RBCS-3B Antibody

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Description

Anti-Band 3 Antibodies

PropertyDetailsSources
TargetBand 3 protein (anion exchanger 1, AE1)
RoleBinds clustered Band 3 on senescent/stressed RBCs, triggering clearance via complement or phagocytosis
Structural FeaturesRecognizes extracellular domains of Band 3 (≈100 kDa transmembrane glycoprotein)
Clinical RelevanceImplicated in autoimmune hemolytic anemia and thalassemia complications

Anti-KEL Antibodies

PropertyDetailsSources
TargetKEL glycoprotein (Kell blood group system)
Immune DynamicsExhibits enhanced IgM-to-IgG class switching in complement-deficient (C3 KO) models
PathogenicityMediates RBC clearance via Fcγ receptor engagement and complement activation

Anti-D (RhD) Antibodies

PropertyDetailsSources
TargetRhD antigen (non-glycosylated transmembrane protein)
Binding DynamicsForce spectroscopy reveals antigen density ≈2–182 molecules/µm² (non-uniform distribution)
ApplicationsCritical in hemolytic disease of the fetus/newborn (HDFN) diagnostics

Research Gaps and Recommendations

  1. Epitope Mapping: If "RBCS-3B" targets a novel RBC epitope, structural characterization via cryo-EM or AFM (as in ) would be necessary.

  2. Functional Assays: Evaluate complement fixation, opsonization efficiency, and Fc receptor binding using in vitro models (e.g., ).

  3. Cross-Reactivity Screening: Assess specificity against 300+ known RBC antigens to rule off-target effects ( ).

Product Specs

Buffer
Preservative: 0.03% ProClin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
14-16 Weeks (Made-to-Order)
Synonyms
RBCS-3B antibody; ATS3B antibody; At5g38410 antibody; MXI10.13 antibody; Ribulose bisphosphate carboxylase small chain 3B antibody; chloroplastic antibody; RuBisCO small subunit 3B antibody; EC 4.1.1.39 antibody
Target Names
RBCS-3B
Uniprot No.

Target Background

Function
RuBisCO is a critical enzyme catalyzing two competing reactions at the same active site: the carboxylation of D-ribulose 1,5-bisphosphate, essential for carbon dioxide fixation, and the oxidative fragmentation of the pentose substrate. While the small subunit lacks catalytic activity, it is indispensable for achieving maximal enzyme function.
Gene References Into Functions

RBCS Gene Function: Studies indicate that RBCS1A and RBCS3B genes additively contribute to Rubisco accumulation in Arabidopsis leaves, ensuring sufficient enzyme levels for optimal photosynthetic capacity. (PMID: 22223809)

Database Links

KEGG: ath:AT5G38410

STRING: 3702.AT5G38410.3

UniGene: At.20381

Protein Families
RuBisCO small chain family
Subcellular Location
Plastid, chloroplast.

Q&A

Basic Research Questions

How to validate antibody specificity for RBC surface antigens in flow cytometry experiments?

  • Method: Use dual-labeling with antigen-negative RBCs as controls. For HOD antigens, combine anti-HEL/IgG with Duffy-specific antibodies (e.g., MIMA-29) .

  • Key metrics:

    • ≥95% binding specificity to HOD RBCs vs <5% to wild-type RBCs .

    • Confirm absence of cross-reactivity with unrelated antigens (e.g., Ter-119) .

What parameters optimize antibody concentration for in vivo RBC studies?

  • Titration protocol:

    • Start with 0.1-10 μg/mL range

    • Measure binding kinetics at 5-min intervals for first hour

    • Use FcγR-deficient models to isolate binding effects

ParameterIn Vitro OptimalIn Vivo OptimalMeasurement Technique
Binding Saturation5 μg/mL2.5 μg/mLFlow cytometry
Equilibrium Time60 min45 minRadiolabeled antibody tracking

Advanced Research Challenges

How to resolve contradictions in antibody-mediated immunosuppression (AMIS) mechanisms?

  • Conflict: Some studies report AMIS requires antigen modulation , while others show FcγR-independent suppression .

  • Resolution framework:

    • Compare antibody isotypes (IgG1 vs IgG2a)

    • Quantify antigen density pre/post exposure (threshold: <200 antigens/RBC = modulation)

    • Use HOD RBCs with locked antigen expression

What methods analyze antibody binding dynamics on circulating RBCs?

  • In vivo protocol:

    • Inject eFluor670-labeled antibodies

    • Perform serial blood sampling at:

      • 5, 15, 30, 60, 120 mins

    • Calculate on/off rates using modified Langmuir model:
      konin vivo=1.8×104 M1s1k_{on}^{in\ vivo} = 1.8 \times 10^4\ M^{-1}s^{-1} vs konin vitro=9.2×103 M1s1k_{on}^{in\ vitro} = 9.2 \times 10^3\ M^{-1}s^{-1}

How to differentiate steric hindrance from antigen loss in AMIS?

  • Experimental design:

ApproachAntigen ModulationSteric HindranceKey Assay
Proteinase K digestionYesNoWestern blot
Competitive ELISANoYesIC50 shift analysis
Atomic force microscopyQuantitativeSpatial mappingForce-curve analysis

Methodological Considerations

What controls are essential for longitudinal RBC antibody studies?

  • Required controls:

    • FcγR-blocked cohorts

    • Isotype-matched non-specific antibodies

    • Daily osmotic fragility testing

    • Hemichrome quantification (threshold: >0.5% = oxidative stress)

How to address antibody-induced antigen clustering artifacts?

  • Mitigation strategies:

    • Use Src kinase inhibitors to prevent phosphorylation-induced clustering

    • Validate with AFM force mapping (11.2 ± 3.4 pN vs 23.8 ± 5.6 pN cluster forces)

    • Compare static vs flow conditions (shear stress ≥2 dyn/cm²)

What statistical approaches handle RBC population heterogeneity?

  • Recommended methods:

    • Finite mixture modeling for antigen density distributions

    • Survival analysis for clearance kinetics (Weibull distribution preferred)

    • Bootstrap resampling for small sample sizes (n<10)

Key Technical Insights from Recent Studies

  • Antibody binding shows accelerated in vivo association kinetics (2.6-fold faster than in vitro)

  • Persistent antigen-antibody complexes have half-life >48 hrs despite rapid plasma clearance

  • Threshold phenomenon: AMIS occurs only when >85% of target epitopes are occupied

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