Recombinant Staphylococcus epidermidis Probable quinol oxidase subunit 4 (qoxD)

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Description

Biochemical Characteristics and Production

Recombinant qoxD is produced via heterologous expression in Escherichia coli, typically fused with an N-terminal His-tag for purification. Key specifications include:

ParameterDetails
SpeciesStaphylococcus epidermidis (strain ATCC 12228)
SourceRecombinant expression in E. coli
TagHis-tag (N-terminal)
Protein LengthFull-length mature protein (20–374 amino acids)
FormLyophilized powder in Tris/PBS-based buffer with 6% trehalose, pH 8.0
Purity>90% as determined by SDS-PAGE
Storage-20°C/-80°C (long-term), 4°C (short-term working aliquots)

The amino acid sequence (Q8CPP9) includes conserved motifs for quinol binding and electron transfer, aligning with its role in the cytochrome bc1 complex or terminal oxidases .

Functional Role in S. epidermidis Metabolism

Quinol oxidases catalyze the oxidation of quinols to quinones, transferring electrons to oxygen in the bacterial electron transport chain (ETC). In S. epidermidis, this process is regulated by transcription factors like SrrAB, which modulates genes involved in cytochrome and quinol-oxidase assembly under microaerobic conditions .

Key Functions of Quinol Oxidase Complexes

  • Energy Production: Generates ATP via proton translocation during electron transfer.

  • Oxygen Tolerance: Enables survival under varying oxygen levels, critical for biofilm formation and host colonization.

  • Redox Balance: Maintains intracellular redox states to prevent oxidative stress.

While qoxD specifically is not extensively studied, related subunits (e.g., qoxA, qoxB) are implicated in:

  • Electron Transport Efficiency: Regulated by SrrAB under microaerobic conditions .

  • Biofilm Formation: Downregulation of qoxB in srrA mutants correlates with reduced polysaccharide intercellular adhesion (PIA) and adherence .

Research Applications and Experimental Insights

Recombinant qoxD is primarily used in:

Immunoassays (e.g., ELISA)

  • Antibody Detection: ELISA kits incorporating recombinant qoxD enable detection of anti-S. epidermidis antibodies, aiding in studies of host-pathogen interactions .

  • Protein Interaction Studies: His-tagged qoxD facilitates purification for co-immunoprecipitation or surface plasmon resonance assays to map binding partners.

Genomic and Evolutionary Context

S. epidermidis genomes exhibit open pan-genomes with frequent horizontal gene transfer (HGT), enabling acquisition of virulence and antibiotic resistance genes . While qoxD is not directly linked to pathogenicity, its regulation by SrrAB suggests a role in adapting to host niches:

TraitRelevance to qoxD
Biofilm FormationSrrAB-mediated downregulation of qoxB reduces PIA synthesis and adherence .
Antibiotic ResistanceHGT of SCCmec and CRISPR-Cas systems may influence quinol oxidase expression .
Host ColonizationQuinol oxidase activity supports survival in low-oxygen environments (e.g., skin, wounds) .

Comparative Analysis with Other Quinol Oxidase Subunits

While qoxD is less characterized, its homologs in S. epidermidis include:

SubunitGeneFunctionRegulationPathogenic Relevance
qoxAqoxACore subunit of quinol oxidase complex SrrAB-dependent Biofilm formation
qoxBqoxBAssembly of cytochrome bc1 complex SrrAB-dependent Anaerobic metabolism
qoxDqoxDProbable ancillary subunit in electron transfer UnknownUnder investigation

Challenges and Future Directions

  • Limited Functional Data: Direct studies on qoxD are sparse; inferences rely on homologs like qoxA/B.

  • Pathogenicity Links: No direct evidence ties qoxD to virulence, but its role in ETC efficiency may indirectly support persistence in host niches .

  • Therapeutic Targets: Inhibiting quinol oxidase could disrupt metabolic flexibility, though off-target effects in commensal S. epidermidis pose challenges .

Product Specs

Form
Lyophilized powder
Note: While we prioritize shipping the format currently in stock, we accommodate special requirements. Please specify your preferred format when placing your order, and we will prepare accordingly.
Lead Time
Delivery time may vary depending on the purchasing method and location. Please contact your local distributor for specific delivery details.
Note: All proteins are shipped with standard blue ice packs. If dry ice shipping is required, please inform us in advance as additional fees will apply.
Notes
Repeated freezing and thawing is not recommended. Store working aliquots at 4°C for up to one week.
Reconstitution
We recommend centrifuging the vial briefly before opening to ensure the contents are settled at the bottom. Reconstitute the protein in deionized sterile water to a concentration of 0.1-1.0 mg/mL. For long-term storage, we recommend adding 5-50% glycerol (final concentration) and aliquoting at -20°C/-80°C. Our default final glycerol concentration is 50%, which can be used as a reference.
Shelf Life
Shelf life is influenced by various factors, including storage conditions, buffer composition, temperature, and the inherent stability of the protein itself. Generally, liquid forms have a shelf life of 6 months at -20°C/-80°C, while lyophilized forms have a shelf life of 12 months at -20°C/-80°C.
Storage Condition
Upon receipt, store at -20°C/-80°C. Aliquoting is necessary for multiple uses. Avoid repeated freeze-thaw cycles.
Tag Info
Tag type will be determined during the manufacturing process.
The tag type will be determined during production. If you have a specific tag type in mind, please inform us, and we will prioritize developing it accordingly.
Synonyms
qoxD; SERP0643; Probable quinol oxidase subunit 4; Quinol oxidase polypeptide IV
Buffer Before Lyophilization
Tris/PBS-based buffer, 6% Trehalose.
Datasheet
Please contact us to get it.
Expression Region
1-96
Protein Length
full length protein
Species
Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
Target Names
qoxD
Target Protein Sequence
MNTIVKHTVGFIASIVLTLLAVFVTLYTNMTFHAKVTIIFGFAFIQAALQLLMFMHLTEG KDGRLQSFKVIFAIIITLVTVIGTYWVMQGGHSSHL
Uniprot No.

Target Background

Function
Catalyzes the oxidation of quinol, accompanied by the reduction of oxygen to water.
Database Links
Protein Families
Cytochrome c oxidase bacterial subunit 4 family
Subcellular Location
Cell membrane; Multi-pass membrane protein.

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