SWC4 contributes to SWR1-C’s ATP-dependent H2A.Z deposition, which modulates nucleosome stability and transcriptional accessibility. In Neurospora:
Interactions with NuA4 Complex: SWR1-C collaborates with the NuA4 histone acetyltransferase complex (via BRD-8) to regulate circadian clock genes like frq. Loss of BRD-8 disrupts H4 acetylation and RNA Pol II recruitment, suggesting SWR1-C’s indirect role in transcriptional elongation .
DNA Repair and Genome Stability: SWR1-C subunits in plants and yeast facilitate double-strand break repair via homologous recombination . Neurospora SWC-4 may similarly stabilize chromatin during replication stress.
While no direct studies on Neurospora SWC-4 exist, recombinant methods for related proteins provide a template:
Expression System: Likely produced in E. coli with affinity tags (e.g., His-tag) for purification, as seen for Neurospora CBP-4 .
Functional Assays: Recombinant SWC-4 could be used to:
Structural Characterization: Cryo-EM or X-ray crystallography of Neurospora SWR1-C would clarify SWC-4’s role in complex assembly.
Phenotypic Analysis: Knockout mutants of swc-4 in Neurospora could elucidate its impact on circadian rhythms, stress responses, and development .
Cross-Species Comparisons: Functional complementation assays using yeast or plant SWC4 mutants could validate evolutionary conservation .
Engineering SWC-4 variants might enhance fungal strains for industrial applications (e.g., secondary metabolite overproduction) or CRISPR-based chromatin editing .
KEGG: ncr:NCU04002