Recombinant Rat Suppressor of tumorigenicity 7 protein-like (St7l)

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Description

Introduction to Recombinant Rat Suppressor of Tumorigenicity 7 Protein-Like (St7l)

Recombinant Rat Suppressor of Tumorigenicity 7 Protein-Like (St7l) is a protein that has garnered significant attention in cancer research due to its potential role as a tumor suppressor. This protein is involved in various cellular processes, including cell cycle regulation and apoptosis, which are critical in controlling tumor growth. The recombinant form of St7l is engineered to study its functions and mechanisms in a controlled manner, often using cell lines and animal models.

Function and Mechanism of St7l

St7l functions primarily by inhibiting pathways that promote cell proliferation and tumorigenesis. One of the key pathways it affects is the Wnt/β-catenin signaling pathway, which is crucial for cell growth and differentiation. By suppressing this pathway, St7l can act as a tumor suppressor, reducing the growth and spread of cancer cells .

Mechanism of Action:

  • Inhibition of Wnt/β-catenin Pathway: St7l reduces the expression of β-catenin and its downstream effectors, such as C-myc and cyclin D, thereby inhibiting cell proliferation .

  • Induction of Apoptosis: Overexpression of St7l promotes apoptosis in cancer cells by increasing the activation of caspases and PARP cleavage .

  • Cell Cycle Regulation: St7l can arrest the cell cycle at the G1 phase, preventing cells from entering the S phase where DNA replication occurs .

Role in Cancer

St7l plays a significant role in various types of cancer by acting as a tumor suppressor. Its expression is often downregulated in cancer tissues compared to normal tissues, which correlates with the progression of cancer .

Cancer Types:

  • Cervical Cancer: St7l is downregulated in cervical cancer tissues and cells, contributing to cancer progression .

  • Hepatocellular Carcinoma (HCC): St7l inhibits the AKT/GSK3β pathway, which is involved in HCC progression .

Regulation by MicroRNAs

St7l is regulated by several microRNAs (miRNAs), which are small non-coding RNAs that bind to messenger RNA (mRNA) to inhibit its translation. Notable miRNAs targeting St7l include miR-378 and miR-23b .

MicroRNA Regulation:

  • miR-378: Targets St7l mRNA, leading to its downregulation and promoting cancer progression .

  • miR-23b: Also targets St7l, contributing to its suppression in HCC .

Expression Levels of St7l in Cancer Cells:

Cell LineST7L mRNA Level (Relative to Normal Cells)
HeLaSignificantly decreased
SiHaSignificantly decreased
C33ASignificantly decreased
CaSKiSignificantly decreased

Effect of St7l Overexpression on Cell Viability:

Cell LineOverexpression Effect on Viability
HeLaDecreased viability
SiHaDecreased viability

Cell Cycle Distribution After St7l Overexpression:

PhaseHeLa Cells (%)SiHa Cells (%)
G1IncreasedIncreased
SDecreasedDecreased

Product Specs

Form
Lyophilized powder
Note: While we prioritize shipping the format currently in stock, please specify your format preference during ordering. We will accommodate your request whenever possible.
Lead Time
Delivery times vary depending on the purchasing method and location. Please contact your local distributor for precise delivery estimates.
Note: Standard shipping includes blue ice packs. Dry ice shipping requires prior arrangement and incurs additional charges.
Notes
Avoid repeated freeze-thaw cycles. Store working aliquots at 4°C for up to one week.
Reconstitution
Centrifuge the vial briefly before opening to collect the contents. Reconstitute the protein in sterile, deionized water to a concentration of 0.1-1.0 mg/mL. For long-term storage, we recommend adding 5-50% glycerol (final concentration) and aliquoting at -20°C/-80°C. Our standard glycerol concentration is 50%, which can serve as a reference.
Shelf Life
Shelf life depends on various factors including storage conditions, buffer composition, temperature, and protein stability. Generally, liquid formulations have a 6-month shelf life at -20°C/-80°C, while lyophilized forms have a 12-month shelf life at -20°C/-80°C.
Storage Condition
Upon receipt, store at -20°C/-80°C. Aliquot to prevent repeated freeze-thaw cycles.
Tag Info
Tag type is determined during manufacturing.
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Synonyms
St7l; Suppressor of tumorigenicity 7 protein-like
Buffer Before Lyophilization
Tris/PBS-based buffer, 6% Trehalose.
Datasheet
Please contact us to get it.
Expression Region
1-559
Protein Length
full length protein
Species
Rattus norvegicus (Rat)
Target Names
St7l
Target Protein Sequence
MADGDYFAEAARAVGCPHAPVPGLGLGPPLGWKERLKAGLANSGSTLWFLAGLGLLYALR VPLRLCDNVTAVTGFLSSLTPKFYVALTGTSSLISGLIFIFEWWYFHKHGTSFIEQVSIS HLRPLMGGTESSISEPGSPANSRESETLRHHHLSECKVWRNPLNLFRGAEYRRYTWVTGK EPLTYYDMNLSAQDHQTFFTCETDFLRPSDTVMQKAWRERNPPARIKAAYQALELNNDCA TAYVLLAEEEATTIVDAERLFKQALRAGEIIYRRSQQCQHQSPQHEAQLRRDTNVLVYIK RRLAMCARKLGRIREAVKIMRDLMKEFPPLTMLNIHENLLESLLELQAYADVQAVLAKYD DISLPKSAAICYTAALLKTRTVSDKFSPETAFRKGLSTAEINAVEAIHRAVEFNPHVPKY LLEMKSLILPPEHILKRGDSEAIAYAFFHLQHWKRIEGALNLLQCTWEGTFRMIPYPLEK GHLFYPYPSCTETADRELLPTFHHVSVYPKKELPFFIHFTAGLCSSTAMIALLTHQFPEV MGVFAKAVSMISRTCVEYL
Uniprot No.

Target Background

Database Links
Protein Families
ST7 family
Subcellular Location
Membrane; Multi-pass membrane protein.

Q&A

What is Rat Suppressor of Tumorigenicity 7 Protein-like (St7l) and what are its key characteristics?

Rat Suppressor of Tumorigenicity 7 Protein-like (St7l) is a protein with predicted functions in negative regulation of cell growth and is considered to be a structural constituent of the ribosome . St7l belongs to a family of tumor suppressor genes that includes ST7, with which it shares significant homology. Based on human ST7L studies, the rat ortholog likely encodes a polypeptide containing a leucine zipper domain and multiple tyrosine-phosphorylation sites that are critical for its function . The protein contains several conserved domains (referred to as S7H1, S7H2, and S7H3) that are shared among ST7L proteins across different species, suggesting evolutionary conservation of functional regions . These structural features are essential for understanding its role in cellular processes related to tumor suppression.

How does St7l function in tumor suppression mechanisms?

St7l functions primarily as a tumor suppressor through its involvement in several key signaling pathways. Based on studies of its human homolog, St7l likely inhibits the β-catenin signaling pathway, which is frequently dysregulated in various cancers . The protein appears to interact with the carboxyl terminal region of AKT and suppress the AKT/GSK3β/β-catenin pathway, which is critical for controlling cell proliferation and metastasis . This mechanism has been particularly observed in hepatocellular carcinoma (HCC) cells, where the suppression of this pathway by ST7L can inhibit cancer progression. The protein's functioning may be regulated post-transcriptionally by microRNAs, as has been demonstrated with miR-23b, which can silence ST7L expression by binding to its 3′-untranslated region (3′-UTR) . Understanding these molecular mechanisms provides insight into how St7l may contribute to tumor resistance in various experimental models.

How is St7l gene expression regulated in rat models?

Rat St7l gene expression appears to be regulated through multiple mechanisms, including chemical exposure and potentially microRNA regulation. Chemical compounds such as 1,2-dibromoethane (ethylene dibromide) and 1,2-dimethylhydrazine have been shown to decrease St7l expression in rat models . These findings suggest that St7l expression is sensitive to environmental factors and chemical exposures, which may have implications for understanding chemical carcinogenesis. Additionally, based on studies of human ST7L, it is likely that post-transcriptional regulation by microRNAs plays a significant role in controlling St7l levels in rats as well. For instance, in human studies, miR-23b has been identified as directly targeting ST7L and suppressing its tumor-suppressive functions . Similar microRNA-mediated regulation mechanisms likely exist in rat models, though specific microRNAs targeting rat St7l would need to be identified through dedicated studies examining rat-specific regulatory networks.

What experimental approaches are most effective for studying St7l protein interactions in rat tumor models?

For investigating St7l protein interactions in rat tumor models, a multi-faceted experimental approach is recommended:

  • Co-immunoprecipitation (Co-IP) assays: These are particularly valuable for studying St7l's interaction with components of the AKT/GSK3β/β-catenin pathway. Recombinant St7l protein tagged with epitopes such as FLAG or HA can be expressed in rat cell lines, followed by Co-IP to pull down interaction partners .

  • Yeast two-hybrid screening: This approach can help identify novel binding partners of St7l beyond known pathway components, expanding our understanding of its functional networks.

  • Proximity ligation assays (PLA): For detecting protein-protein interactions in situ within rat tissue samples, PLA offers visualization of interactions in their native cellular context.

  • CRISPR-Cas9 gene editing: Creating St7l knockout or knock-in rat models allows for studying phenotypic changes and pathway alterations in the absence or modification of St7l.

  • RNA-sequencing after St7l modulation: This approach helps identify downstream genes affected by St7l expression changes, providing insight into its broader regulatory network.

When planning these experiments, it's critical to include appropriate controls and validate findings using multiple methodological approaches to ensure robustness of results. Tissue-specific expression patterns should also be considered when selecting appropriate rat cell lines or primary cells for these studies.

How do chemical exposures specifically affect St7l expression and function in experimental rat models?

Chemical exposures have been shown to significantly impact St7l expression in rat models through various mechanisms. Specifically, compounds such as 1,2-dibromoethane (ethylene dibromide) and 1,2-dimethylhydrazine have been demonstrated to decrease St7l expression . To effectively study these interactions, researchers should implement:

  • Dose-response studies: Exposing rat cells or tissues to varying concentrations of test chemicals while measuring St7l expression at both mRNA (via qRT-PCR) and protein (via Western blotting) levels.

  • Chromatin immunoprecipitation (ChIP) assays: These can reveal whether chemical-induced transcription factors directly bind to the St7l promoter region, affecting its transcription.

  • Reporter gene assays: Constructing St7l promoter-luciferase reporter constructs allows for quantitative assessment of how chemicals affect St7l transcriptional activity.

  • Methylation analysis: Determining whether chemical exposures alter DNA methylation patterns in the St7l promoter region, potentially leading to epigenetic silencing.

The table below summarizes key chemical compounds known to affect St7l expression in rat models:

Chemical CompoundEffect on St7lExposure MethodDetection MethodReference
1,2-dibromoethaneDecreased expressionIn vivo exposuremRNA quantification
1,2-dimethylhydrazineDecreased expressionIn vivo exposuremRNA quantification
1,2-dimethylhydrazineMultiple interactionsIn vivo exposureVarious molecular assays

Understanding these chemical-gene interactions provides valuable insights into potential environmental factors that may influence tumor development through St7l-dependent mechanisms.

How does rat St7l compare to human ST7L in terms of structure, function, and relevance to cancer research?

Comparative analysis between rat St7l and human ST7L reveals important similarities and differences relevant to cancer research:

Structural Comparison:
Human ST7L encodes a 575-amino-acid polypeptide with a leucine zipper domain and three tyrosine-phosphorylation sites . While the rat ortholog is predicted to share similar structural features, species-specific differences likely exist. Human ST7L contains conserved domains (S7H1, S7H2, and S7H3) that are likely also present in rat St7l, given their evolutionary conservation . The leucine zipper domain, which is unique to ST7L compared to ST7, suggests potential differences in protein-protein interactions and DNA binding capabilities between these related tumor suppressors.

Genomic Context:
Human ST7L is located on chromosome 1p13 and is clustered with WNT2B genes in a tail-to-tail manner with an interval of less than 5.0-kb . This genomic organization is significant as the ST7L-WNT2B cluster appears to have evolved from duplication of an ancestral ST7-WNT2 gene cluster. Understanding whether this genomic arrangement is conserved in rats could provide insights into evolutionary conservation of regulatory mechanisms.

Research Applications:
The differences and similarities between rat and human orthologs have important implications for translational research. Rat models studying St7l may provide valuable insights into human cancer biology, particularly for cancers involving chromosome 1p13 alterations, which include breast cancer, germ cell tumors, squamous cell carcinoma, non-small cell lung cancer, and several others where ST7L may function as a tumor suppressor .

What methodologies are recommended for investigating St7l's role in the AKT/GSK3β/β-catenin signaling pathway?

To effectively investigate St7l's role in the AKT/GSK3β/β-catenin signaling pathway in rat models, researchers should implement multiple complementary approaches:

  • Phosphorylation analysis: Western blotting with phospho-specific antibodies can be used to detect changes in the phosphorylation status of AKT, GSK3β, and β-catenin following St7l modulation. This approach provides direct evidence of St7l's impact on this signaling cascade .

  • TOP/FOP flash reporter assays: These luciferase-based assays specifically measure β-catenin-mediated transcriptional activity. Comparing results between St7l-overexpressing, normal, and St7l-knockdown rat cells can reveal the functional impact of St7l on Wnt/β-catenin signaling output.

  • Subcellular fractionation: This technique allows for assessment of β-catenin nuclear translocation, a key indicator of pathway activation, following St7l manipulation.

  • Immunofluorescence microscopy: Visualization of β-catenin localization (cytoplasmic versus nuclear) provides spatial information about pathway activation status in response to St7l modulation.

  • RNA-seq analysis: Transcriptome profiling after St7l overexpression or knockdown can identify changes in expression of downstream target genes of the AKT/GSK3β/β-catenin pathway.

  • Domain mapping experiments: Using truncated or mutated versions of St7l protein can identify which specific domains are required for interaction with AKT and subsequent pathway suppression.

  • In vivo analysis using rat models: Examining pathway components in tissues from rats with genetically modified St7l expression can provide physiologically relevant insights into pathway regulation.

Implementing these methodologies systematically can provide comprehensive understanding of how St7l mechanistically regulates this important cancer-related signaling pathway.

How do alternative splicing variants of St7l differ in their tumor suppressive capabilities?

Based on studies of human ST7L, which has at least four isoforms transcribed due to alternative splicing , rat St7l likely also exhibits multiple splice variants with potentially distinct functional properties. To investigate differences in tumor suppressive capabilities among these variants:

  • Isoform-specific expression analysis: RT-PCR and qPCR with primers spanning unique exon junctions can quantify the relative abundance of different St7l splice variants across normal and tumor rat tissues. This approach can reveal whether specific isoforms are selectively downregulated in cancer contexts.

  • Cloning and functional characterization: Each splice variant should be individually cloned and expressed in rat cell lines to assess their effects on:

    • Cell proliferation (using MTT or BrdU incorporation assays)

    • Colony formation capacity

    • Migration and invasion (using transwell assays)

    • Apoptosis induction (using Annexin V/PI staining)

    • Cell cycle progression (using flow cytometry)

  • Domain function analysis: Since alternative splicing may affect protein domain structure, it's essential to map which functional domains (e.g., leucine zipper, tyrosine phosphorylation sites) are present in each isoform and correlate this with their tumor suppressive functions .

  • Signaling pathway impact: Comparative analysis of how different isoforms affect the AKT/GSK3β/β-catenin pathway can be performed using phosphorylation-specific antibodies and reporter assays .

  • Protein-protein interaction profiles: Co-immunoprecipitation experiments with each isoform can identify whether they interact with different partner proteins, potentially explaining functional differences.

  • In vivo tumor suppression: Xenograft experiments using rat cancer cells expressing different St7l isoforms can provide the most physiologically relevant assessment of their tumor suppressive capacities.

This comprehensive approach would provide valuable insights into the functional diversity within the St7l gene family and potentially identify specific isoforms with enhanced tumor suppressive properties that could be exploited therapeutically.

What techniques should be used for purification and characterization of recombinant rat St7l protein?

For optimal purification and characterization of recombinant rat St7l protein, the following methodology is recommended:

Expression Systems:

  • Bacterial expression (E. coli): Use BL21(DE3) or Rosetta strains with pET or pGEX vectors for high-yield production, though solubility may be an issue for full-length protein.

  • Insect cell expression (Baculovirus): Sf9 or Hi5 cells often provide better folding for mammalian proteins with post-translational modifications.

  • Mammalian expression: HEK293 or CHO cells for experiments requiring mammalian-specific post-translational modifications.

Purification Strategy:

  • Affinity tags: N- or C-terminal His6, GST, or FLAG tags facilitate initial capture. Consider TEV or PreScission protease cleavage sites for tag removal.

  • Chromatography sequence:

    • Initial capture: Affinity chromatography (Ni-NTA for His-tagged protein)

    • Intermediate purification: Ion exchange chromatography

    • Polishing: Size exclusion chromatography to ensure homogeneity

Characterization Methods:

  • Purity assessment: SDS-PAGE with Coomassie staining (>95% purity target)

  • Identity confirmation: Western blotting and mass spectrometry

  • Structural integrity: Circular dichroism to verify secondary structure elements

  • Functional validation: AKT binding assays to confirm interaction with known partners

  • Thermal stability: Differential scanning fluorimetry (DSF) to assess protein stability

  • Oligomeric state: Size exclusion chromatography with multi-angle light scattering (SEC-MALS)

Storage Considerations:
Store purified protein in buffer containing 20-50 mM Tris-HCl (pH 7.5-8.0), 150-300 mM NaCl, 1-5 mM DTT or TCEP, and 10% glycerol. Aliquot and flash-freeze in liquid nitrogen for long-term storage at -80°C to avoid repeated freeze-thaw cycles.

This comprehensive purification and characterization workflow ensures production of high-quality recombinant rat St7l suitable for subsequent functional and structural studies.

How can researchers effectively analyze the impact of St7l on tumor growth in rat xenograft models?

To effectively analyze the impact of St7l on tumor growth in rat xenograft models, researchers should implement a comprehensive experimental approach:

Model Establishment:

  • Cell line modification: Generate stable rat cancer cell lines with:

    • St7l overexpression (using lentiviral vectors)

    • St7l knockdown (using shRNA or CRISPR-Cas9)

    • Controls (empty vector or scrambled shRNA/sgRNA)

  • In vitro validation: Prior to animal studies, confirm St7l expression levels by Western blot and qRT-PCR, and assess basic parameters such as proliferation rate changes.

Xenograft Procedure:

  • Animal selection: Use immunocompromised rats (nude or SCID) to prevent rejection of transplanted cells.

  • Injection method: Depending on the cancer type, use either:

    • Subcutaneous injection: 1-5×10^6 cells in Matrigel mixture for easily measurable tumors

    • Orthotopic implantation: For organ-specific tumor models with more relevant microenvironment

Monitoring Methods:

  • Tumor volume measurement: Use digital calipers to measure length (L) and width (W) and calculate volume using the formula V = (L×W²)/2, with measurements taken 2-3 times weekly.

  • Advanced imaging: Implement small animal imaging techniques such as:

    • Bioluminescence imaging (requires luciferase-expressing cells)

    • MRI for precise volumetric assessment

    • PET scanning for metabolic activity

  • Survival analysis: Conduct Kaplan-Meier survival curves between experimental groups.

Endpoint Analysis:

  • Tissue collection: Harvest tumors and relevant organs for ex vivo analysis.

  • Histopathological examination: Perform H&E staining and immunohistochemistry for:

    • Proliferation markers (Ki-67)

    • Apoptosis markers (cleaved caspase-3)

    • Angiogenesis markers (CD31)

  • Molecular analysis:

    • Western blotting for St7l expression and AKT/GSK3β/β-catenin pathway components

    • qRT-PCR for St7l and its downstream targets

    • RNA-seq for comprehensive transcriptome changes

Data Analysis:

  • Statistical methods: Apply appropriate tests (t-test, ANOVA, log-rank test) with sufficient sample sizes (typically n≥8 per group) to achieve statistical power.

  • Growth rate calculation: Determine tumor doubling time and growth rate constants for each experimental group.

  • Correlation analysis: Connect tumor growth parameters with molecular markers to establish mechanistic insights.

This comprehensive approach provides robust assessment of St7l's impact on tumor growth while generating mechanistic insights into its tumor suppressive functions in vivo.

How are contradictory findings about St7l function in different rat tissue types reconciled in the literature?

Contradictory findings regarding St7l function across different rat tissue types represent an important area for critical analysis. These contradictions may arise from several factors that should be systematically addressed:

Tissue-Specific Expression Patterns:
Research indicates that St7l may have variable expression levels across different rat tissues, suggesting tissue-specific regulatory mechanisms. To reconcile these differences, researchers should perform comprehensive expression profiling of St7l across multiple rat tissues using both qRT-PCR and immunohistochemistry techniques. This would establish a baseline tissue expression atlas against which experimental findings can be compared.

Isoform Distribution:
The presence of multiple St7l splice variants may contribute to contradictory findings if different isoforms predominate in different tissues. Tissue-specific isoform profiling using RT-PCR with isoform-specific primers would help clarify whether functional differences correlate with differential isoform expression.

Context-Dependent Interacting Partners:
St7l's function may be modulated by tissue-specific protein-protein interactions. Comparative immunoprecipitation followed by mass spectrometry across different tissue types could identify tissue-specific binding partners that might explain functional differences.

Methodological Reconciliation:
When directly comparing contradictory studies, careful attention should be paid to:

  • The specific rat strain used (genetic background influences)

  • Age of rats (developmental stage differences)

  • Experimental conditions (in vitro versus in vivo studies)

  • Analytical techniques (protein versus mRNA detection)

  • Cell culture conditions (2D versus 3D models)

Integration of Findings:
To reconcile contradictory findings, researchers should adopt a systems biology approach that integrates:

  • Gene expression data across tissues

  • Protein interaction networks

  • Signaling pathway analyses

  • Phenotypic outcomes

By contextualizing findings within this integrated framework, apparent contradictions can often be reconciled as tissue-specific variations of a more complex biological reality rather than true contradictions.

What are the current limitations in St7l research methodology that may lead to inconsistent experimental results?

Several methodological limitations in current St7l research may contribute to inconsistent experimental results:

Antibody Specificity Issues:
Commercial antibodies against St7l may vary in specificity and cross-reactivity with related proteins or isoforms. To address this:

  • Validate antibodies using positive controls (overexpression systems) and negative controls (knockdown/knockout systems)

  • Use multiple antibodies targeting different epitopes to confirm findings

  • Consider using epitope-tagged recombinant proteins for more specific detection

Isoform-Specific Analysis Challenges:
Given the presence of multiple St7l splice variants , research that fails to distinguish between isoforms may produce inconsistent results. Researchers should:

  • Design PCR primers that specifically detect individual splice variants

  • Use isoform-specific shRNAs/siRNAs for targeted knockdown

  • Clearly report which isoform(s) are being studied in publications

Variable Experimental Models:
Differences in experimental models contribute significantly to inconsistencies:

  • Cell line heterogeneity: Even within established cell lines, subpopulations with different characteristics may exist

  • Primary cell culture variations: Isolation methods and culture conditions affect cellular phenotypes

  • Animal model differences: Strain background, age, and housing conditions influence results

Technical Variability:
Inconsistencies also arise from technical factors:

  • RNA/protein extraction methods affecting yield and quality

  • Detection threshold differences between qPCR platforms

  • Normalization strategies for quantitative analyses

  • Statistical approaches and sample size limitations

Contextual Factors:
St7l function appears context-dependent, influenced by:

  • Cell density and growth conditions

  • Presence of chemical exposures (1,2-dibromoethane, 1,2-dimethylhydrazine)

  • Interaction with microRNAs like miR-23b (based on human studies)

  • Activation state of connected signaling pathways

Recommendations for Methodological Improvement:

  • Implement rigorous reporting standards for experimental conditions

  • Use multiple complementary techniques to verify key findings

  • Perform adequate biological replicates (minimum n=3) with appropriate statistical analysis

  • Conduct dose-response and time-course studies rather than single-point measurements

  • Validate findings across multiple experimental models (cell lines, primary cells, animal models)

  • Consider environmental factors that may influence St7l expression and function

Addressing these methodological limitations through rigorous experimental design and transparent reporting will help resolve inconsistencies and advance understanding of St7l biology.

What emerging technologies could advance our understanding of St7l's role in cancer suppression mechanisms?

Several cutting-edge technologies hold promise for deepening our understanding of St7l's role in cancer suppression:

Single-Cell Technologies:

  • Single-cell RNA sequencing (scRNA-seq): This technology can reveal heterogeneity in St7l expression within tumors and identify specific cell populations where St7l plays critical roles. By correlating St7l expression with other markers at single-cell resolution, researchers can map its involvement in cellular states associated with tumor suppression.

  • Single-cell proteomics: Emerging mass cytometry (CyTOF) and single-cell Western blotting technologies can analyze St7l protein levels alongside activation states of signaling pathways on a cell-by-cell basis, providing unprecedented resolution of its functional impact.

CRISPR Technologies:

  • CRISPR screening: Genome-wide or targeted CRISPR screens can identify genes that synthetically interact with St7l, revealing potential compensatory mechanisms or collaborative tumor suppression pathways.

  • CRISPR base editing/prime editing: These precise genome editing approaches allow introduction of specific St7l mutations found in tumors to evaluate their functional consequences without disrupting the entire gene.

  • CRISPRi/CRISPRa: These technologies enable tunable repression or activation of St7l expression, allowing dose-dependent studies of its tumor suppressive functions.

Structural Biology Approaches:

  • Cryo-electron microscopy: This technique could reveal the molecular structure of St7l alone and in complexes with interaction partners like AKT , providing mechanistic insight into how it regulates signaling pathways.

  • HDX-MS (Hydrogen-Deuterium Exchange Mass Spectrometry): This approach can map protein interaction interfaces between St7l and its binding partners, identifying critical contact residues.

Integrative Multi-omics:

  • Spatial transcriptomics: By preserving spatial information while profiling gene expression, this technique can map St7l activity within the tumor microenvironment.

  • Integrated multi-omics: Combining genomic, transcriptomic, proteomic, and metabolomic data from the same samples can provide a systems-level view of how St7l influences cellular states.

Advanced In Vivo Models:

  • Organoid technology: Patient-derived or rat-derived organoids with genetically modified St7l can serve as more physiologically relevant models than traditional cell lines.

  • Humanized rat models: Creating rats with humanized versions of St7l and related pathway components could improve translational relevance of findings.

By leveraging these emerging technologies, researchers can develop a more comprehensive and mechanistic understanding of St7l's tumor suppressor functions, potentially identifying new therapeutic opportunities targeting this pathway.

How might translational research on St7l contribute to the development of novel cancer therapeutics?

Translational research on St7l holds significant potential for developing novel cancer therapeutics through several promising avenues:

Pathway-Based Drug Development:
Understanding St7l's role in suppressing the AKT/GSK3β/β-catenin pathway creates opportunities for targeted interventions. Researchers could develop small molecules or peptides that:

  • Mimic St7l's interaction with AKT, thereby inhibiting this oncogenic signaling pathway

  • Stabilize St7l protein against degradation

  • Enhance St7l's binding to its downstream effectors

MicroRNA-Based Therapeutics:
Since microRNAs like miR-23b can regulate ST7L expression (based on human studies) , anti-miRNA therapeutics could be developed to:

  • Block miRNAs that downregulate St7l

  • Deliver modified miRNAs that increase St7l expression

  • Target the specific miRNA-mRNA interaction sites on St7l transcripts

Gene Therapy Approaches:

  • Viral vector delivery: Adeno-associated virus (AAV) or lentiviral vectors could deliver functional St7l to tumors deficient in this tumor suppressor

  • mRNA therapeutics: Encapsulated St7l mRNA could provide transient expression in target tissues

  • CRISPR-based approaches: CRISPR activation systems could upregulate endogenous St7l expression

Biomarker Development:
St7l status could serve as a prognostic or predictive biomarker to:

  • Stratify patients for clinical trials

  • Monitor treatment response

  • Detect early recurrence based on circulating tumor DNA analysis of St7l mutations or methylation status

Combination Therapy Strategies:
Understanding synthetic lethal interactions with St7l deficiency could identify:

  • Existing drugs that selectively target cells with low St7l expression

  • Novel combination therapies that exploit vulnerabilities created by St7l loss

  • Immunotherapeutic approaches that might be particularly effective in tumors with St7l alterations

Translational Research Roadmap:

  • Preclinical validation: Establish reliable rat models that accurately recapitulate human ST7L biology

  • Biomarker qualification: Develop and validate assays for measuring St7l status in clinical samples

  • Lead compound identification: Screen for molecules that enhance St7l activity or target vulnerabilities created by St7l loss

  • Pharmacological optimization: Improve drug-like properties of lead compounds

  • Early-phase clinical trial design: Develop innovative trial designs that incorporate St7l biomarkers

By pursuing these translational approaches, research on St7l could contribute significantly to the development of novel targeted cancer therapeutics with potential applications across multiple cancer types where this tumor suppressor plays a role.

What consensus has emerged regarding the fundamental importance of St7l in cancer biology?

Current research has established several consensus points regarding St7l's fundamental importance in cancer biology, though many areas remain active fields of investigation. The emerging consensus centers around St7l's role as a genuine tumor suppressor gene with mechanistic connections to established cancer pathways.

St7l has been recognized as part of a family of tumor suppressor genes that includes ST7, with both sharing significant structural and functional homology . The consensus view holds that St7l functions primarily through inhibition of pro-oncogenic signaling pathways, particularly the β-catenin pathway and the AKT/GSK3β/β-catenin axis . This mechanism places St7l at a critical junction in cellular signaling networks that regulate cell proliferation, survival, and metastatic potential.

The sensitivity of St7l expression to environmental chemicals like 1,2-dibromoethane and 1,2-dimethylhydrazine has established consensus regarding its potential role in environmentally-induced carcinogenesis. This suggests St7l may serve as an important mediator between environmental exposures and cancer development.

There is also emerging agreement that St7l expression and function are regulated at multiple levels, including transcriptional control, post-transcriptional regulation by microRNAs (as demonstrated with miR-23b in human studies) , and potentially through protein-protein interactions that affect its stability and activity.

Despite these areas of consensus, significant knowledge gaps remain regarding tissue-specific functions, the distinct roles of different splice variants, and the complete spectrum of cancer types where St7l plays a critical role. Continued research using the methodologies outlined throughout this FAQ will be essential to strengthen and expand this consensus, ultimately translating these findings into clinical applications that benefit cancer patients.

How should researchers approach St7l studies to maximize their contribution to the field?

To maximize contributions to the field, researchers approaching St7l studies should adopt a comprehensive, multidisciplinary strategy that builds upon existing knowledge while addressing critical gaps:

Experimental Design Principles:

  • Physiological relevance: Prioritize models that closely mimic natural St7l expression and regulation. Avoid extreme overexpression systems that may create artificial phenotypes.

  • Isoform specificity: Clearly define which St7l splice variants are being studied, as different isoforms may have distinct functions . Design experiments to compare these isoforms directly.

  • Contextual considerations: Evaluate St7l function across multiple cell types and tissue contexts, recognizing that its tumor suppressive effects may be context-dependent.

  • Technical rigor: Implement appropriate controls, sufficient biological replicates, and complementary methodologies to validate key findings.

Strategic Research Priorities:

  • Mechanistic depth over phenomenological breadth: Focus on elucidating detailed molecular mechanisms rather than simply documenting effects across numerous models.

  • Integration with established cancer pathways: Position St7l research within the broader context of cancer signaling networks, particularly the AKT/GSK3β/β-catenin pathway .

  • Translational potential: Design studies with clear paths toward clinical application, whether through biomarker development or therapeutic targeting.

  • Data sharing and collaboration: Contribute to community resources by sharing datasets, reagents, and methodological innovations.

Methodological Approaches:

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