RBL5 Antibody

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Product Specs

Buffer
Preservative: 0.03% ProClin 300; Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
14-16 week lead time (made-to-order)
Synonyms
RBL5 antibody; At1g52580 antibody; F6D8.20 antibody; RHOMBOID-like protein 5 antibody; AtRBL5 antibody; EC 3.4.21.- antibody
Target Names
RBL5
Uniprot No.

Target Background

Function
This antibody targets a probable rhomboid-type serine protease. This protease is believed to catalyze intramembrane proteolysis and may play a role in reproductive organ maturation.
Database Links

KEGG: ath:AT1G52580

STRING: 3702.AT1G52580.1

UniGene: At.37569

Protein Families
Peptidase S54 family
Subcellular Location
Membrane; Multi-pass membrane protein.

Q&A

FAQs for Researchers on RH5 Antibody (Reticulocyte Binding Protein Homolog 5)
(Note: "RBL5" is likely a typographical error; the correct antigen designation in malaria research is RH5.)

What is the functional role of RH5 in Plasmodium falciparum erythrocyte invasion?

RH5 is essential for merozoite invasion of erythrocytes by binding basigin (CD147) on red blood cells. This interaction forms hydrogen bonds critical for invasion, as shown in cryo-EM structural studies . Methodological insights:

  • Experimental validation: Use in vitro erythrocyte invasion assays with RH5-specific monoclonal antibodies (mAbs) to quantify inhibition efficacy (e.g., 50% inhibitory concentration [IC50] values) .

  • Structural analysis: Cryo-EM mapping of RH5-CyRPA-RIPR complex interactions reveals binding interfaces .

How do RH5-specific antibodies neutralize malaria parasites?

Neutralization occurs via two mechanisms:

  • Blocking basigin binding: Antibodies targeting the RH5-basigin interface prevent erythrocyte attachment .

  • Disrupting complex stability: Antibodies binding adjacent regions (e.g., near CyRPA contact points) destabilize the RH5/CyRPA/RIPR pentameric complex .

Key data:

Antibody TargetNeutralization IC50 (µg/mL)Epitope RegionSource
Basigin interface0.02–0.15Site 1 (α-helix cluster)
CyRPA-proximal0.3–1.2Site 2 (β-sheet loop)

How can computational methods optimize RH5 antibody design for strain-transcending efficacy?

Methodology:

  • RosettaAntibodyDesign (RAbD): Graft CDR loops from canonical clusters to enhance affinity and specificity .

    • Benchmarking: Use design risk ratio (DRR >1.5) to prioritize CDR clusters with antigen-binding enrichment .

    • Case study: RAbD improved antibody affinity 10–50× in lambda/kappa antibody-antigen systems by modifying CDR-H3 length/cluster .

What explains the low natural prevalence of potent RH5-neutralizing antibodies in endemic populations?

Findings:

  • Low immunogenicity: Only 0.5–2% of isolated antibodies from naturally infected individuals show neutralizing activity .

  • Epitope focusing: Vaccine-induced antibodies target conserved basigin-binding epitopes more effectively than natural infection .

  • Evolutionary constraints: Balancing selection in RH5 (Tajima’s D = +2.1 in PNG populations) maintains polymorphisms near basigin interfaces, complicating antibody cross-reactivity .

How do RH5 antibody affinities correlate with in vivo protection?

Experimental framework:

  • Surface plasmon resonance (SPR): Measure binding kinetics (e.g., BB5.1 anti-C5 mAb: K<sub>D</sub> = 8.1 nM, k<sub>off</sub> = 0.0013 s<sup>−1</sup>) .

  • Functional assays: Correlate SPR data with in vitro inhibition (e.g., IC50) and in vivo parasite clearance rates in challenge models .

What are the challenges in translating RH5 antibodies to clinical use?

  • Genetic diversity: Papua New Guinea RH5 haplotypes show 44 variants, with 8 common SNPs (>1% frequency) at basigin-binding sites .

  • Antibody durability: Vaccine-induced anti-RH5 titers decline rapidly; natural infection elicits short-lived memory B cell responses .

  • Adjuvant selection: Use TLR-9 agonists (e.g., CpG) in preclinical models to enhance germinal center responses targeting conformational epitopes .

Methodological Recommendations

  • Epitope binning: Use competitive ELISA or BLI to classify antibodies by binding competition .

  • Structural validation: Combine hydrogen-deuterium exchange mass spectrometry (HDX-MS) with cryo-EM to resolve dynamic epitopes .

  • In silico maturation: Apply RAbD’s opt-dG protocol to optimize interface energy while preserving thermodynamic stability .

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