Recombinant Rhodopirellula baltica UvrABC system protein B (uvrB), partial

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Description

Molecular Context and Functional Role

UvrABC System Overview
The UvrABC endonuclease complex is a conserved bacterial DNA repair system comprising three subunits:

  • UvrA: ATPase responsible for lesion recognition

  • UvrB: Helicase that unwinds DNA and verifies damage

  • UvrC: Endonuclease that cleaves damaged strands

In Rhodopirellula baltica, the recombinant UvrB fragment retains partial functionality, enabling studies on its interaction with UvrA and damaged DNA substrates. This system is critical for maintaining genomic integrity under oxidative stress, as demonstrated in related species like Mycobacterium tuberculosis .

Research Applications

  • Mechanistic Studies: Used to dissect the NER pathway in understudied Planctomycetes .

  • Biotechnological Tools: Serves as a template for engineering thermostable DNA repair enzymes.

  • Antimicrobial Targets: Inhibition of UvrB could sensitize bacteria to DNA-damaging agents .

Genomic and Ecological Context

Rhodopirellula baltica’s genome encodes 7,325 genes, many involved in polysaccharide degradation and environmental adaptation . While UvrB is not directly linked to these pathways, its role in stress resistance highlights the organism’s survival strategies in marine ecosystems.

Product Specs

Form
Lyophilized powder
Note: We will prioritize shipping the format currently in stock. However, if you have any specific requirements for the format, please specify your preference when placing the order. We will prepare the product according to your request.
Lead Time
Delivery time may vary depending on the purchasing method or location. Please consult your local distributors for specific delivery time estimates.
Note: All of our proteins are shipped with standard blue ice packs. If you require dry ice shipping, please inform us in advance as additional fees will apply.
Notes
Repeated freezing and thawing is not recommended. Store working aliquots at 4°C for up to one week.
Reconstitution
We recommend centrifuging the vial briefly before opening to ensure the contents settle at the bottom. Please reconstitute the protein in deionized sterile water to a concentration of 0.1-1.0 mg/mL. We recommend adding 5-50% glycerol (final concentration) and aliquoting for long-term storage at -20°C/-80°C. Our default final glycerol concentration is 50%. Customers can use this as a reference.
Shelf Life
Shelf life depends on various factors, including storage conditions, buffer composition, temperature, and the protein's inherent stability.
Generally, the shelf life of liquid form is 6 months at -20°C/-80°C. The shelf life of lyophilized form is 12 months at -20°C/-80°C.
Storage Condition
Store at -20°C/-80°C upon receipt. Aliquoting is necessary for multiple uses. Avoid repeated freeze-thaw cycles.
Tag Info
The tag type will be determined during the manufacturing process.
If you have a specific tag type requirement, please inform us and we will prioritize developing the specified tag.
Synonyms
uvrB; RB8397; UvrABC system protein B; Protein UvrB; Excinuclease ABC subunit B
Buffer Before Lyophilization
Tris/PBS-based buffer, 6% Trehalose.
Datasheet
Please contact us to get it.
Protein Length
Partial
Purity
>85% (SDS-PAGE)
Species
Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1)
Target Names
uvrB
Uniprot No.

Target Background

Function
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of two UvrA and two UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. This DNA wrapping is dependent on ATP binding by UvrB and likely results in local melting of the DNA helix, facilitating the insertion of the UvrB beta-hairpin between the DNA strands. Subsequently, UvrB probes one DNA strand for the presence of a lesion. If a lesion is detected, the UvrA subunits dissociate, forming a UvrB-DNA preincision complex. This complex then binds UvrC, releasing the second UvrB subunit. If no lesion is found, the DNA wraps around the other UvrB subunit, which will then check the opposite strand for damage.
Database Links

KEGG: rba:RB8397

STRING: 243090.RB8397

Protein Families
UvrB family
Subcellular Location
Cytoplasm.

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