Recombinant Clostridium kluyveri Translation initiation factor IF-2 (infB), partial

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Description

Recombinant Production and Purification

Recombinant IF-2 fragments are typically expressed in E. coli systems. Key steps and properties include:

ParameterDetails
Expression systemE. coli BL21(DE3) with plasmid vectors (e.g., pET-based systems) .
Protein sizePartial IF-2 (~50–70 kDa, depending on truncation) .
PurificationAffinity chromatography (His-tag), followed by gel filtration .
Purity>85% (verified via SDS-PAGE) .

GTPase Activity and Ribosomal Binding

  • IF-2’s G-domain hydrolyzes GTP upon ribosomal subunit joining. In Bacillus stearothermophilus, IF-2-G2 (isolated G-domain) retains GTPase activity and 50S subunit affinity .

  • Mutational studies show conserved residues (e.g., Asp in G2) are critical for GTP binding and hydrolysis .

Role in Translation Initiation

  • IF-2β (shorter isoform) is translated from an internal infB start site, independent of IF-2α proteolysis .

  • In C. kluyveri, IF-2 likely supports caproic acid biosynthesis by regulating enzymes like butyryl-CoA dehydrogenase (Bcd) and electron-transferring flavoproteins (EtfAB) .

Applications and Research Implications

  • Biotechnology: Engineered IF-2 variants could optimize C. kluyveri’s metabolic pathways for biofuel (e.g., hexanoate) production .

  • Structural studies: Recombinant IF-2 fragments enable cryo-EM and NMR studies to map ribosome interaction sites .

Comparative Genomic Analysis

C. kluyveri’s genome (strain JZZ) exhibits unique features compared to other clostridia:

FeatureC. kluyveri JZZ C. botulinum (B2V4G9)
Chromosome length4.45 Mb4.1 Mb
Putative IF-2 domainsG2-G3, C1-C2G2-G3, C1-C2
Unique genes960 (defense mechanisms)420 (neurotoxin synthesis)

Key Research Gaps

  • Direct structural or functional data on C. kluyveri IF-2 remains absent.

  • The interplay between IF-2 and metabolic enzymes (e.g., Bcd/EtfAB complexes) warrants experimental validation .

Product Specs

Form
Lyophilized powder. We will ship the in-stock format, but you can specify a format when ordering, and we will fulfill your request.
Lead Time
Delivery times vary based on purchase method and location. Consult local distributors for specific delivery times. All proteins are shipped with blue ice packs by default. Dry ice shipping is available upon request for an extra fee.
Notes
Avoid repeated freeze-thaw cycles. Working aliquots can be stored at 4°C for up to one week.
Reconstitution
Briefly centrifuge the vial before opening. Reconstitute the protein in sterile deionized water to 0.1-1.0 mg/mL. Add 5-50% glycerol (final concentration) and aliquot for long-term storage at -20°C/-80°C. Our default final glycerol concentration is 50%.
Shelf Life
Shelf life depends on storage conditions, buffer ingredients, storage temperature, and protein stability. Liquid form is generally stable for 6 months at -20°C/-80°C. Lyophilized form is generally stable for 12 months at -20°C/-80°C.
Storage Condition
Store at -20°C/-80°C upon receipt. Aliquot for multiple uses. Avoid repeated freeze-thaw cycles.
Tag Info
The tag type is determined during manufacturing. If you have a specific tag type requirement, please inform us, and we will prioritize producing it with your specified tag.
Synonyms
infB; CKL_1431Translation initiation factor IF-2
Buffer Before Lyophilization
Tris/PBS-based buffer, 6% Trehalose.
Datasheet
Please contact us to get it.
Protein Length
Partial
Purity
>85% (SDS-PAGE)
Species
Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)
Target Names
infB
Uniprot No.

Target Background

Function
Essential for initiating protein synthesis. Protects formylmethionyl-tRNA from hydrolysis and facilitates its binding to the 30S ribosomal subunit. Also involved in GTP hydrolysis during 70S ribosomal complex formation.
Database Links
Protein Families
TRAFAC class translation factor GTPase superfamily, Classic translation factor GTPase family, IF-2 subfamily
Subcellular Location
Cytoplasm.

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