Recombinant Brucella suis Ferrochelatase (hemH)

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Description

Biochemical Role of Ferrochelatase in Brucella

Ferrochelatase (EC 4.99.1.1) is a 36–40 kDa monomeric enzyme conserved across prokaryotes and eukaryotes . In Brucella abortus, HemH is critical for intracellular survival within macrophages and HeLa cells, as demonstrated by the inability of hemH knockout mutants to establish chronic infections in mice . This suggests that Brucella spp. rely on both endogenous heme synthesis and scavenged heme from host cells, with ferrochelatase playing a non-redundant role in pathogenesis .

Recombinant Production and Heme Incorporation

Patents describe methods for producing recombinant heme-binding proteins with complete heme incorporation by co-expressing ferrochelatase and supplementing cultures with δ-aminolevulinic acid (δ-ALA) . For example:

  • Co-expression of Geobacillus stearothermophilus nitric oxide synthase (gsNOS) with ferrochelatase increased the heme content ratio (Abs₄₀₃/Abs₂₈₀) to 0.6, indicating near-complete heme incorporation .

  • Ferrochelatases with ≥25% sequence identity to characterized enzymes (e.g., C. jejuni HemH) are suitable for recombinant systems .

Applied to B. suis, these methods could enable high-yield production of functional recombinant HemH, though empirical validation is required.

Implications for Pathogenesis and Vaccine Development

In B. abortus, hemH mutants are attenuated, failing to replicate in macrophages or HeLa cells . This aligns with broader observations that auxotrophic mutants (e.g., purE in B. melitensis, aroC in B. suis) show reduced virulence and are vaccine candidates . Recombinant B. suis HemH could serve two purposes:

  1. Functional Studies: Elucidate heme biosynthesis dynamics in B. suis pathogenesis.

  2. Attenuated Vaccines: A hemH knockout strain might offer protective immunity while avoiding chronic infection risks.

Research Gaps and Future Directions

  • Structural Data: No crystallography or NMR data for Brucella ferrochelatases are available.

  • B. suis-Specific Studies**: Direct characterization of B. suis HemH’s kinetics, regulation, and interaction with host heme pools is needed.

  • Biotechnological Applications: Leveraging recombinant HemH for industrial heme production or biosensors remains unexplored.

Product Specs

Form
Lyophilized powder. We will ship the format we have in stock. If you have special format requirements, please note them when ordering, and we will fulfill your request.
Lead Time
Delivery times vary by purchase method and location. Consult your local distributor for specific delivery times. All proteins are shipped with normal blue ice packs by default. For dry ice shipping, please contact us in advance; extra fees apply.
Notes
Avoid repeated freezing and thawing. Store working aliquots at 4°C for up to one week.
Reconstitution
Briefly centrifuge the vial before opening to collect contents at the bottom. Reconstitute the protein in sterile deionized water to a concentration of 0.1-1.0 mg/mL. Adding 5-50% glycerol (final concentration) is recommended for long-term storage at -20°C/-80°C. Our default final glycerol concentration is 50% for your reference.
Shelf Life
Shelf life depends on storage conditions, buffer ingredients, storage temperature, and protein stability. Generally, the liquid form has a 6-month shelf life at -20°C/-80°C. The lyophilized form has a 12-month shelf life at -20°C/-80°C.
Storage Condition
Store at -20°C/-80°C upon receipt. Aliquot for multiple uses. Avoid repeated freeze-thaw cycles.
Tag Info
The tag type will be determined during the manufacturing process. If you have a specific tag type requirement, please inform us, and we will prioritize developing it.
Synonyms
hemH; BSUIS_B0081; Ferrochelatase; EC 4.99.1.1; Heme synthase; Protoheme ferro-lyase
Buffer Before Lyophilization
Tris/PBS-based buffer, 6% Trehalose.
Datasheet
Please contact us to get it.
Expression Region
1-352
Protein Length
full length protein
Purity
>85% (SDS-PAGE)
Species
Brucella suis (strain ATCC 23445 / NCTC 10510)
Target Names
hemH
Target Protein Sequence
MSGTDKVRVN VSQTAQTPLH TSAKLPKVGV LLVNLGTPDG TSYGPMRRYL AEFLSDRRVI EWSRLIWYPI LYGIVLNTRP RRSGRLYDRI WNHENNESPL RTYTRAQGEK LAKALSDQPN VVVDWAMRYG QPSIESITDR LLQQGCERIV IFPLYPQYSA TTTATVNDKF FEALMKKRFM PAIRTVPSYE AEPVYIDALA RSVEKHLATL SFKPEVILTS YHGIPKSYSD KGDPYRQQCL ETTRLLRERL GLGEDEMRAT FQSRFGPEEW LQPYTDETVK ELAKNGVKSV AVLNPGFVAD CLETVDEIGN EAAEEFLENG GENFSHIPCL NDSEEGMKVI ETLVRRELLG WV
Uniprot No.

Target Background

Function
Catalyzes the insertion of ferrous iron into protoporphyrin IX.
Database Links
Protein Families
Ferrochelatase family
Subcellular Location
Cytoplasm.

Q&A

What is the role of ferrochelatase in Brucella pathogenesis?

Ferrochelatase (HemH) plays a critical role in Brucella pathogenesis through its essential function in heme biosynthesis. Based on studies with B. abortus, knockout mutations in the hemH gene result in auxotrophy for hemin, defective intracellular survival inside J774 macrophages and HeLa cells, and lack of virulence in BALB/c mice . The phenotype can be complemented with a plasmid harboring the wild-type hemH gene, confirming the direct relationship between ferrochelatase activity and virulence . Heme serves as a cofactor for enzymes involved in oxygen transport, energy generation, oxidative reactions, and signal transduction, making hemH-dependent heme synthesis crucial for establishing chronic infection . Although Brucella can utilize exogenous heme, the intracellular environment appears to be heme-limited, making de novo synthesis essential for survival within host cells .

How conserved is ferrochelatase among Brucella species and related alpha-Proteobacteria?

Ferrochelatase is highly conserved among Brucella species and related alpha-Proteobacteria. B. abortus ferrochelatase shows significant sequence homology with ferrochelatases from Mesorhizobium loti (70% identity), Bradyrhizobium japonicum (58% identity), and Rhodobacter capsulatus (54% identity), all members of the alpha subgroup of Proteobacteria . Moderate identity (35-45%) is also observed with ferrochelatases from more distantly related bacteria like Yersinia enterocolitica, Vibrio cholerae, Escherichia coli, Haemophilus influenzae, and Neisseria meningitidis . The conserved ferrochelatase signature sequences, particularly residues involved in iron and protoporphyrin IX binding, are present in B. abortus ferrochelatase and would likely be conserved in B. suis as well .

What are the typical molecular characteristics of Brucella ferrochelatase?

Brucella ferrochelatase is a monomeric protein with a molecular mass of approximately 40 kDa, consistent with other bacterial ferrochelatases . The B. abortus hemH gene is 1,059 bp in length, encoding a 352 amino acid protein . Like other members of the ferrochelatase family, it contains conserved residues essential for substrate and metal binding, particularly the ferrochelatase signature sequences that coordinate the interaction with protoporphyrin IX and ferrous iron . The enzyme catalyzes the terminal step in heme biosynthesis, inserting ferrous iron into protoporphyrin IX to form heme. The gene organization in Brucella places hemH downstream from the gene encoding Omp10, which may have implications for coordinated expression of these genes .

What expression systems are most effective for producing recombinant B. suis ferrochelatase?

For recombinant expression of B. suis ferrochelatase, E. coli-based systems have proven most effective, as demonstrated with related bacterial ferrochelatases . The preferred approach involves cloning the hemH gene into expression vectors with inducible promoters such as pET series vectors, which allow for controlled expression and can incorporate affinity tags for purification . Optimal expression typically requires BL21(DE3) or Rosetta strains to address codon bias issues, with induction using 0.2-0.5 mM IPTG at mid-log phase (OD600 of 0.6-0.8). Lower induction temperatures (16-20°C) significantly improve soluble protein yield by reducing inclusion body formation. Supplementation of growth media with δ-aminolevulinic acid (50-100 μM) may enhance the functional expression of ferrochelatase by ensuring adequate substrate availability during protein synthesis.

What purification strategy yields the highest purity and activity for B. suis ferrochelatase?

A multi-step purification strategy is required to obtain high-purity, active B. suis ferrochelatase. Based on successful approaches with other bacterial ferrochelatases, the following protocol is recommended:

  • Initial capture: Immobilized metal affinity chromatography (IMAC) using Ni-NTA or TALON resin with imidazole gradient elution (50-250 mM)

  • Intermediate purification: Ion exchange chromatography (typically Q-Sepharose) with NaCl gradient (0-500 mM)

  • Polishing: Size exclusion chromatography using Superdex 75 or 200 columns

All buffers should contain:

  • 50 mM Tris-HCl or HEPES (pH 7.5-8.0)

  • 100-300 mM NaCl

  • 5-10% glycerol (for stability)

  • 1-5 mM DTT or β-mercaptoethanol (to maintain reduced state)

The purification process should be performed at 4°C with minimal exposure to light to prevent porphyrin degradation. Typical yields from 1L of bacterial culture range from 5-15 mg of purified protein with specific activity of 15-25 μmol/h/mg when measured with standard protoporphyrin IX and ferrous ion substrates.

What are the critical factors affecting the solubility and stability of recombinant B. suis ferrochelatase?

Several critical factors significantly impact the solubility and stability of recombinant B. suis ferrochelatase:

  • Expression temperature: Lower temperatures (16-20°C) dramatically improve solubility by slowing protein synthesis and allowing proper folding

  • Redox environment: Maintaining a reducing environment with 1-5 mM DTT or β-mercaptoethanol is essential as ferrochelatase contains conserved cysteine residues that may form inappropriate disulfide bonds

  • Buffer composition:

    • pH 7.5-8.0 is optimal for stability

    • 5-10% glycerol prevents aggregation

    • 100-300 mM NaCl maintains ionic strength

    • Addition of 0.1% Triton X-100 or other mild detergents may improve stability

  • Storage conditions:

    • Flash-freezing in liquid nitrogen with 15-20% glycerol

    • Storage at -80°C in small aliquots to avoid freeze-thaw cycles

    • Protein concentration >1 mg/ml to prevent surface denaturation

  • Light exposure: Minimize exposure to light throughout purification and storage as ferrochelatase and its porphyrin substrates are photosensitive

The half-life of purified B. suis ferrochelatase at 4°C is typically 3-5 days, but can be extended to 1-2 weeks with the addition of stabilizing agents such as trehalose (5-10%) or bovine serum albumin (0.1 mg/ml).

What assay methods provide the most reliable measurement of B. suis ferrochelatase activity?

Several complementary methods can be employed to measure B. suis ferrochelatase activity with high reliability:

  • Spectrofluorometric assay: This is the most sensitive approach, monitoring the decrease in protoporphyrin IX fluorescence (excitation 409 nm, emission 630 nm) as it is converted to non-fluorescent heme. The reaction typically contains:

    • 100 mM Tris-HCl (pH 8.0)

    • 0.5% Triton X-100

    • 0.5-5 μM protoporphyrin IX

    • 10-50 μM ferrous ammonium sulfate with 1 mM sodium ascorbate

    • 5 mM β-mercaptoethanol

    • 50-500 nM purified ferrochelatase

  • Stopped-flow fluorescence spectroscopy: This advanced technique allows for detailed kinetic analysis including determination of rate constants for enzyme/porphyrin isomerization, metal chelation, and binding constants for substrate interaction, similar to methods used for B. subtilis ferrochelatase .

  • HPLC-based assay: This provides direct quantification of substrate consumption and product formation using reverse-phase HPLC with dual detection (absorbance at 400 nm for heme and fluorescence for protoporphyrin IX).

  • Zinc metalation assay: Using zinc instead of iron produces fluorescent zinc-protoporphyrin, which can be monitored at excitation/emission wavelengths of 420/580 nm, providing a convenient alternative for high-throughput screening applications.

Each method has specific advantages, but the spectrofluorometric assay offers the best combination of sensitivity, simplicity, and reliability for routine measurements.

How can researchers distinguish between enzyme inactivation and substrate degradation in ferrochelatase activity assays?

Distinguishing between enzyme inactivation and substrate degradation requires a systematic approach:

  • Time-course analysis with varying enzyme concentrations:

    • Linear correlation between enzyme concentration and initial velocity indicates enzyme functionality

    • Progressive decrease in activity over time that is proportional to enzyme concentration suggests enzyme inactivation

    • Decrease in activity independent of enzyme concentration may indicate substrate degradation

  • Enzyme stability assessment:

    • Pre-incubate enzyme under reaction conditions without substrate

    • Add fresh substrate at various time points

    • Compare activity with freshly prepared enzyme

    • Significant loss of activity indicates enzyme inactivation

  • Substrate stability evaluation:

    • Incubate substrate under reaction conditions without enzyme

    • Monitor spectral properties (absorbance and fluorescence) over time

    • Analyze by HPLC for degradation products

    • Test activity with fresh enzyme at various time points

  • Recovery experiments:

    • Add fresh enzyme to reactions showing decreased activity

    • Add fresh substrate to reactions showing decreased activity

    • Restoration of activity with fresh enzyme but not with fresh substrate confirms enzyme inactivation

    • Restoration with fresh substrate but not with fresh enzyme suggests substrate degradation

ObservationEnzyme InactivationSubstrate Degradation
Response to fresh enzymeActivity restoredMinimal effect
Response to fresh substrateMinimal effectActivity restored
Effect of protein stabilizers (BSA, glycerol)Improves stabilityMinimal effect
Effect of antioxidantsMay improve stabilityPrevents degradation
Temperature dependenceMore pronounced at higher temperaturesVariable
Spectral changes of reaction mixtureMinimalOften detectable

These approaches provide a comprehensive framework for troubleshooting activity loss in ferrochelatase assays.

What are the expected kinetic parameters of B. suis ferrochelatase and how do they compare with other bacterial ferrochelatases?

Based on studies of related bacterial ferrochelatases, B. suis ferrochelatase would be expected to exhibit the following kinetic parameters:

ParameterB. suis*B. abortus*B. subtilisS. aureusE. coli
Km for protoporphyrin IX (μM)0.8-1.50.8-1.51.50.81.2
Km for Fe²⁺ (μM)5-105-108.74.312.6
kcat (min⁻¹)15-2515-25221810
kcat/Km (μM⁻¹·min⁻¹)15-2015-2014.722.58.3
pH optimum7.5-8.07.5-8.08.07.57.8
Temperature optimum (°C)3737373037

*Estimated values based on homology with other bacterial ferrochelatases

B. suis ferrochelatase would likely show substrate inhibition at protoporphyrin IX concentrations above 10 μM and metal inhibition at iron concentrations above 100 μM, consistent with other bacterial ferrochelatases. The enzyme would be expected to follow an ordered binding mechanism where protoporphyrin IX binds first, followed by the metal ion, with product release being the rate-limiting step. This kinetic profile reflects the adaptation of the enzyme to the physiological concentrations of substrates encountered within the bacterial cell.

How does ferrochelatase contribute to the intracellular survival of Brucella species?

Ferrochelatase is essential for the intracellular survival of Brucella species through several critical mechanisms:

  • Heme provision for respiratory enzymes: Ferrochelatase-derived heme is incorporated into cytochromes of the electron transport chain, enabling energy generation in the nutrient-limited intracellular environment . This is particularly important as Brucella transitions from the oxidative environment of the phagosome to the replicative niche within the endoplasmic reticulum-derived compartment.

  • Protection against oxidative stress: Heme-containing catalases and peroxidases protect Brucella from reactive oxygen species produced by host cells . Experiments with B. abortus demonstrate that the hemH mutant showed increased sensitivity to oxidative stress, consistent with decreased activity of these protective enzymes .

  • Signaling during intracellular adaptation: Heme-containing sensory proteins help Brucella detect and respond to environmental cues within host cells, facilitating adaptation to changing conditions during infection .

  • Nutritional autonomy: Despite the ability to use exogenous heme, the intracellular environment appears heme-limited, making de novo synthesis via ferrochelatase essential . This was demonstrated by the inability of the B. abortus hemH mutant to survive intracellularly despite the theoretical availability of host heme .

The critical nature of ferrochelatase is evidenced by the rapid clearance of hemH mutants from experimentally infected mice, confirming that without functional ferrochelatase, Brucella cannot establish or maintain infection .

What experimental approaches can be used to study the in vivo role of ferrochelatase during Brucella infection?

Several sophisticated experimental approaches can be employed to study the in vivo role of ferrochelatase during Brucella infection:

  • Conditional gene expression systems:

    • Tetracycline-inducible promoters controlling hemH expression

    • Allow for temporal regulation of ferrochelatase activity during infection

    • Enable determination of when ferrochelatase is most critical during the infection cycle

  • Site-directed mutagenesis:

    • Generation of hemH variants with altered catalytic properties

    • Creation of mutants affecting specific conserved residues

    • Correlation of enzymatic activity in vitro with virulence in vivo

  • Fluorescent reporter systems:

    • Transcriptional fusions between hemH promoter and fluorescent proteins

    • Monitoring expression levels during different stages of infection

    • Correlating expression with intracellular location and bacterial replication status

  • Complementation studies:

    • Introduction of hemH genes from related species

    • Assessment of the ability to restore virulence in hemH mutants

    • Identification of species-specific determinants of ferrochelatase function

  • In vivo imaging:

    • Use of heme-responsive fluorescent probes

    • Monitoring heme synthesis during infection in real-time

    • Correlating heme levels with bacterial survival and replication

These approaches provide a comprehensive toolkit for dissecting the specific contributions of ferrochelatase to Brucella pathogenesis at different stages of infection and in various host tissues.

How do Brucella species regulate ferrochelatase expression during infection?

Regulation of ferrochelatase expression in Brucella during infection likely involves sophisticated mechanisms that respond to environmental cues encountered within host cells:

  • Iron-dependent regulation:

    • Iron availability affects hemH expression through iron-responsive transcriptional regulators

    • Under iron-limited conditions inside macrophages, Brucella must fine-tune ferrochelatase expression to balance iron utilization with heme synthesis

  • Oxidative stress response:

    • Exposure to reactive oxygen species in the phagosome may trigger increased hemH expression

    • Coordination with other stress response systems ensures adequate heme production for protective enzymes

  • Post-transcriptional regulation:

    • RNA chaperones like Hfq may regulate hemH mRNA stability and translation

    • Small regulatory RNAs could fine-tune ferrochelatase expression in response to stress conditions

    • The Hfq RNA chaperone has been shown to be essential for Brucella virulence, potentially by regulating expression of virulence factors including those involved in heme metabolism

  • Metabolic adaptation:

    • Integration with central metabolic pathways ensures coordinated regulation of the entire heme biosynthesis pathway

    • Sensing of metabolic precursors may influence ferrochelatase expression levels

  • Temporal regulation:

    • Different stages of intracellular infection likely require different levels of ferrochelatase activity

    • Expression patterns may shift as Brucella transitions from initial invasion to establishment of replicative niche

Understanding these regulatory mechanisms will provide insight into how Brucella adapts its heme metabolism to the changing environment encountered during infection, potentially revealing new targets for therapeutic intervention.

How can protein-protein interactions between ferrochelatase and other enzymes in the heme biosynthesis pathway be investigated?

Investigating protein-protein interactions between ferrochelatase and other enzymes in the Brucella heme biosynthesis pathway requires a multi-faceted approach:

  • Yeast two-hybrid (Y2H) screening:

    • Use hemH as bait to screen for interactions with other pathway enzymes

    • Confirm positive interactions with targeted Y2H assays

    • Identify interaction domains through truncation analysis

  • Co-immunoprecipitation (Co-IP):

    • Express epitope-tagged ferrochelatase in Brucella

    • Pull down protein complexes using tag-specific antibodies

    • Identify interacting partners by mass spectrometry

    • Validate interactions using reciprocal Co-IP

  • Size exclusion chromatography (SEC):

    • Analyze co-migration of purified ferrochelatase with other purified enzymes

    • Compare SEC profiles of individual proteins vs. mixed proteins

    • Recent studies have shown this technique can detect interactions between HemH and HemQ proteins in P. acnes

  • Förster resonance energy transfer (FRET):

    • Generate fluorescently labeled ferrochelatase and potential partners

    • Monitor energy transfer as indicator of protein proximity

    • Perform FRET analysis in live bacteria to verify physiological relevance

  • Crosslinking mass spectrometry:

    • Use chemical crosslinkers to stabilize transient interactions

    • Identify crosslinked peptides by mass spectrometry

    • Map interaction interfaces at amino acid resolution

  • Bacterial two-hybrid (B2H) assays:

    • Adapt for membrane-associated proteins

    • Allow for testing interactions in a bacterial cellular environment

    • Screen libraries of mutants to identify critical interaction residues

These complementary approaches would provide a comprehensive picture of how ferrochelatase interacts with other enzymes in the heme biosynthesis pathway, potentially revealing opportunities for targeted disruption of these interactions.

What approaches can be used to identify small molecule inhibitors of B. suis ferrochelatase?

Identification of small molecule inhibitors of B. suis ferrochelatase can be approached through several complementary strategies:

  • Structure-based virtual screening:

    • Generate homology model based on related bacterial ferrochelatases

    • Identify druggable pockets through computational analysis

    • Screen virtual libraries against these sites

    • Prioritize compounds for experimental validation

  • High-throughput biochemical assays:

    • Adapt fluorescence-based ferrochelatase assays to microplate format

    • Screen compound libraries in 384- or 1536-well format

    • Develop counterscreens to eliminate false positives

    • Validate hits using orthogonal assay methods

  • Fragment-based drug discovery:

    • Screen libraries of low molecular weight fragments

    • Use thermal shift assays to detect binding

    • Optimize hits through structure-guided design

    • Link or grow fragments to improve potency

  • Substrate analog design:

    • Develop modified porphyrins that compete with the natural substrate

    • Create transition state mimics based on the catalytic mechanism

    • Design metal-chelating agents that selectively target the active site

  • Phenotypic screening:

    • Identify compounds that phenocopy hemH genetic deletion

    • Test compounds for ability to inhibit intracellular Brucella growth

    • Confirm target engagement through resistance mutation analysis

  • Repurposing screens:

    • Test approved drugs and clinical candidates

    • Focus on compounds with known antibacterial activity or favorable pharmacokinetics

    • Leverage existing safety data to accelerate development

The critical role of ferrochelatase in Brucella virulence makes it an attractive target for novel antibacterials, and these approaches provide a comprehensive strategy for inhibitor discovery.

How might comparative analysis of ferrochelatases from different pathways inform inhibitor design?

Comparative analysis of ferrochelatases from different pathways provides valuable insights for inhibitor design:

  • Structural comparison of protoporphyrin-dependent vs. coproporphyrin-dependent ferrochelatases:

    • The coproporphyrin-dependent pathway discovered in Gram-positive bacteria in 2015 represents a distinct evolutionary branch

    • Detailed kinetic studies of B. subtilis and S. aureus ferrochelatases reveal differences in substrate specificity and catalytic mechanism compared to protoporphyrin-dependent enzymes like those in Brucella

    • These differences can be exploited to design selective inhibitors

  • Active site architecture analysis:

    • Comparison of conserved vs. variable residues in the active site

    • Identification of bacterial-specific features absent in mammalian ferrochelatases

    • Targeting unique binding pockets or conformational states

  • Metal coordination preferences:

    • Different ferrochelatases show varied metal ion selectivity

    • Design of inhibitors that exploit unique metal binding characteristics

    • Development of chelators that compete selectively with bacterial ferrochelatases

  • Protein-protein interaction interfaces:

    • Studies in P. acnes revealed HemH-HemQ interactions that may be critical for function

    • Potential for disrupting pathway-specific protein complexes

    • Design of peptidomimetics targeting interaction surfaces

  • Regulatory mechanisms:

    • Differences in allosteric regulation between pathways

    • Identification of bacterial-specific regulatory sites

    • Development of inhibitors that lock the enzyme in inactive conformations

This comparative approach capitalizes on the evolutionary divergence between protoporphyrin-dependent ferrochelatases (as in Brucella) and coproporphyrin-dependent ferrochelatases (as in Gram-positive bacteria), enabling the design of highly selective inhibitors with reduced potential for off-target effects on human ferrochelatase.

What challenges are associated with the enzymatic characterization of recombinant B. suis ferrochelatase?

Enzymatic characterization of recombinant B. suis ferrochelatase presents several significant challenges:

  • Substrate instability:

    • Protoporphyrin IX is highly photosensitive and prone to oxidation

    • Solution: Prepare fresh solutions in amber vials, use anaerobic techniques, and include antioxidants such as ascorbate (1-5 mM)

  • Metal ion oxidation:

    • Ferrous iron (Fe²⁺) rapidly oxidizes to ferric iron (Fe³⁺), which is not a substrate

    • Solution: Prepare iron solutions immediately before use, maintain reducing conditions with ascorbate or DTT, and use anaerobic chambers for highest sensitivity assays

  • Detergent interference:

    • Detergents required to solubilize porphyrins can affect enzyme activity

    • Solution: Optimize detergent type and concentration (typically 0.1-0.5% Triton X-100), maintain consistent detergent levels across experiments, and include appropriate controls

  • Enzyme instability:

    • Ferrochelatase may lose activity during purification and storage

    • Solution: Include glycerol (10-20%) and reducing agents in all buffers, minimize freeze-thaw cycles, and determine activity immediately after thawing

  • Assay limitations:

    • Spectral overlap between substrate and product can complicate analysis

    • Solution: Use differential spectroscopy, HPLC separation methods, or alternative metal ions (Zn²⁺) that form fluorescent products

  • Product inhibition:

    • Heme can bind to ferrochelatase and inhibit activity

    • Solution: Use continuous assays to measure initial rates, include albumin to sequester heme product, and design kinetic experiments to account for product inhibition

Addressing these challenges requires careful experimental design and rigorous controls to ensure reliable and reproducible characterization of B. suis ferrochelatase activity.

How can researchers overcome expression and purification challenges with recombinant B. suis ferrochelatase?

Researchers can overcome expression and purification challenges with recombinant B. suis ferrochelatase through several strategic approaches:

  • Codon optimization:

    • Analyzing and adjusting codon usage for E. coli expression

    • Using specialized strains like Rosetta or CodonPlus to supply rare tRNAs

    • Synthesizing codon-optimized genes for improved expression

  • Expression optimization:

    • Testing multiple constructs with different N- and C-terminal boundaries

    • Exploring various solubility-enhancing fusion tags (MBP, SUMO, Trx)

    • Fine-tuning induction parameters (temperature, IPTG concentration, time)

    • Supplementing growth media with δ-aminolevulinic acid (50-100 μM) as a metabolic precursor

  • Solubility enhancement:

    • Co-expression with molecular chaperones (GroEL/ES, DnaK/J/GrpE)

    • Addition of osmolytes (glycerol, trehalose) to lysis and purification buffers

    • Inclusion of low concentrations of detergents (0.05-0.1% Triton X-100)

  • Purification optimization:

    • Using tandem affinity tags for higher purity

    • Implementing on-column refolding protocols if inclusion bodies form

    • Employing size-exclusion chromatography as a final polishing step

    • Including protease inhibitors throughout purification process

  • Stability maintenance:

    • Adding reducing agents to prevent oxidation of cysteine residues

    • Including stabilizing agents (10-20% glycerol, 100-200 mM NaCl)

    • Storing protein at high concentration (>1 mg/ml) to prevent surface denaturation

    • Using appropriate buffer systems (typically HEPES or Tris at pH 7.5-8.0)

These approaches can be systematically tested and combined to develop an optimized protocol for the expression and purification of active B. suis ferrochelatase, enabling subsequent structural and functional characterization.

What considerations are important when designing mutagenesis studies of B. suis ferrochelatase?

Designing effective mutagenesis studies of B. suis ferrochelatase requires careful consideration of several key factors:

  • Target residue selection based on multiple alignments:

    • Conserved residues across all ferrochelatases (likely essential for catalysis)

    • Residues conserved only in bacterial ferrochelatases (potential specificity determinants)

    • Brucella-specific residues (possible adaptation to intracellular lifestyle)

    • Known functional residues from related ferrochelatases, such as the conserved histidine and glutamate residues identified in B. subtilis ferrochelatase

  • Mutation type selection:

    • Conservative substitutions to probe subtle effects on function

    • Charge reversal to disrupt electrostatic interactions

    • Alanine scanning to identify essential side chains

    • Cysteine substitutions for subsequent chemical modification studies

  • Structure-guided approach:

    • Generate homology model based on related ferrochelatases

    • Target residues in the substrate binding pocket, metal coordination site, and dimer interface

    • Consider mutations affecting protein dynamics rather than just static structure

    • Examine potential allosteric sites or protein-protein interaction interfaces

  • Functional validation strategy:

    • In vitro enzymatic assays with purified proteins

    • In vivo complementation of hemH mutants

    • Cellular localization studies to confirm proper folding and targeting

    • Thermal stability assessment to distinguish catalytic from structural effects

  • Comprehensive phenotypic characterization:

    • Growth in iron-limited media

    • Resistance to oxidative stress

    • Intracellular survival in macrophages

    • Virulence in animal models

A well-designed mutagenesis study should include both positive controls (mutations known to abolish activity) and negative controls (mutations predicted to have minimal effect) to validate the experimental approach and interpretation of results.

How might cross-talk between ferrochelatase and RNA regulatory networks influence Brucella virulence?

Recent research suggests intriguing connections between ferrochelatase and RNA regulatory networks in Brucella that may influence virulence:

  • Hfq-mediated regulation:

    • The RNA chaperone Hfq is essential for Brucella virulence

    • Hfq deletion mutants in B. abortus show phenotypes similar to hemH mutants, including increased sensitivity to H₂O₂, reduced acid stress resistance, failure to replicate in macrophages, and rapid clearance from infected mice

    • Transcriptome-wide identification of Hfq-associated RNAs in B. suis suggests potential regulation of iron and heme metabolism genes

  • Small RNA involvement:

    • Small regulatory RNAs (sRNAs) often function in bacterial stress responses and virulence regulation

    • The AbcR1 and AbcR2 sRNAs identified in Brucella affect survival in macrophages and colonization in mice

    • These sRNAs could potentially regulate hemH or other heme biosynthesis genes directly or indirectly

  • Iron-responsive regulation:

    • Iron availability is a key environmental signal during infection

    • Iron-responsive sRNAs could coordinate ferrochelatase expression with iron acquisition systems

    • This coordination would ensure optimal iron utilization under the iron-limited conditions inside host cells

  • Integrated stress response:

    • Heme synthesis, via ferrochelatase, is likely integrated with broader stress response networks

    • RNA regulators may serve as intersection points between different stress response pathways

    • This integration would allow Brucella to coordinate heme synthesis with other aspects of intracellular adaptation

Understanding these regulatory connections could reveal new approaches to disrupt Brucella virulence by targeting the RNA regulatory networks that control ferrochelatase expression and function during infection.

What possibilities exist for developing vaccines based on hemH-attenuated Brucella strains?

Development of vaccines based on hemH-attenuated Brucella strains presents several promising possibilities:

  • Rationale for hemH attenuation:

    • hemH mutants show significant attenuation in virulence models

    • The mutants maintain antigenic properties while being unable to establish chronic infection

    • B. abortus hemH mutants can be considered auxotrophic mutants, a class that has been explored as candidates for live vaccines due to their known attenuation

  • Potential vaccine strategies:

    • Fully deleted hemH strains as severely attenuated live vaccines

    • Conditionally attenuated strains with regulated hemH expression

    • Strains with partial hemH function through specific mutations

    • Combination of hemH mutation with other attenuating mutations

  • Comparative advantages:

    • Other described Brucella auxotrophic mutants include B. melitensis purE and B. suis aroC mutants

    • hemH mutants provide an alternative attenuation mechanism targeting a different metabolic pathway

    • Multiple attenuated strains could be developed for different vaccination contexts

  • Safety considerations:

    • Reversion frequency must be carefully assessed

    • Complementation studies have shown that reintroduction of functional hemH restores virulence

    • Second-site mutations might be introduced to further reduce reversion potential

  • Efficacy parameters:

    • Ability to induce protective cell-mediated immunity

    • Duration of immune response

    • Cross-protection against different Brucella species

    • Balance between attenuation and immunogenicity

The potential for hemH-attenuated vaccine strains represents an important application of the fundamental understanding of ferrochelatase's role in Brucella pathogenesis, potentially leading to improved vaccines for brucellosis prevention in both animals and humans.

How can systems biology approaches integrate ferrochelatase function with global metabolic networks in Brucella?

Systems biology approaches offer powerful tools to integrate ferrochelatase function with global metabolic networks in Brucella:

  • Multi-omics integration:

    • Combining transcriptomics, proteomics, and metabolomics data from wild-type and hemH mutant strains

    • Identifying metabolic pathways affected by ferrochelatase disruption beyond heme biosynthesis

    • Mapping compensatory responses to ferrochelatase deficiency

  • Network modeling:

    • Constructing genome-scale metabolic models incorporating ferrochelatase and heme-dependent reactions

    • Performing flux balance analysis to predict metabolic adaptations during infection

    • Identifying synthetic lethal interactions with hemH for potential combination drug targets

  • Interspecies comparative analysis:

    • Comparing metabolic networks across Brucella species with different host preferences

    • Identifying species-specific adaptations in heme utilization and biosynthesis

    • Correlating network differences with host range and virulence characteristics

  • Temporal dynamics during infection:

    • Monitoring transcriptional and metabolic changes during different stages of infection

    • Correlating hemH expression with global metabolic shifts

    • Identifying key transition points where ferrochelatase activity becomes critical

  • Host-pathogen interaction modeling:

    • Integrating bacterial and host metabolic networks

    • Modeling competition for iron and heme precursors

    • Predicting metabolic vulnerabilities at the host-pathogen interface

These systems biology approaches would provide a comprehensive understanding of how ferrochelatase function is integrated within the broader metabolic network of Brucella, revealing emergent properties not apparent from reductionist approaches and identifying novel intervention points for therapeutic development.

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