Recombinant Rat Transmembrane protein 216 (Tmem216)

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Description

Introduction to Recombinant Rat Tmem216

Recombinant Rat Transmembrane protein 216 (Tmem216) is a laboratory-produced version of the naturally occurring Tmem216 protein found in Rattus norvegicus. This protein is part of the tetraspan transmembrane protein family and is primarily localized in the ciliary transition zone. The recombinant form is synthesized through various expression systems to enable detailed scientific study and applications . Mutations in the TMEM216 gene have been linked to serious human disorders, including Joubert syndrome and Meckel syndrome, which involve photoreceptor degeneration among other pathologies .

The full-length rat Tmem216 protein consists of 141 amino acids forming a transmembrane structure with multiple membrane-spanning domains. The protein sequence is: MAPRDKRLSSTPLEILFFLNGWYYATYFLLELLIFLYKGLLLPYPTANLVLDVVMLLLYLGIEVIRLFFGTKGNLCQRKMPLGISVALTFPSAMMASYYLLLQTYVLRLEAIMNSILLFFCGSELLLEMLTLATFSSMDRI . This sequence determines the protein's structure and function, enabling its role in ciliary transitions and cellular signaling.

Protein Identification and Classification

Recombinant Rat Tmem216 is identified through several standard database references that enable consistent identification across research platforms:

CharacteristicIdentifierReference
UniProt IDB6ID01
Gene ID361727
mRNA RefSeqNM_001271039.1
Protein RefSeqNP_001257968.1
Official SymbolTMEM216

The protein belongs to a family of transmembrane proteins that span the cellular membrane multiple times. As a tetraspan protein, Tmem216 traverses the cell membrane four times, creating both intracellular and extracellular domains that facilitate its function in the ciliary transition zone .

Expression Systems

Recombinant Rat Tmem216 can be produced through various expression systems, each offering different advantages for protein quality, yield, and post-translational modifications:

Expression SystemCharacteristicsProduct FormReference
Mammalian CellsHigher likelihood of proper folding and post-translational modificationsLiquid or lyophilized powder
E. coliHigher yield, cost-effective, may lack some modificationsTypically in solution

The choice of expression system depends on the specific research requirements, with mammalian cell-derived proteins often preferred for functional studies due to their closer resemblance to the naturally occurring protein.

Stability and Handling Precautions

Liquid forms typically maintain stability for approximately 6 months at -20°C/-80°C, while lyophilized forms can remain stable for up to 12 months at the same temperatures . To maintain protein integrity, repeated freeze-thaw cycles should be avoided, as they can lead to protein denaturation and loss of activity . For reconstitution of lyophilized proteins, manufacturers often provide specific buffer recommendations to ensure optimal protein stability and function.

Tissue Expression

Research on Tmem216 expression patterns reveals its presence in multiple rat tissues:

Tissue/OrganExpressionReference
Eye (retina)Present in all cell layers of neural retina
BrainDetected
PronephrosPresent
LiverPresent
IntestinePresent
Skeletal MuscleDetected

Within the retina specifically, Tmem216 expression has been observed in the outer nuclear layer, inner nuclear layer, and ganglion cell layer, suggesting important functions throughout the visual system . Expression begins early in development and continues into adulthood, indicating roles in both developmental processes and tissue maintenance.

Cellular Function

Tmem216 functions primarily as a component of the ciliary transition zone, which serves as a gateway controlling protein entry and exit from the cilium. Studies using knockout models have demonstrated several critical functions:

  1. Regulation of photoreceptor outer segment formation and maintenance

  2. Control of protein transport within ciliated cells

  3. Support of normal disc morphology in photoreceptor outer segments

  4. Maintenance of ciliary axoneme structure

These functions highlight Tmem216's role as a crucial regulator of ciliary structure and function, particularly in specialized cells like photoreceptors.

Role in Photoreceptor Function

Research using zebrafish models with TMEM216 deletion has provided significant insights into the protein's function in photoreceptors. Knockout of tmem216 results in:

  1. Reduced immunoreactivity to rod photoreceptor outer segment markers

  2. Decreased immunoreactivity to cone photoreceptor outer segment markers

  3. Increased cell death (TUNEL-positive nuclei) in photoreceptors

  4. Shortened photoreceptor ciliary axonemes

  5. Mislocalization of outer segment proteins (rhodopsin, GNAT2, red opsin)

  6. Abnormal disc morphology in photoreceptor outer segments, including shortened discs and vesicles/vacuoles

These findings demonstrate that Tmem216 is essential for normal photoreceptor development, function, and survival.

Disease Association

Mutations in the human TMEM216 gene are associated with two related disorders:

  1. Joubert Syndrome: A genetic disorder characterized by retinal dystrophy, cerebellar ataxia, oculomotor apraxia, hypotonia, neonatal breathing abnormalities, psychomotor delay, and renal disease. Neuroimaging reveals the diagnostic "molar tooth sign" resulting from cerebellar vermis abnormalities .

  2. Meckel Syndrome: A more severe disorder often resulting in embryonic or perinatal lethality, with additional manifestations including occipital encephalocele, polycystic kidneys, polydactyly, and liver fibrosis .

The investigation of Recombinant Rat Tmem216 provides a valuable tool for understanding the molecular mechanisms underlying these disorders and potentially developing therapeutic approaches.

Product Specs

Form
Lyophilized powder
Note: We prioritize shipping the format we currently have in stock. However, if you have specific format requirements, please indicate them when placing your order, and we will fulfill your request.
Lead Time
Delivery time may vary depending on the purchase method and location. Please consult your local distributors for specific delivery details.
Note: All our proteins are shipped with standard blue ice packs by default. If dry ice shipment is required, please inform us in advance, as additional fees will apply.
Notes
Repeated freezing and thawing is not recommended. Store working aliquots at 4°C for up to one week.
Reconstitution
We recommend centrifuging the vial briefly before opening to ensure the contents settle at the bottom. Reconstitute the protein in deionized sterile water to a concentration of 0.1-1.0 mg/mL. We recommend adding 5-50% glycerol (final concentration) and aliquoting for long-term storage at -20°C/-80°C. Our default final glycerol concentration is 50%, which can serve as a reference.
Shelf Life
Shelf life is influenced by various factors, including storage conditions, buffer ingredients, storage temperature, and the protein's inherent stability.
Generally, the shelf life of liquid form is 6 months at -20°C/-80°C. The shelf life of lyophilized form is 12 months at -20°C/-80°C.
Storage Condition
Upon receipt, store at -20°C/-80°C. Aliquoting is necessary for multiple uses. Avoid repeated freeze-thaw cycles.
Tag Info
Tag type will be determined during the manufacturing process.
The tag type is determined during the production process. If you have a specific tag type in mind, please inform us, and we will prioritize developing it for you.
Synonyms
Tmem216; Transmembrane protein 216
Buffer Before Lyophilization
Tris/PBS-based buffer, 6% Trehalose.
Datasheet
Please contact us to get it.
Expression Region
1-141
Protein Length
Full length protein
Species
Rattus norvegicus (Rat)
Target Names
Tmem216
Target Protein Sequence
MAPRDKRLSSTPLEILFFLNGWYYATYFLLELLIFLYKGLLLPYPTANLVLDVVMLLLYL GIEVIRLFFGTKGNLCQRKMPLGISVALTFPSAMMASYYLLLQTYVLRLEAIMNSILLFF CGSELLLEMLTLATFSSMDRI
Uniprot No.

Target Background

Function
Transmembrane protein 216 (Tmem216) is a component of the tectonic-like complex, which is essential for tissue-specific ciliogenesis and may regulate ciliary membrane composition.
Database Links

KEGG: rno:361727

STRING: 10116.ENSRNOP00000028079

UniGene: Rn.854

Subcellular Location
Membrane; Multi-pass membrane protein. Cytoplasm, cytoskeleton, cilium basal body.

Q&A

What experimental approaches are used to characterize the structural integrity of recombinant rat Tmem216?

Recombinant rat Tmem216’s structural validation requires a multi-modal workflow. For the full-length protein expressed in E. coli (CSB-CF023810RA), SDS-PAGE analysis confirms a band at ~19 kDa, consistent with its predicted 141-amino acid sequence . N-terminal 10xHis tags enable purification via immobilized metal affinity chromatography (IMAC), with >85% purity confirmed by Coomassie staining . Circular dichroism (CD) spectroscopy is recommended to assess secondary structure integrity after reconstitution from lyophilized forms . Discrepancies between predicted and observed molecular weights may arise from post-translational modifications or detergent interactions during transmembrane domain solubilization .

Table 1: Structural validation benchmarks

ParameterE. coli-expressed Yeast-expressed (partial)
Molecular Weight19 kDa (SDS-PAGE)Variable (partial sequence)
Purity>85% (SDS-PAGE)>85% (SDS-PAGE)
Tag SystemN-terminal 10xHisUndetermined during production
Stability6 months (-80°C, liquid)12 months (-80°C, lyophilized)

How do expression systems impact functional studies of recombinant Tmem216?

  • Cilia docking assays: Full-length Tmem216 restores ciliogenesis in Tmem216 / − fibroblasts .

  • Co-immunoprecipitation (Co-IP): E. coli-derived Tmem216 binds Meckelin in pull-down assays, confirming interaction fidelity .
    Contradictions in subcellular localization (e.g., basal body vs. cytosolic) often stem from tag placement or detergent extraction protocols .

What methodologies resolve stability challenges during long-term Tmem216 storage?

Recombinant Tmem216 degradation is mitigated through:

  • Lyophilization: Increases shelf life to 12 months at -80°C vs. 6 months for liquid formats .

  • Glycerol supplementation: 50% glycerol prevents aggregation during freeze-thaw cycles .

  • Activity monitoring: Centrosomal docking capacity declines after >3 freeze-thaw cycles, necessitating single-use aliquots . Functional assays (e.g., RhoA activation in siRNA-treated IMCD3 cells) should precede critical experiments .

How do researchers validate Tmem216’s role in ciliogenesis using loss-of-function models?

Three orthogonal methods are employed:

  • siRNA knockdown: Two independent siRNA duplexes reduce ciliation rates from 78% to <12% in IMCD3 cells (χ², p<0.001) .

  • Fibroblast assays: TMEM216 p.R85X mutant fibroblasts show absent cilia after 48-hour serum starvation .

  • Rescue experiments: Recombinant Tmem216 restores centrosomal docking in 64% of transfected cells . Key controls include scrambled siRNA and Meckelin co-transfection to rule off-target effects .

What advanced techniques map Tmem216-Meckelin interactions in ciliary signaling?

The complex is characterized via:

  • Bimolecular fluorescence complementation (BiFC): GFP-tagged Tmem216 colocalizes with Meckelin at basal bodies .

  • Phosphoproteomics: TMEM216 loss increases Dishevelled-1 phosphorylation (1.8-fold; p=0.007), quantified by Phos-tag™ gels .

  • RhoA biosensors: FRET-based reporters confirm hyperactivation (ΔF/F₀=0.42) upon Tmem216 knockdown, reversible with Rho inhibitor Y-27632 .

How are conflicting localization results for Tmem216 reconciled across studies?

Discrepancies arise from antibody specificity or fixation artifacts. Solutions include:

  • Antibody validation: Anti-TMEM216 (aa 81–90) shows no signal in p.R85X mutants .

  • Detergent screening: 0.2% Triton X-100 preserves membrane association better than digitonin .

  • Live-cell imaging: GFP-TMEM216 localizes to transition zones in 89% of ciliated hRPE cells .

Table 2: Localization patterns under varying conditions

ConditionLocalization SiteStudy Model
Standard fixationCytosolicMutant fibroblasts
Triton X-100 extractionBasal bodyIMCD3 cells
Live imagingCiliary transition zonehRPE cells

What in vivo models best recapitulate Tmem216-related pathologies?

Zebrafish (Danio rerio) tmem216 / − mutants exhibit:

  • Photoreceptor degeneration: 43% reduction in GNAT2+ outer segments by 14 dpf .

  • Axoneme defects: Acetylated tubulin staining shows 62% shorter ciliary axonemes vs. wild type .

  • Premature lethality: 100% mortality by 21 dpf, necessitating embryonic analyses .

How do researchers address contradictory RhoA/Dishevelled activation data in Tmem216 models?

Two hypotheses are tested:

  • Feedback dysregulation: Rho inhibition with Y-27632 reduces Dishevelled phosphorylation by 55% .

  • Cell type specificity: Retinal pigment epithelial cells show stronger RhoA activation (2.1-fold) than fibroblasts .
    Standardizing serum starvation durations (48 hours) and using isogenic cell lines minimizes variability .

What controls distinguish genuine Tmem216 loss-of-function phenotypes from experimental artefacts?

Essential controls include:

  • Rescue with recombinant protein: Reverses ciliogenesis defects in ≥60% of cells .

  • Multi-species validation: Murine Tmem216 / − models replicate zebrafish photoreceptor defects .

  • Off-target screening: Two independent siRNA duplexes must produce concordant phenotypes .

Which proteomic strategies identify novel Tmem216 interactors in ciliary complexes?

Recommended workflows:

  • Affinity purification-MS (AP-MS): GFP-Trap® assays identify 14 interactors, including Meckelin and CEP290 .

  • BioID proximity labeling: TurboID-TMEM216 fusion tags label transition zone proteins in living cells .

  • Crosslinking MS: DSS-treated cilia membranes preserve weak interactions like Tmem216-RPGRIP1L .

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