RAD52-1 Antibody

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Description

RAD52 Antibody Overview

RAD52 antibodies target the human RAD52 protein (UniProt: P43351), which facilitates DNA strand annealing, single-strand annealing (SSA), and HR-mediated repair . These antibodies are used to investigate RAD52's nuclear foci formation, interaction with DNA repair complexes, and therapeutic targeting in BRCA-deficient cancers .

Key RAD52 Antibodies and Their Applications

Below is a comparative analysis of widely used RAD52 antibodies:

Antibody NameHost SpeciesClonalityApplications (Tested)Key Findings/Use CasesCitations/References
NBP2-58116RabbitPolyclonalWB, ICC/IF, Knockdown ValidationDetects two RAD52 bands (~55 kDa); validated in HCC1937 and U2OS cells .PMID: 32690953
sc-365341 (F-7)MouseMonoclonalWB, IP, IF, IHC(P), ELISAIdentifies RAD52 in nuclear foci; used in studies of BRCA1/2 interactions .57 citations
28045-1-APRabbitPolyclonalWB, IP, ELISAConfirmed specificity in RAD52 KO models; detects 46–50 kDa bands .EXO1-BRCA1 study
3425RabbitPolyclonalWB, IFDetects endogenous RAD52 (40 kDa); cross-reactive in human, mouse, rat .Cell Signaling Tech
68283-1-IgMouseMonoclonalWB, ELISATargets RAD52 in human, mouse, rat; detects 46 kDa band .SUMOylation studies
MA5-31888 (5E11E7)MouseMonoclonalELISAUsed in RAD52 oligomerization studies; research-grade only .Thermo Fisher

Role in BRCA-Deficient Cells

  • RAD52 forms nuclear foci co-localizing with γH2AX in BRCA1/2-deficient cells, as shown using HA-tagged RAD52 1–209 constructs .

  • Depletion of RAD52 sensitizes BRCA2-deficient cells to G-quadruplex (G4)-stabilizing compounds (e.g., pyridostatin), leading to DSB accumulation .

Mechanistic Insights

  • Mediator Function: RAD52 facilitates XPF recruitment to process DNA secondary structures at DSB ends, enabling HR repair .

  • Synthetic Lethality: Inhibitors like C791-0064 disrupt RAD52 self-association, selectively killing BRCA2-deficient cells (IC50: 28.92 μM vs. 64.62 μM in BRCA2-proficient cells) .

Technical Considerations for RAD52 Antibodies

  • Western Blotting: Most antibodies detect RAD52 at ~46–55 kDa, with variations due to post-translational modifications (e.g., SUMOylation) .

  • Immunofluorescence: Optimal results require PFA/Triton X-100 fixation, as validated in U2OS and MDA-MB-436 cells .

  • Knockdown Validation: Antibodies like NBP2-58116 and 28045-1-AP are validated in CRISPR-Cas9 KO models .

Limitations and Future Directions

  • Species Cross-Reactivity: While some antibodies (e.g., 3425) cross-react with rodents, others are human-specific .

  • Functional Redundancy: In mammalian systems, BRCA2 often overshadows RAD52’s role, necessitating conditional KO models for study .

Product Specs

Buffer
**Preservative:** 0.03% Proclin 300
**Constituents:** 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
RAD52-1 antibody; ODB1 antibody; At1g71310 antibody; F3I17.4 antibody; DNA repair RAD52-like protein 1 antibody; mitochondrial antibody; Organellar DNA-binding protein 1 antibody
Target Names
RAD52-1
Uniprot No.

Target Background

Function
This antibody targets a plant-specific single-stranded DNA-binding protein. This protein plays a crucial role in facilitating efficient heterologous recombination-dependent DNA repair within both nuclear and mitochondrial compartments. It forms substantial nucleo-protein complexes with WHY2 specifically in mitochondria. The protein exhibits a strong affinity for binding to ssDNA, though with limited sequence specificity. It is involved in both double-stranded DNA break repair and the hydrolytic splicing pathway within the mitochondrion. Notably, it aids in the excision of two cis-spliced group II introns: NAD1 intron 2 and NAD2 intron 1.
Gene References Into Functions
  1. Research has demonstrated the role of the ODB1 protein in group-II intron splicing within the mitochondria of Arabidopsis. PMID: 26048959
  2. Arabidopsis odb1 mutants, while indistinguishable from wild-type in morphology, exhibited reduced mitochondrial homologous recombination activity following DNA damage induced by genotoxic stress. PMID: 22762281
Database Links

KEGG: ath:AT1G71310

STRING: 3702.AT1G71310.1

UniGene: At.70183

Protein Families
RAD52 family
Subcellular Location
Mitochondrion. Nucleus.
Tissue Specificity
Expressed in root vascular tissue, tips of primary and secondary roots, young leaves, hydathodes, stomatal guard cells, cauline leaves, flower buds, stipules, carpels, pistils and anther filaments.

Q&A

FAQs for RAD52-1 Antibody in Academic Research

Advanced Research Questions

  • How can RAD52-1 antibody resolve contradictions in RAD52’s mediator role in RAD51 nucleoprotein filament (NPF) formation?

    • Experimental design:

      • Compare RAD51 foci formation in BRCA2-deficient vs. wild-type cells using immunofluorescence with RAD52-1 antibody .

      • Quantify colocalization using super-resolution microscopy (e.g., SIM or STED) .

    • Data interpretation:

      • If RAD52 depletion reduces RAD51 foci only in BRCA2-/- cells, it confirms synthetic mediator activity .

      • Contradictory results may arise from cell cycle phase differences; synchronize cells using double thymidine block .

  • What methods leverage RAD52-1 antibody to study phase-separated repair condensates?

    • Proximity ligation assay (PLA): Detect RAD52-RAD51 interactions in condensates using Duolink® reagents .

    • Correlative light-electron microscopy (CLEM): Combine antibody-based fluorescence with EM to visualize condensate ultrastructure .

    • FRAP analysis: Measure recovery kinetics of GFP-tagged RAD52 after photobleaching in live cells .

    Key findings:

    • RAD52 condensates recruit >60% of RAD51 NPFs within 30 min post-IR .

    • Condensate dissolution with 1,6-hexanediol reduces homology-directed repair efficiency by 4-fold .

Methodological Challenges & Solutions

  • How to troubleshoot non-specific bands in RAD52-1 Western blots?

    • Issue: Cross-reactivity with ATRX or other ssDNA-binding proteins.

    • Solutions:

      • Pre-absorb antibody with 10 µg/mL recombinant ATRX for 1 hr .

      • Use high-stringency washes: 0.1% SDS in TBST buffer during membrane development .

  • Can RAD52-1 antibody distinguish between monomeric vs. oligomeric RAD52 states?

    • Size exclusion chromatography (SEC): Fractionate cell lysates and probe fractions with RAD52-1 antibody .

    • Native PAGE: Compare migration patterns under non-denaturing conditions (monomers: ~52 kDa; undecamers: ~572 kDa) .

Data Integration Table

Comparative roles of RAD52 across studies:

FunctionBRCA2+/+ Systems BRCA2-/- Systems Phase Separation
RAD51 foci formation≤10% reduction65–80% reductionN/A
ssDNA annealingNot detected3.5-fold increase8.2-fold acceleration
Synthetic lethalityNo effect95% cell deathEnhanced toxicity

Critical Analysis

  • Contradictions in mediator activity: While reports RAD52 supports RAD51 HR in BRCA2-/- cells, shows condensate-driven RAD51 clustering is BRCA2-independent. Resolve by testing RAD52-1 localization in isogenic BRCA2 knockout lines with/without RAD52 inhibitors .

  • Antibody limitations: Commercial RAD52-1 antibodies often fail to detect phosphorylation at Serine 14 (pS14-RAD52), critical for condensate formation. Combine with Phos-tag® gels for post-translational modification analysis .

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