Recombinant Neurospora crassa SWR1-complex protein 4 (swc-4), partial

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Description

Key Features of SWC4 Homologs:

OrganismSWC4 FunctionInteraction PartnersPhenotypic Impact of Loss
Saccharomyces cerevisiaeStabilizes SWR1-C; H2A.Z deposition SWR1, ARP6, SWC6 Defective meiosis, transcriptional dysregulation
Arabidopsis thalianaRegulates vegetative phase change PIE1, ARP6, H2A.Z Early flowering, leaf serration
Metarhizium brunneumSecondary metabolite regulation, virulence SWR1-C subunits Reduced pathogenicity, SM deficiency
Neurospora crassaInferred chromatin remodeling BRD-8 (NuA4 complex) Hypothesized circadian defects

Functional Role in Chromatin Remodeling

SWC4 contributes to SWR1-C’s ATP-dependent H2A.Z deposition, which modulates nucleosome stability and transcriptional accessibility. In Neurospora:

  • Interactions with NuA4 Complex: SWR1-C collaborates with the NuA4 histone acetyltransferase complex (via BRD-8) to regulate circadian clock genes like frq. Loss of BRD-8 disrupts H4 acetylation and RNA Pol II recruitment, suggesting SWR1-C’s indirect role in transcriptional elongation .

  • DNA Repair and Genome Stability: SWR1-C subunits in plants and yeast facilitate double-strand break repair via homologous recombination . Neurospora SWC-4 may similarly stabilize chromatin during replication stress.

Recombinant Production and Applications

While no direct studies on Neurospora SWC-4 exist, recombinant methods for related proteins provide a template:

  • Expression System: Likely produced in E. coli with affinity tags (e.g., His-tag) for purification, as seen for Neurospora CBP-4 .

  • Functional Assays: Recombinant SWC-4 could be used to:

    • Study in vitro H2A.Z deposition kinetics.

    • Identify binding partners via pull-down assays .

    • Test genetic rescue in SWC4-deficient mutants .

Research Gaps and Future Directions

  1. Structural Characterization: Cryo-EM or X-ray crystallography of Neurospora SWR1-C would clarify SWC-4’s role in complex assembly.

  2. Phenotypic Analysis: Knockout mutants of swc-4 in Neurospora could elucidate its impact on circadian rhythms, stress responses, and development .

  3. Cross-Species Comparisons: Functional complementation assays using yeast or plant SWC4 mutants could validate evolutionary conservation .

Implications for Biotechnology

Engineering SWC-4 variants might enhance fungal strains for industrial applications (e.g., secondary metabolite overproduction) or CRISPR-based chromatin editing .

Product Specs

Form
Lyophilized powder
Note: We will prioritize shipping the format we have in stock. However, if you have specific requirements for the format, please indicate them when placing your order. We will fulfill your request.
Lead Time
Delivery time may vary based on the purchasing method or location. Please consult your local distributors for specific delivery timeframes.
Note: All of our proteins are shipped with standard blue ice packs. If you require dry ice shipping, please notify us in advance. Additional fees will apply.
Notes
Repeated freezing and thawing is not recommended. Store working aliquots at 4°C for up to one week.
Reconstitution
We recommend centrifuging this vial briefly before opening to ensure the contents settle to the bottom. Reconstitute the protein in deionized sterile water to a concentration of 0.1-1.0 mg/mL. We recommend adding 5-50% glycerol (final concentration) and aliquoting for long-term storage at -20°C/-80°C. Our default final glycerol concentration is 50%. Customers can use this as a reference.
Shelf Life
Shelf life is influenced by various factors such as storage conditions, buffer ingredients, temperature, and the inherent stability of the protein itself.
Generally, the shelf life of the liquid form is 6 months at -20°C/-80°C. The shelf life of the lyophilized form is 12 months at -20°C/-80°C.
Storage Condition
Store at -20°C/-80°C upon receipt. Aliquoting is necessary for multiple uses. Avoid repeated freeze-thaw cycles.
Tag Info
Tag type will be determined during the manufacturing process.
The tag type will be determined during the production process. If you have a specific tag type preference, please inform us, and we will prioritize developing the specified tag.
Synonyms
crc-1; swc4; 49D12.020; NCU04002; SWR1-complex protein 4; Chromatin-remodeling complex protein 1
Buffer Before Lyophilization
Tris/PBS-based buffer, 6% Trehalose.
Datasheet
Please contact us to get it.
Protein Length
Partial
Purity
>85% (SDS-PAGE)
Species
Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
Target Names
crc-1
Uniprot No.

Target Background

Function
This protein is a component of the SWR1 complex, which mediates the ATP-dependent exchange of histone H2A for the H2A variant H2A.Z. This process contributes to the transcriptional regulation of specific genes through chromatin remodeling. It is also a component of the NuA4 histone acetyltransferase complex, involved in the transcriptional activation of selected genes primarily by acetylation of nucleosomal histone H4 and H2A. The NuA4 complex is further implicated in DNA repair.
Database Links

KEGG: ncr:NCU04002

Protein Families
SWC4 family
Subcellular Location
Nucleus.

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