodies varies between products. Based on the provided data, some PSMC4 antibodies demonstrate reactivity with human, mouse, and rat samples , while the HRP-conjugated version appears to be specifically tested for human reactivity . When designing experiments, researchers should carefully consider:

  • The target species in their experimental model

  • Validated reactivity data for the specific antibody

  • Potential cross-reactivity with other species not explicitly tested

  • Necessary positive and negative controls to validate reactivity in new experimental systems

For researchers working with non-human models, it is essential to verify species cross-reactivity before proceeding with full-scale experiments, as immunological epitopes can vary between species despite protein sequence conservation.

What are the recommended storage conditions for maintaining PSMC4 Antibody, HRP conjugated activity?

Proper storage is critical for maintaining antibody activity, particularly for conjugated antibodies. For PSMC4 Antibody, HRP conjugated, the following storage conditions are recommended:

  • Store at -20°C or -80°C upon receipt

  • Avoid repeated freeze-thaw cycles that can degrade both antibody structure and HRP enzymatic activity

  • For antibodies in glycerol buffer solutions (typically 50% glycerol), storage at -20°C is sufficient and prevents complete freezing

  • Working aliquots can be prepared to minimize freeze-thaw cycles

The antibody is typically supplied in a buffer containing preservatives (such as 0.03% Proclin 300) and stabilizers (such as 50% glycerol) in PBS at pH 7.4 . These components help maintain antibody stability during storage. Researchers should always check product-specific storage recommendations, as formulations can vary between manufacturers.

What are the optimal dilution factors for PSMC4 Antibody, HRP conjugated in different experimental applications?

Optimizing antibody dilution is crucial for balancing signal strength and specificity. For PSMC4 antibodies, the recommended dilutions vary by application:

ApplicationRecommended DilutionNotes
ELISA (HRP-conjugated)Not specifically stated, titration recommendedOptimization required for each experimental system
Western Blot (non-conjugated)1:500-1:2000Observed at 43-50 kDa molecular weight
Immunohistochemistry (non-conjugated)1:50-1:500Antigen retrieval with TE buffer pH 9.0 recommended
Immunofluorescence (non-conjugated)1:200-1:800Validated in SH-SY5Y and HepG2 cells

Importantly, these are starting recommendations, and researchers should perform titration experiments in their specific systems to determine optimal concentrations. For the HRP-conjugated antibody specifically, substrate selection and incubation times should also be optimized alongside antibody concentration.

How can researchers troubleshoot high background issues when using HRP-conjugated PSMC4 antibodies?

High background is a common challenge with HRP-conjugated antibodies. To troubleshoot this issue:

  • Optimize blocking conditions: Use 3-5% BSA or non-fat dry milk in TBS-T buffer for adequate blocking

  • Include additional washing steps: Increase the number and duration of washes with TBS-T to remove non-specifically bound antibody

  • Reduce antibody concentration: Perform a dilution series to determine the minimum antibody concentration that produces acceptable signal-to-noise ratio

  • Use additives in diluent buffer: Consider adding 0.1-0.5% Tween-20 or 1-5% normal serum from the same species as secondary antibody (when used)

  • Optimize substrate incubation time: For HRP-conjugated antibodies, shorter substrate incubation times may reduce background development

  • Consider sample preparation: Ensure complete lysis and removal of endogenous peroxidase activity in samples

Researchers should implement these modifications sequentially, testing one variable at a time to isolate the source of background.

What are the important considerations when designing negative controls for experiments using PSMC4 Antibody, HRP conjugated?

Proper negative controls are essential for validating experimental results. For PSMC4 Antibody, HRP conjugated experiments, consider:

  • Isotype control: Use a non-targeting IgG from the same host species (rabbit), with HRP conjugation, to control for non-specific binding

  • Blocking peptide control: Pre-incubate the antibody with a competing peptide containing the immunogen sequence (amino acids 112-181 of human 26S proteasome regulatory subunit 6B)

  • Knockout/knockdown validation: When available, use PSMC4 knockout or knockdown samples to confirm antibody specificity

  • Omission control: Perform parallel assays omitting the primary antibody to assess background from detection reagents

  • Cross-species reactivity control: When working with non-human samples, include human samples as positive controls given the validated human reactivity

These controls help distinguish between specific signal and experimental artifacts, enhancing result reliability and reproducibility.

How does the direct HRP conjugation of PSMC4 antibody compare methodologically with two-step detection systems?

The direct HRP conjugation offers distinct methodological advantages and limitations compared to two-step (primary + secondary) detection systems:

Advantages of HRP-conjugated PSMC4 antibody:

  • Reduced protocol time by eliminating secondary antibody incubation and washing steps

  • Minimized cross-reactivity issues that can arise from secondary antibodies

  • Potential for multiplexing with antibodies from the same host species

  • Enhanced signal reproducibility due to fixed enzyme:antibody ratio

Limitations compared to two-step systems:

  • Generally lower sensitivity due to lack of signal amplification (each primary antibody carries limited HRP molecules)

  • Less flexibility in detection method once conjugated

  • Potentially shorter shelf-life due to HRP activity degradation over time

  • May require higher antibody concentrations to achieve comparable signal

For researchers requiring ultimate sensitivity, the recombinant production of HRP-antibody conjugates can provide advantages over chemical conjugation methods, offering homogeneous preparations with defined stoichiometry and retained functional activity of both components .

What are the critical validation steps for confirming PSMC4 antibody specificity in new experimental systems?

When introducing PSMC4 antibody into new experimental systems, comprehensive validation is essential:

  • Western blot analysis: Confirm single band detection at the expected molecular weight (43-50 kDa)

  • Immunoprecipitation followed by mass spectrometry: Verify pulled-down proteins correspond to PSMC4

  • Peptide competition assay: Pre-incubate antibody with immunizing peptide to demonstrate signal reduction

  • Orthogonal antibody comparison: Test multiple antibodies targeting different PSMC4 epitopes to confirm consistent localization/detection

  • Genetic validation: Use CRISPR/siRNA knockdown or knockout models to demonstrate signal reduction

  • Cross-species evaluation: Compare detection patterns across species with known PSMC4 expression profiles

For immunohistochemistry applications specifically, researchers should consider:

  • Using multiple antigen retrieval methods (both TE buffer pH 9.0 and citrate buffer pH 6.0 have been effective)

  • Comparing staining patterns with published data in the Human Protein Atlas

  • Testing in both normal and diseased tissues (PSMC4 has been detected in human colon cancer tissue)

How can researchers optimize PSMC4 detection in complex proteasome studies?

The 26S proteasome is a complex multi-protein assembly where PSMC4 (regulatory subunit 6B) plays a key functional role. For optimizing detection in proteasome studies:

  • Native vs. denaturing conditions: Consider native PAGE for intact proteasome complexes versus SDS-PAGE for individual subunit detection

  • Co-immunoprecipitation strategies: Use PSMC4 antibodies to pull down intact proteasome complexes, followed by detection of other subunits

  • Subcellular fractionation: Implement nuclear/cytoplasmic fractionation to study proteasome distribution, as PSMC4 functions in both compartments

  • Activity-based probes: Combine PSMC4 immunodetection with proteasome activity assays using fluorescent substrates

  • Quantitative considerations: Implement absolute quantification methods (using recombinant standards) for accurate stoichiometry determination

For researchers studying ubiquitin-dependent protein degradation pathways, combining PSMC4 detection with ubiquitin immunoblotting can provide insights into substrate recognition and processing dynamics within the 26S proteasome complex.

What are the recommended approaches for multiplexing PSMC4 Antibody, HRP conjugated with other detection methods?

Multiplexing strategies allow simultaneous detection of multiple targets. For PSMC4 Antibody, HRP conjugated:

  • Sequential multiplex immunohistochemistry:

    • Perform HRP detection first, using aminoethylcarbazole (AEC) as substrate

    • Strip or quench HRP activity

    • Apply subsequent antibodies with different enzyme conjugates (e.g., alkaline phosphatase)

    • Develop with contrasting chromogens

  • Fluorescence multiplexing:

    • Convert HRP signal to fluorescence using tyramide signal amplification (TSA)

    • Choose fluorophores with non-overlapping spectra for multiple targets

    • Include appropriate controls for bleed-through and autofluorescence

  • Spatial separation strategy:

    • Use PSMC4 Antibody, HRP conjugated for ELISA or tissue sections

    • Apply differently labeled antibodies targeting other proteins

    • Analyze co-localization or distribution patterns

Each approach requires careful optimization of antibody concentrations, incubation times, and detection parameters to prevent cross-reactivity and signal interference.

What considerations should researchers take into account when using PSMC4 Antibody, HRP conjugated for quantitative analyses?

For quantitative applications with PSMC4 Antibody, HRP conjugated:

  • Standard curve generation:

    • Prepare standards using recombinant PSMC4 protein at known concentrations

    • Plot signal intensity versus concentration to establish linear detection range

    • Include standards on each experimental plate to account for inter-assay variation

  • Dynamic range optimization:

    • Determine upper and lower detection limits for your specific experimental system

    • Ensure samples fall within the linear portion of the standard curve

    • Dilute samples as needed to remain within quantifiable range

  • Data normalization strategies:

    • Normalize to total protein concentration determined by independent methods

    • Consider housekeeping proteins when comparing across different sample types

    • Account for potential variations in HRP activity between experiments

  • Technical replication:

    • Perform technical triplicates to assess method precision

    • Calculate coefficients of variation (CV) to monitor assay performance

    • Establish acceptance criteria for assay validation (typically CV < 15%)

These methodological considerations ensure reliable quantitative data generation when using HRP-conjugated antibodies for PSMC4 detection.

How does the recombinant production of HRP-antibody conjugates compare with traditional chemical conjugation methods?

Recent advances in recombinant technology offer alternative approaches to traditional chemical conjugation:

Recombinant production advantages:

  • Homogeneous preparation with defined stoichiometry (typically 1:1 ratio)

  • Retained functional activity of both HRP and antibody components

  • Site-specific conjugation avoiding interference with antigen-binding regions

  • Consistent lot-to-lot performance reducing experimental variability

  • Potential for genetic engineering to optimize conjugate properties

Traditional chemical conjugation limitations:

  • Heterogeneous mixture of conjugates with variable enzyme:antibody ratios

  • Potential interference with antigen-binding sites reducing affinity

  • Batch-to-batch variability requiring extensive validation

  • Limited control over conjugation sites

The Pichia pastoris methylotrophic yeast expression system has been successfully used for producing recombinant HRP-antibody conjugates, with functional preservation of both enzymatic and antigen-binding activity . Researchers interested in ultra-consistent PSMC4 detection might consider exploring recombinant conjugation approaches, particularly for quantitative applications requiring high reproducibility.

How might PSMC4 detection be incorporated into emerging proteasome-targeting therapeutic research?

As proteasome inhibitors continue to emerge as important therapeutic agents, PSMC4 detection offers several research opportunities:

  • Biomarker development:

    • Monitoring PSMC4 expression levels as potential predictive biomarkers for proteasome inhibitor response

    • Correlating PSMC4 post-translational modifications with treatment efficacy

    • Developing companion diagnostic approaches using HRP-conjugated antibodies

  • Drug discovery applications:

    • High-throughput screening assays using PSMC4 antibodies to identify compounds that modulate 26S proteasome activity

    • Structure-function studies investigating how specific inhibitors affect PSMC4's ATPase activity

    • Evaluation of resistance mechanisms through monitoring PSMC4 conformational changes

  • Mechanistic investigations:

    • Detailed analysis of PSMC4's role in ubiquitinated protein recognition

    • Investigation of PSMC4's interactions with other regulatory subunits during drug treatment

    • Temporal studies of proteasome adaptation to inhibition using PSMC4 as a marker

These research directions represent opportunities for applying PSMC4 antibodies beyond basic characterization into translational research contexts.

What methodological adaptations are needed when using PSMC4 Antibody, HRP conjugated in challenging sample types?

Different sample types present unique challenges for antibody-based detection:

  • Formalin-fixed paraffin-embedded (FFPE) tissues:

    • Optimize antigen retrieval conditions (both TE buffer pH 9.0 and citrate buffer pH 6.0 have been effective)

    • Consider extended primary antibody incubation times (overnight at 4°C)

    • Use tyramide signal amplification to enhance sensitivity in aged FFPE samples

  • Primary cell cultures and patient-derived samples:

    • Validate antibody performance in each new cell type

    • Account for potential variability in PSMC4 expression levels

    • Consider fixation optimization to preserve epitope recognition

  • Brain tissue samples:

    • PSMC4 antibody has been successfully tested in mouse and rat brain tissues

    • Address high lipid content that may interfere with antibody accessibility

    • Optimize permeabilization conditions while maintaining tissue morphology

  • Degraded or limited samples:

    • Implement signal amplification strategies for low-abundance detection

    • Consider carrier proteins to prevent non-specific antibody adsorption

    • Develop microfluidic approaches for minimal sample consumption

These methodological adaptations help extend PSMC4 detection capabilities across diverse experimental contexts and challenging sample types.

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