Recombinant Tetraodon nigroviridis Glutamyl-tRNA (Gln) amidotransferase subunit C, mitochondrial (gatc)

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Description

Introduction to Glutamyl-tRNA (Gln) Amidotransferase Subunit C

The Recombinant Tetraodon nigroviridis Glutamyl-tRNA (Gln) amidotransferase subunit C, mitochondrial (gatc) is part of a crucial enzyme complex involved in the biosynthesis of glutaminyl-tRNA(Gln) in mitochondria. This process is essential for mitochondrial protein synthesis, as it ensures the correct charging of tRNA(Gln) with glutamine. The enzyme complex, known as GatCAB, consists of three subunits: GatA, GatB, and GatC, with GatC being the focus of this discussion.

Function and Importance of GatC

GatC, encoded by the GATC gene, plays a pivotal role in the indirect pathway of glutaminyl-tRNA(Gln) biosynthesis. In this pathway, mitochondrial glutamyl-tRNA synthetase first misaminoacylates tRNA(Gln) with glutamic acid, forming Glu-tRNA(Gln). The GatCAB complex then catalyzes the transamidation of Glu-tRNA(Gln) to Gln-tRNA(Gln), using free glutamine as an amide donor .

Key Functions:

  • Transamidation Reaction: GatCAB complex facilitates the conversion of Glu-tRNA(Gln) to Gln-tRNA(Gln).

  • Mitochondrial Localization: GatC is localized in the mitochondria, where it interacts with other subunits to form the functional GatCAB enzyme .

  • Disease Association: Mutations in GATC and other GatCAB subunits have been linked to severe mitochondrial disorders, such as combined oxidative phosphorylation deficiencies and lethal cardiomyopathies .

3.1. Biochemical Studies

  • Reconstitution of GatCAB Activity: Studies have successfully reconstituted the GatCAB complex in vitro, demonstrating its ability to convert Glu-tRNA(Gln) to Gln-tRNA(Gln) using recombinant subunits .

  • Subcellular Localization: Experiments using EGFP-tagged proteins have confirmed that all GatCAB subunits, including GatC, are localized in mitochondria .

3.2. Disease Implications

  • Mitochondrial Disorders: Pathogenic variants in GATC and other GatCAB subunits lead to impaired mitochondrial protein synthesis and severe metabolic disorders .

  • Respiratory Chain Deficiencies: Defects in GatCAB function result in combined respiratory chain enzyme deficiencies, highlighting the critical role of this complex in maintaining mitochondrial function .

Table 1: Key Features of GatCAB Subunits

SubunitGeneFunctionLocalization
GatAQRSL1Amidotransferase activityMitochondria
GatBGATBAmidotransferase activityMitochondria
GatCGATCAmidotransferase activityMitochondria

Table 2: Disease Associations

DiseaseAssociated GenesSymptoms
Combined Oxidative Phosphorylation DeficiencyGATC, GATB, QRSL1Metabolic disorders, cardiomyopathy
Lethal Mitochondrial CardiomyopathyGATC, GATB, QRSL1Severe metabolic defects, early mortality

References GeneCards. GATC Gene. Biogenesis of glutaminyl-mt tRNAGln in human mitochondria. Pathogenic variants in glutamyl-tRNAGln amidotransferase subunits cause a lethal mitochondrial cardiomyopathy disorder. Dual-targeted tRNA-dependent amidotransferase ensures both mitochondrial and chloroplastic Gln-tRNAGln synthesis in plants. Glu-tRNAGln amidotransferase: A novel heterotrimeric enzyme. Gregarine single-cell transcriptomics reveals differential mitochondrial remodeling and adaptation in apicomplexans. Glutamyl-tRNAGln amidotransferase is essential for mammalian mitochondria. Synthesis and preliminary studies of 11C-labeled tetrahydro-1,7-naphthyridine-2-carboxamides for PET imaging of metabotropic glutamate receptor 2.

Product Specs

Form
Lyophilized powder
Note: While we prioritize shipping the format currently in stock, please specify your format preference during order placement for customized preparation.
Lead Time
Delivery times vary depending on the purchasing method and location. Please contact your local distributor for precise delivery estimates.
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Notes
Avoid repeated freeze-thaw cycles. Store working aliquots at 4°C for up to one week.
Reconstitution
Centrifuge the vial briefly before opening to consolidate the contents. Reconstitute the protein in sterile, deionized water to a concentration of 0.1-1.0 mg/mL. For long-term storage, we recommend adding 5-50% glycerol (final concentration) and aliquoting at -20°C/-80°C. Our standard glycerol concentration is 50%, which may serve as a guideline for customers.
Shelf Life
Shelf life depends on various factors, including storage conditions, buffer composition, temperature, and protein stability. Generally, liquid formulations have a 6-month shelf life at -20°C/-80°C, while lyophilized formulations have a 12-month shelf life at -20°C/-80°C.
Storage Condition
Upon receipt, store at -20°C/-80°C. Aliquoting is essential for multiple uses. Avoid repeated freeze-thaw cycles.
Tag Info
Tag type is determined during manufacturing.
The tag type will be determined during the production process. If you require a specific tag type, please inform us, and we will prioritize its development.
Synonyms
gatc; GSTENG00029516001; Glutamyl-tRNA(Gln) amidotransferase subunit C; mitochondrial; Glu-AdT subunit C; EC 6.3.5.-
Buffer Before Lyophilization
Tris/PBS-based buffer, 6% Trehalose.
Datasheet
Please contact us to get it.
Expression Region
12-188
Protein Length
Full Length of Mature Protein
Purity
>85% (SDS-PAGE)
Species
Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon nigroviridis)
Target Names
gatc
Target Protein Sequence
LSWCYASRL THQGTSVTSG EGSPGTRTSR VPARVLNLTR PLSCRAYNSK VPQSPTWEPV SEDLLPPCAQ FPADLVDKLE RLALVDFRTK QGLECLEKAI RFADQLHVVD TSGVEPMDSV LEDRVLYLRE DEEKEGDCAE ELLQLSRNTC EEYYVAPPGN IPLPTREKRA AMLKHSEF
Uniprot No.

Target Background

Function
This protein facilitates the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) within the mitochondria. This reaction occurs in the presence of glutamine and ATP, utilizing an activated gamma-phospho-Glu-tRNA(Gln) intermediate.
Database Links
Protein Families
GatC family
Subcellular Location
Mitochondrion.

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