ostd-1 Antibody

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Product Specs

Buffer
Preservative: 0.03% ProClin 300; Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
14-16 weeks (Made-to-order)
Synonyms
ostd-1 antibody; M01A10.3 antibody; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 antibody; Oligosaccharyl transferase delta subunit antibody; Ribophorin II antibody; RPN-II antibody; Ribophorin-2 antibody
Target Names
ostd-1
Uniprot No.

Target Background

Function
This antibody targets a subunit of the oligosaccharyltransferase (OST) complex. The OST complex catalyzes the initial transfer of a defined glycan (Glc3Man9GlcNAc2 in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains. This is the first step in protein N-glycosylation, a cotranslational process. The OST complex associates with the Sec61 complex at the translocon, mediating protein translocation across the endoplasmic reticulum (ER). All subunits are essential for optimal enzyme activity.
Gene References Into Functions
OSTD-1 contributes to maintaining the dynamic morphology of the ER throughout the cell cycle. [PMID: 24130834](https://www.ncbi.nlm.nih.gov/pubmed/24130834)
Database Links
Protein Families
SWP1 family
Subcellular Location
Endoplasmic reticulum membrane; Multi-pass membrane protein.

Q&A

What is the PD-1 pathway and how does it function in immune regulation?

PD-1 (Programmed Death-1, also known as CD279) is a coinhibitory receptor expressed on the surface of activated T cells and B cells that plays a critical role in immune tolerance. PD-1 primarily functions by interacting with its ligands PD-L1 and PD-L2, with PD-L1 being widely distributed on diverse cell types while PD-L2 is mainly expressed on dendritic cells and some macrophages . Once activated through ligand binding, PD-1 exerts negative regulatory effects on immune responses by dephosphorylating key downstream proteins of the antigen receptor . The immediate outcome of PD-1 engagement is inhibition of cell growth and cytokine secretion in immune cells .

At the molecular level, PD-1 contains an immunoreceptor tyrosine-based inhibitory motif (ITIM) and an immunoreceptor tyrosine switch motif (ITSM) in its cytoplasmic tail, which are essential for its inhibitory function . PD-1 signaling interferes with T cell receptor/CD28 signals, suppressing immune responses through the PD-1/SHP-2/p-STAT1/T-bet axis in the tumor microenvironment . This pathway serves as a critical regulator for both the induction and maintenance of peripheral immune tolerance .

How do PD-1 antibodies enhance anti-tumor immune responses?

PD-1 antibodies function by blocking the interaction between PD-1 and its ligands (PD-L1/PD-L2), thereby preventing the inhibitory signals that normally suppress T cell activity. This blockade effectively releases the "brakes" on the immune system, allowing for enhanced anti-tumor immune responses through several mechanisms:

First, PD-1 blockade increases the functional capacity of T cells, as demonstrated by significantly increased expression of intracellular IFN-γ in adoptively transferred T cells following anti-PD-1 treatment compared to isotype control-treated mice . Studies have shown that markers of activation and proliferation are increased in target-specific T cells in the presence of anti-PD-1 antibody .

Second, PD-1 blockade enhances T-cell migration to tumors by elevating IFN-γ inducible chemokines, which augments T-cell-mediated antitumor responses . This facilitates better infiltration of the tumor microenvironment by immune effector cells.

What is the relationship between PD-L1 expression and response to PD-1 antibody therapy?

The relationship between PD-L1 expression and response to PD-1 antibody therapy is complex but clinically significant. Multiple studies have reported a correlation between PD-L1 expression on tumor cells and objective responses to anti-PD-1 therapy . In clinical trials using fully human IgG4 PD-1 monoclonal antibody (BMS-936558), a significant correlation was observed between the level of PD-L1 expression on tumor cells and objective responses in patients .

The question of whether PD-L1 expression on tumor cells is critical for therapeutic effects requires further investigation. While significant correlations have been observed between PD-L1 expression and clinical response, the predictive value of PD-L1 as a biomarker is not absolute, suggesting that additional factors influence response to therapy .

How does PD-1 blockade affect T cell metabolism and function in the tumor microenvironment?

PD-1 signaling profoundly alters T cell metabolic programming, which directly impacts their functional capacity in the tumor microenvironment. Research has revealed that PD-1 engagement inhibits glycolysis while promoting lipolysis and fatty acid oxidation in T cells . This metabolic reprogramming represents a fundamental mechanism by which PD-1 mediates blockade of T cell effector function .

At the molecular level, PD-1 activation coordinates the upregulation of transcription factor ATF-like (BATF), which is sufficient to impair T cell proliferation and cytokine secretion . Studies have demonstrated that silencing BATF in T cells reduced PD-1 inhibition and rescued specific T cell function in contexts such as HIV infection . Additionally, PD-1 signaling inhibits T cell expansion and function by upregulating IL-10 production .

In the tumor microenvironment specifically, PD-1 is frequently upregulated on dysfunctional tumor antigen-specific CD8+ T cells both in vitro and in vivo . These TILs (tumor-infiltrating lymphocytes) expressing high levels of PD-1 exhibit an "exhausted" phenotype characterized by decreased proliferation and impaired antitumor immune responses . PD-1 blockade can reverse this exhausted state, enhancing tumor antigen-specific T cell responses and inhibiting tumor growth or inducing partial tumor regression .

What are the mechanisms behind combination therapy approaches using PD-1 antibodies with other immunotherapies?

Combination therapy approaches using PD-1 antibodies with other immunotherapies leverage complementary mechanisms to overcome the multifaceted immunosuppression in the tumor microenvironment. One well-studied combination is PD-1 blockade with adoptive T cell therapy, particularly with chimeric antigen receptor (CAR) T cells.

The mechanistic rationale for this combination stems from several observations:

First, PD-1 expression is significantly increased on CAR T cells following antigen-specific stimulation with PD-L1+ tumor cells, potentially limiting their efficacy . Studies have shown that markers of activation and proliferation are increased in CAR T cells in the presence of anti-PD-1 antibody, suggesting enhanced functionality .

Second, in adoptive transfer studies, combination therapy significantly improves growth inhibition of PD-L1-expressing tumors treated with antigen-specific T cells plus anti-PD-1 antibody compared to either approach alone . The therapeutic effects observed correlate with increased function of the transferred T cells following PD-1 blockade .

Third, an unexpected mechanism involves modulation of immunosuppressive cells. Research has demonstrated a significant decrease in the percentage of Gr1+ CD11b+ myeloid-derived suppressor cells (MDSCs) in the tumor microenvironment of mice treated with the combination therapy . This suggests that anti-PD-1 antibodies may indirectly enhance CAR T cell efficacy by reducing MDSC-mediated immunosuppression.

Interestingly, the enhanced antitumor effects were not associated with increased localization of transferred T cells at the tumor site, as no difference was observed in the percentage of donor T cells between groups receiving anti-PD-1 compared with isotype control antibody . This indicates that functional enhancement of T cells, rather than improved tumor infiltration, may be the primary mechanism of synergy in this combination approach.

How do heterogeneous autoantibody profiles influence immunotherapy response and autoimmune adverse events?

Heterogeneity in autoantibody profiles can significantly impact both immunotherapy efficacy and the development of immune-related adverse events. This concept is particularly relevant when considering the overlap between autoimmunity and cancer immunotherapy.

Research on islet autoantibodies in type 1 diabetes (T1D) provides insights into how autoantibody diversity may influence immunotherapy responses. Islet autoantibodies form the foundation for T1D diagnosis and staging, with heterogeneity existing in T1D development and presentation . Studies have identified correlations between autoantibody number, type, and titers with disease progression, as well as differing phenotypes based on the order of autoantibody seroconversion . These patterns interact with age and genetics, creating distinct immunological profiles .

In the context of PD-1 blockade therapy, these insights suggest that pre-existing autoantibody profiles might predict both response to therapy and risk of autoimmune adverse events. Animal models have demonstrated that PD-1 deficiency induces various spontaneous autoimmune diseases depending on the genetic background of the mice . For example, mice lacking PD-1 developed dilated cardiomyopathy through the exhibition of high-titer circulating IgG autoantibodies to troponin I on the BALB/c background , while PD-1 deficiency specifically accelerated the onset and frequency of type I diabetes in nonobese diabetic (NOD) mice .

Interestingly, despite these concerns, studies combining CAR T cell treatment with anti-PD-1 antibody administration have shown no signs of autoimmunity in recipient mice, even when targeting self-antigens . This suggests that the controlled blockade of PD-1 in therapeutic settings may have a different autoimmune risk profile than complete genetic absence of PD-1.

What are the critical considerations for designing experiments with PD-1 antibodies in preclinical models?

When designing experiments with PD-1 antibodies in preclinical models, researchers should consider several critical factors to ensure robust and translatable results:

Second, careful attention to dosing regimens and timing is crucial. The optimal timing of anti-PD-1 administration relative to other interventions (such as adoptive T cell transfer) can significantly impact outcomes. In combination therapy studies, administration of anti-PD-1 antibody significantly improved growth inhibition of PD-L1-expressing tumors treated with antigen-specific T cells .

Third, comprehensive immune monitoring should be incorporated to assess not only direct effects on target cells but also indirect effects on the tumor microenvironment. Studies have revealed unexpected mechanisms, such as decreases in myeloid-derived suppressor cells following anti-PD-1 therapy . Monitoring should include assessment of:

  • T cell activation markers and cytokine production

  • T cell infiltration into tumors

  • Changes in immunosuppressive cell populations (MDSCs, Tregs)

  • PD-1 expression levels on relevant cell populations

Fourth, potential autoimmune toxicities should be monitored, particularly when targeting self-antigens. While studies have shown that increased antitumor effects were not associated with autoimmune pathology in normal tissue expressing target antigens , this remains an important safety consideration given the role of PD-1 in maintaining peripheral tolerance .

Finally, standardization of antibody characterization is essential. Only 44% of studies on autoantibodies specifically described autoantibody assay standardization program participation , highlighting a need for improved standardization in immunotherapy research.

How should researchers standardize PD-1/PD-L1 expression assessment for consistent reporting?

Standardization of PD-1/PD-L1 expression assessment is critical for consistent reporting and comparison across studies. Based on current research practices and identified gaps, researchers should implement the following standardization approaches:

First, participation in standardization programs should be mandatory. Review of islet autoantibody studies revealed that only 44% specifically described autoantibody assay standardization program participation . For PD-1/PD-L1 assessment, researchers should similarly participate in established harmonization initiatives and clearly document this participation in methods sections.

Second, comprehensive methodological reporting is essential. Researchers should document:

  • Antibody clone, manufacturer, and lot number

  • Staining protocol with detailed conditions (concentration, incubation time, temperature)

  • Platform used for analysis (flow cytometry, immunohistochemistry, etc.)

  • Gating strategy for flow cytometry or scoring system for immunohistochemistry

  • Positive and negative controls used

  • Cut-off values for defining positive expression and rationale

Third, multiple detection methods should be considered when feasible. Combining techniques such as immunohistochemistry with flow cytometry or mRNA expression analysis can provide more robust characterization of PD-1/PD-L1 expression patterns.

Fourth, spatial and temporal heterogeneity should be addressed. Researchers should assess PD-1/PD-L1 expression across different tumor regions and at multiple timepoints when possible, as expression can be dynamic and heterogeneous .

Fifth, functional validation should complement expression data. Since expression alone may not predict functional significance, researchers should incorporate functional assays to assess the impact of PD-1/PD-L1 expression on immune cell activity.

Based on the systematic review of autoantibody studies, a methods checklist for manuscripts has been proposed to improve reproducibility and applicability of precision medicine approaches . A similar standardized reporting framework for PD-1/PD-L1 assessment would significantly enhance research quality and translational relevance.

What assays best measure functional outcomes of PD-1 blockade beyond tumor size reduction?

To comprehensively evaluate the functional outcomes of PD-1 blockade beyond tumor size reduction, researchers should employ multiple complementary assays that assess various aspects of anti-tumor immunity:

First, T cell functionality assays provide direct measurement of enhanced immune responses. Key measures include:

  • Intracellular cytokine staining for IFN-γ, TNF-α, and IL-2 production in tumor-infiltrating or peripheral T cells

  • Cytotoxicity assays measuring target cell killing efficiency

  • Proliferation assays using Ki-67 staining or CFSE dilution to assess T cell expansion

  • Expression of activation markers such as CD25, CD69, and HLA-DR

Second, metabolic assays can reveal fundamental changes in T cell biology. Research has shown that PD-1 alters T-cell metabolic reprogramming by inhibiting glycolysis and promoting lipolysis and fatty acid oxidation . Assays measuring:

  • Oxygen consumption rate (OCR)

  • Extracellular acidification rate (ECAR)

  • Nutrient uptake (glucose, fatty acids)

  • Metabolic enzyme expression and activity

Third, comprehensive immune cell profiling in the tumor microenvironment can identify broader immunomodulatory effects. Studies have shown that PD-1 blockade can decrease MDSC populations . Researchers should assess:

  • Changes in frequency of immunosuppressive cells (MDSCs, Tregs)

  • Alterations in myeloid cell phenotypes and functions

  • Modifications to the cytokine/chemokine milieu

  • Changes in recruitment of other immune cell subsets

Fourth, molecular analyses can identify mechanistic changes underlying therapeutic effects:

  • Transcriptional profiling to identify changes in gene expression patterns

  • Phosphoproteomic analysis to assess signaling pathway alterations

  • Epigenetic profiling to detect changes in chromatin accessibility

  • Single-cell analyses to identify cell-specific responses

Fifth, in vivo imaging approaches provide longitudinal assessment of dynamic responses:

  • Intravital microscopy to visualize T cell-tumor cell interactions

  • Reporter systems to track T cell activation and tumor cell killing

  • PET imaging with tracers for metabolic activity or immune cell infiltration

In studies of anti-PD-1 antibody with CAR T cells, researchers observed significantly increased expression of intracellular IFN-γ in adoptively transferred T cells following PD-1 blockade, providing a functional readout of enhanced immune activity . This combination of functional, metabolic, cellular, molecular, and imaging approaches provides comprehensive assessment of PD-1 blockade outcomes.

How can researchers address variability in PD-1 antibody efficacy across different tumor models?

Addressing variability in PD-1 antibody efficacy across tumor models requires systematic investigation of multiple factors that influence response:

First, thoroughly characterize PD-L1 expression patterns in each model. Clinical evidence suggests a correlation between PD-L1 expression and response to PD-1 blockade . Researchers should quantify PD-L1 expression levels, patterns (constitutive vs. inducible), and cellular localization (tumor cells vs. immune cells) across models. Importantly, PD-L1 expression can be dynamic, so assessment should be performed at multiple timepoints during tumor progression.

Second, analyze the baseline immune infiltrate composition. The presence and functionality of pre-existing tumor-infiltrating lymphocytes (TILs) significantly impacts anti-PD-1 efficacy. Models with "cold" tumors (few TILs) typically respond poorly to PD-1 blockade alone. Comprehensive immune profiling should assess:

  • Density and distribution of CD8+ T cells

  • Presence of immunosuppressive cell populations (MDSCs, Tregs)

  • Ratio of effector to regulatory T cells

  • Activation state of infiltrating immune cells

Third, evaluate tumor-intrinsic resistance mechanisms. Research has shown that tumors employ multiple strategies to evade PD-1 blockade. Analyze:

  • Alternative immune checkpoint expression (CTLA-4, LAG-3, TIM-3)

  • Defects in antigen presentation machinery

  • Oncogenic signaling pathways that modulate immune responses

  • Metabolic properties of the tumor microenvironment

Fourth, consider combination approaches tailored to specific resistance mechanisms. For example, in models with low T cell infiltration, combining PD-1 blockade with strategies to enhance T cell recruitment may be beneficial. Studies have demonstrated that combined CAR T cell therapy with anti-PD-1 antibody significantly increased growth inhibition of tumors compared to either approach alone .

Fifth, implement standardized experimental protocols across models. Variability in dosing regimens, administration routes, and assessment timepoints can confound cross-model comparisons. Researchers should develop consistent protocols while systematically documenting any model-specific adjustments.

By systematically addressing these factors, researchers can better understand and predict variability in PD-1 antibody efficacy, enabling more rational design of therapeutic strategies for different tumor types.

What are the most effective approaches to minimize false positives/negatives in PD-1/PD-L1 expression analysis?

Minimizing false positives and negatives in PD-1/PD-L1 expression analysis requires rigorous technical approaches and appropriate controls:

First, implement robust antibody validation protocols. For flow cytometry or immunohistochemistry:

  • Use multiple antibody clones targeting different epitopes

  • Include appropriate positive controls (cell lines with known expression)

  • Include negative controls (PD-1/PD-L1 knockout cells or isotype controls)

  • Verify specificity through blocking experiments

  • Consider orthogonal detection methods (e.g., RNA-seq, mass spectrometry)

Second, standardize sample processing procedures. Variations in fixation, preservation, and processing can significantly affect antigen detection:

  • Establish consistent timing between sample collection and processing

  • Standardize fixation protocols (agent, duration, temperature)

  • Implement automated staining platforms when possible

  • Document any deviations from standard protocols

Third, establish quantitative scoring systems with clear thresholds. The literature on autoantibody research highlights the importance of standardization programs, with only 44% of studies specifically describing participation in such programs . For PD-1/PD-L1 assessment:

  • Define objective cutoffs for positive expression

  • Consider continuous measures rather than binary classification when appropriate

  • Document the scoring system in detail, including how heterogeneous expression is handled

  • Implement digital image analysis when possible to reduce observer bias

Fourth, address biological factors that influence expression. PD-1/PD-L1 expression is dynamic and context-dependent:

  • Sample multiple regions to account for intratumoral heterogeneity

  • Consider temporal dynamics by sampling at multiple timepoints

  • Document relevant treatments prior to sampling

  • Assess expression on both tumor and immune cell populations

Fifth, implement multi-analyst verification for subjective assessments:

  • Use multiple trained observers for scoring

  • Calculate inter-observer and intra-observer concordance

  • Consider blinded analysis to reduce bias

  • Implement consensus review for discrepant cases

By combining these approaches, researchers can substantially reduce false positives and negatives in PD-1/PD-L1 expression analysis, improving the reliability and reproducibility of results across studies.

How can researchers distinguish between direct effects of PD-1 blockade on T cells versus indirect effects on the tumor microenvironment?

Distinguishing between direct effects of PD-1 blockade on T cells and indirect effects on the tumor microenvironment requires sophisticated experimental approaches that isolate specific cellular interactions:

First, conduct comprehensive temporal profiling to establish causality. By analyzing changes at multiple timepoints after PD-1 blockade, researchers can determine which effects occur first:

  • Early events (hours to days) often represent direct effects on PD-1-expressing cells

  • Later events (days to weeks) may reflect secondary adaptations or indirect effects

  • Sequential sampling of both blood and tumor tissue can reveal how systemic immune changes translate to the tumor microenvironment

Second, utilize cell-specific genetic approaches. Conditional knockout or knockdown of PD-1 in specific cell populations can help isolate direct effects:

  • T cell-specific PD-1 deletion versus systemic antibody blockade

  • Compare outcomes when PD-1 is selectively deleted from different immune cell types

  • Use adoptive transfer of PD-1-deficient versus wild-type cells to compare behavior in the same microenvironment

Third, implement ex vivo and in vitro systems to isolate cellular interactions:

  • Isolate tumor-infiltrating lymphocytes for functional studies with or without PD-1 blockade

  • Co-culture experiments with defined cell populations can reveal direct cellular interactions

  • Three-dimensional organoid cultures incorporating immune components can bridge the gap between in vitro and in vivo systems

Fourth, apply single-cell technologies to resolve heterogeneous responses:

  • Single-cell RNA sequencing to identify cell-specific transcriptional changes

  • Mass cytometry to simultaneously measure multiple protein markers across cell types

  • Spatial transcriptomics to map expression changes while preserving tissue architecture

  • Multiplexed imaging to visualize cell-cell interactions in the tissue context

Fifth, use selective depletion studies to establish necessity. Research has shown unexpected effects of PD-1 blockade on myeloid-derived suppressor cells (MDSCs) . Selective depletion experiments can test whether:

  • MDSC reduction is necessary for therapeutic efficacy

  • Changes in other cell populations are dependent or independent of T cell activation

  • Combining PD-1 blockade with selective depletion of specific cell populations enhances or diminishes efficacy

In adoptive transfer studies, researchers observed that while anti-PD-1 antibody treatment enhanced T cell function, it did not alter the percentage of donor T cells at the tumor site . This suggested indirect mechanisms were involved, highlighting the importance of comprehensive assessment beyond direct T cell effects.

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