Recombinant IFNL3 consists of the mature human IL-28B protein (175 amino acids) with a C-terminal 6xHis tag and lacks N-glycosylation sites . Key specifications include:
IFNL3 is produced in mammalian or human cell expression systems to ensure proper post-translational modifications:
Expression Hosts: Human cells (HEK293) , unspecified mammalian cells
Bioactivity Validation: Standardized against international reference materials
Inhibits encephalomyocarditis virus (EMCV) in human A549 lung carcinoma cells (EC₅₀ ~1 U/mL) .
Activates JAK-STAT pathways via the heterodimeric receptor IL-10Rβ/IFN-λR1, inducing ISG expression (e.g., MX1, ISG15) .
Exhibits 16-fold higher specific activity than IFNL2 and 2-fold higher than IFNL1 in comparative studies .
Enhances MHC class I antigen presentation and synergizes with IRF7/NF-κB p65 for transcriptional activation .
Reduces lung viral titers in murine models of influenza, RSV, and SARS-CoV-2 without inducing neutrophilia .
Viral Infections: Reduces HMPV titers by 3-log in murine lungs .
Cancer: Demonstrates antiproliferative effects in vitro and antitumor activity in xenograft models .
Autoimmunity: Linked to autoantibody regulation in critical influenza pneumonia .
Interferon lambda-3 (IFNL3), formerly known as IL-28B, is a member of the type III interferon family which also includes IFNL1 (IL-29) and IFNL2 (IL-28A). These cytokines are class II cytokine receptor ligands that are distantly related to members of the IL-10 family and type I IFN family . IFNL3 demonstrates significant potency differences compared to other type III interferons:
IFNL3 possesses the highest specific activity among human IFNL subtypes
It exhibits approximately 2-fold higher activity than IFNL1
Human IFNL3 shares 94% amino acid identity with IFNL2 and 69% with IFNL1
The mature human IFNL3 protein consists of 175 amino acids (lacking N-glycosylation sites) and has a molecular weight of approximately 19.6 kDa .
IFNL3 signals through a distinct heterodimeric receptor complex that differs from type I interferon receptors:
The receptor is composed of IL-10 receptor β (IL-10Rβ) and the unique IFNL receptor α (IL-28Rα, also known as IFNL-R1)
Unlike type I interferon receptors which are expressed on virtually all cells, the type III interferon receptor shows limited expression
Receptor engagement leads to Jak-STAT signaling pathway activation
The signaling results in phosphorylation of STATs and formation of the IFN-stimulated regulatory factor 3 (ISGF-3) transcription factor complex
This pathway ultimately induces interferon-stimulated genes (ISGs) that mediate antiviral activity
Recent research indicates that human immune cells express both membrane-bound IFNL-R1 (mIFNL-R1) and soluble IFNL-R1 (sIFNL-R1) variants, with the soluble form potentially inhibiting ISG induction by IFNL3 .
Proper handling of recombinant IFNL3 is critical for maintaining its biological activity:
For carrier-containing formulations, the protein is typically supplied frozen in phosphate buffered saline (PBS) containing 0.1% bovine serum albumin (BSA) . The carrier protein enhances stability, increases shelf-life, and allows storage at more dilute concentrations compared to carrier-free versions .
Several bioassay systems have been validated for measuring IFNL3 activity:
Cytopathic effect inhibition assay: The standard method uses human lung carcinoma A549 cells challenged with encephalomyocarditis virus (EMCV), with an EC50 of approximately 1 U/ml
Antiviral protection assays: Using various viruses including HSV-2, reovirus, Sendai virus, or influenza virus
Reporter assays: Using ISRE (Interferon-Stimulated Response Element)-driven luciferase reporters to measure pathway activation
ISG induction measurement: Quantification of interferon-stimulated gene expression by RT-qPCR
When comparing activities between different IFNL proteins, it's important to note that IFNL3 has been shown to be more potent than other subtypes, which should be considered when designing dose-response experiments .
Recent research has revealed differential IFNL3 responsiveness across human immune cell subsets, challenging previous mouse model findings:
| Immune Cell Type | IFNL-R1 Expression | IFNL3 Binding | ISG Response |
|---|---|---|---|
| B cells | Moderate | Yes | Moderate |
| CD8+ T cells | Moderate | Yes | Moderate |
| CD4+ T cells | Low (increases after TCR stimulation) | Limited | Limited (increases after activation) |
| Monocytes | Low | No | Minimal |
| Neutrophils | Low | No | Minimal |
| Natural killer cells | Low | No | Minimal |
This differential responsiveness can be explained by:
Various expression levels of membrane-bound IFNL-R1
Different ratios of soluble versus membrane-bound IFNL-R1
T-cell receptor stimulation specifically upregulates membrane-bound IFNL-R1 expression in CD4+ T cells, enhancing antiviral gene induction
These findings indicate that IFNL3 directly interacts with human adaptive immune cells, unlike what has been previously observed in mouse models, suggesting potential applications for both mucosal and blood-borne viral infection interventions .
Genetic variants near the IFNL3 gene have significant associations with disease outcomes:
HCV infection: SNPs around IFNL3 strongly associate with both spontaneous clearance of HCV and response to interferon-based therapy
COVID-19: Recent studies suggest that reduced IFNL1 and IFNL2, but not IFNL3, are associated with worse outcomes in COVID-19 patients
Several potentially causal SNPs have been identified:
| SNP | Location | Functional Effect | Disease Association |
|---|---|---|---|
| rs28416813 | Promoter region | Affects transcription | Protective in HCV infection |
| rs4803217 | 3'UTR | Influences post-transcriptional events | Protective in HCV infection |
| rs8103142 | Coding region (K70R) | No functional impact detected | In linkage disequilibrium with causal SNPs |
| rs4803219 | Promoter region | No functional impact detected | In linkage disequilibrium with causal SNPs |
The functional SNPs appear to influence transcription and post-transcriptional events that may lead to increased IFNL3 expression in individuals carrying the protective alleles .
Different expression systems produce recombinant IFNL3 with varying yields and activities:
When using E. coli expression systems, researchers have developed optimization strategies:
IPTG concentration, temperature, and incubation time affect protein expression levels
Inclusion body approach with 6His-tag facilitates purification
Specific refolding methods have been developed for effective recovery of active protein
Studies comparing commercially available preparations with laboratory-produced IFNL3 have found that optimized production methods can yield superior activity .
Species-specific differences in IFNL3 activity and receptor distribution have important implications for research:
Mouse and human IFNL3 exhibit some species specificity, although much less than observed with type I interferons
In humans, IFNL3 has broader effects on immune cells than previously reported in mouse models
Human adaptive immune cells (B cells, CD8+ T cells) directly respond to IFNL3, while the response pattern differs in mice
Mouse IFNL3 (produced from Asp20-Val193, with an N-terminal Met) is commercially available for comparative studies
These species differences are crucial to consider when:
Designing animal studies
Extrapolating results from mouse to human systems
Developing therapeutic applications based on IFNL3 biology
Several techniques are available for investigating IFNL3-induced gene expression:
| Method | Application | Advantages | Considerations |
|---|---|---|---|
| RT-qPCR | Targeted analysis of specific ISGs | Quantitative, sensitive | Limited to pre-selected genes |
| RNA-Seq | Genome-wide transcriptome analysis | Comprehensive, identifies novel targets | Requires sophisticated bioinformatic analysis |
| ISRE reporter assays | Pathway activation measurement | High-throughput screening capability | May not capture gene-specific regulation |
| ChIP-Seq | Identification of transcription factor binding sites | Maps regulatory regions | Requires specific antibodies |
Recent transcriptome analyses have identified distinct patterns of gene expression:
In M1 macrophages, 1123 genes were significantly affected by IFNL3 treatment
In M2 macrophages, over 2300 genes were significantly affected by IFNL3
IFNL3 and IFNL4 can induce identical responses in some cell lines, depending exclusively on canonical signaling
When designing experiments to study IFNL3-induced transcriptional responses, researchers should consider cell type-specific effects and the temporal dynamics of the response.
Maintaining IFNL3 activity requires careful attention to storage conditions:
Storage at -70°C or below is recommended for retention of full activity
Repeated freeze-thaw cycles significantly reduce biological activity
For long-term storage, aliquoting the reconstituted protein is advisable
Carrier proteins (like BSA) enhance stability during storage and freeze-thaw cycles
When conducting experiments with IFNL3, researchers should:
Thaw aliquots quickly at 37°C and keep on ice once thawed
Use manual defrost freezers to avoid temperature fluctuations
Consider fresh reconstitution for critical experiments requiring maximum activity
Effective IFNL3 concentrations vary by application and cell type:
Important considerations for concentration determination:
Epithelial cells typically require lower concentrations than immune cells
IFNL3 is approximately 2-fold more potent than IFNL1 and 16-fold more potent than IFNL2
Response thresholds may vary based on receptor expression levels
Dose-response curves should be established for each experimental system
Distinguishing IFNL3-specific effects requires careful experimental design:
Receptor knockout/knockdown approaches:
IFNL-R1 knockout cells respond to type I but not type III interferons
IL-10R2 knockout affects both IL-10 family and type III interferon signaling
Neutralizing antibodies:
Anti-IFNL-R1 antibodies specifically block type III interferon signaling
Anti-IFNL3 antibodies can block specific IFNL3 effects
Comparative studies:
Side-by-side comparison with type I interferons and other IFNL family members
Analysis of cell types with differential receptor expression patterns
Genetic approaches:
CRISPR/Cas9 modification of receptor components
Expression of dominant-negative receptor variants
Experimental validation of IFNL3 specificity is particularly important when studying complex biological systems where multiple interferon pathways may be active simultaneously.
Several promising therapeutic applications for IFNL3 are under investigation:
Viral infections:
Unlike type I interferons, IFNL3's receptor has limited distribution, potentially reducing systemic side effects
May be particularly valuable for infections at mucosal surfaces where IFNL receptor expression is enriched
Immune modulation:
Evidence suggests IFNL3 can influence T-cell responses and antibody production
May be useful for enhancing vaccine responses or modulating autoimmunity
Cancer immunotherapy:
Potential to enhance anti-tumor immune responses
May synergize with existing immunotherapeutic approaches
Recent COVID-19 research suggests type III interferons may play protective roles in early infection stages, highlighting the need for further investigation of therapeutic applications during viral pandemics .
Despite advances in IFNL3 research, several technical challenges persist:
Detection sensitivity:
Low physiological concentrations in many biological samples
Need for highly sensitive ELISAs or bioassays
Specificity issues:
Cross-reactivity between different IFNL family members in some assays
Some commercial antibodies may not distinguish between IFNL2 and IFNL3
Standardization:
Lack of universally accepted international standards for activity measurements
Variability between different commercial preparations
Receptor variant detection:
Difficulty distinguishing between membrane-bound and soluble receptor forms
Limited availability of specific antibodies for receptor isoforms