SBT4.12 Antibody

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Description

Clarification of Terminology

The term "SBT4.12" does not align with any known antibody or enzyme in the provided sources. Possible interpretations include:

  • Typographical Error: A misreference to SBT4.13, a subtilase protease studied in plant stress responses .

  • Unpublished Compound: A novel antibody not yet indexed in public databases.

  • Nomenclature Ambiguity: Conflation with SBT Biotechnology’s sdAbs (e.g., SBT-100), which target intracellular proteins like KRAS and STAT3 .

Related Compounds: SBTand Subtilase Inhibitors

While SBT4.12 Antibody is not documented, SBT4.13 has been extensively characterized:

SBT Biotechnology’s Single-Domain Antibodies (sdAbs)

Though unrelated to SBT4.12, SBT-100 (a bi-specific sdAb) exemplifies advanced antibody engineering:

FeatureDetailsSource
TargetsKRAS (G12D mutant) and STAT3
AffinityKd values: 4.20 nM (KRAS), 15 nM (KRAS G12D), 22.4 nM (STAT3)
Therapeutic PotentialCrosses blood-brain barrier; inhibits cancer cell proliferation in vitro

Applications:

  • Cancer Therapy: Targets intracellular oncogenic proteins undruggable by conventional antibodies.

  • Infectious Diseases: Demonstrates antiviral activity (90–95% inhibition in vitro) .

Methodological Considerations for Future Research

To investigate "SBT4.12 Antibody," researchers should:

  1. Verify Nomenclature: Confirm whether "SBT4.12" refers to an antibody, enzyme, or related compound.

  2. Explore Antibody Platforms:

    • sdAb Platforms: Leverage SBT Biotechnology’s technology for intracellular targeting .

    • Conventional Antibodies: Develop probes for SBT4.13 (e.g., using epitope mapping techniques ).

  3. Assess Functional Relevance:

    • Protease Inhibition: Evaluate whether SBT4.12 Antibody modulates enzymatic activity (e.g., via SPI-1-like mechanisms ).

    • ROS Regulation: Investigate cross-talk between subtilases, NOXs, and oxidative stress pathways .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
SBT4.12 antibody; At5g59090 antibody; K18B18.9Subtilisin-like protease SBT4.12 antibody; EC 3.4.21.- antibody; Subtilase subfamily 4 member 12 antibody; AtSBT4.12 antibody
Target Names
SBT4.12
Uniprot No.

Target Background

Gene References Into Functions
The SBT4.12 antibody targets the gene encoding a subtilisin-like serine protease, which is localized in the apoplast of root stele, including the xylem vessel. This protein may be involved in stress responses. For further information, please refer to the following publication: PMID: 19832941
Database Links

KEGG: ath:AT5G59090

STRING: 3702.AT5G59090.1

UniGene: At.25250

Protein Families
Peptidase S8 family
Subcellular Location
Secreted.
Tissue Specificity
Specifically expressed in root stele of the root hair zone.

Q&A

Here’s a structured FAQ collection for researchers working with the SBT4.12 antibody, synthesized from scientific literature and technical guidelines. The content is organized into basic and advanced research questions, with methodological insights and data-driven analyses.

What is the recommended protocol for reconstituting lyophilized SBT4.12 antibody?

Reconstitute lyophilized antibody in deionized water (volume specified in the datasheet) followed by PBS. For stability:

  • Add 2% BSA or carrier protein if not pre-formulated .

  • For fluorescence-labeled variants, mix 1:1 with glycerol to prevent freezing at -20°C .

  • Avoid repeated freeze-thaw cycles by aliquoting .

How should SBT4.12 antibody be stored for long-term use?

  • Store lyophilized antibody at -20°C or -80°C.

  • Reconstituted antibodies:

    • Short-term: 4°C with 0.02% sodium azide .

    • Long-term: Aliquot and store at -20°C in 50% glycerol .

What controls are essential for validating SBT4.12 specificity in Western blotting?

  • Negative controls: Knockout cell lines or tissues.

  • Isotype controls: Non-targeting IgG from the same host species.

  • Competition assays: Pre-incubate with excess antigen to block binding .

How can epitope mapping resolve contradictions in SBT4.12 binding specificity?

SBT4.12 targets TNFR2 with potential cross-reactivity to rhesus monkey TNFR2 but not mouse . To confirm specificity:

  • Use CRD domain-swap mutants (e.g., CRD2 vs. CRD3) to identify binding regions .

  • Perform surface plasmon resonance (SPR) to compare binding kinetics between human and non-human orthologs .

What functional assays validate SBT4.12’s agonist/antagonist activity on TNFR2 signaling?

AssayMethodOutcome
NFκB activationLuciferase reporter in TCR-activated CD8+/CD4+ T cells Enhanced signaling indicates agonist activity
T cell proliferationCFSE dilution assay with TNFα co-stimulation Increased proliferation confirms co-stimulation
Competitive ELISAPre-incubate TNFR2 with TNFα; measure SBT4.12 binding inhibition Reduced binding suggests antagonism

How do developability mutations in SBT4.12 impact its stability and aggregation?

  • Point mutations (e.g., surface charge optimization, hydrophobic residue substitution) reduce aggregation during manufacturing .

  • Accelerated stability testing:

    • Incubate at 40°C for 4 weeks.

    • Analyze monomeric content via size-exclusion chromatography (SEC-HPLC) .

Why does SBT4.12 show variable effects on Treg vs. effector T cells?

SBT4.12’s Fc-independent agonism selectively activates effector T cells (CD8+/CD4+) but may promote Treg expansion in specific microenvironments . To dissect mechanisms:

  • Use FcγR knockout mice to isolate Fc-dependent vs. independent effects.

  • Compare transcriptomes (RNA-seq) of treated Tregs vs. effectors .

How to address conflicting data on SBT4.12’s cross-reactivity with TNFR1?

  • Perform cross-blocking assays with TNFR1-specific antibodies (e.g., H398) .

  • Use flow cytometry on TNFR1/TNFR2 double-transfected HEK293 cells.

Inconsistent NFκB activation across cell types: Technical or biological?

  • Technical factors:

    • Verify TCR activation status (CD3/CD28 stimulation required for SBT4.12 co-stimulation) .

    • Optimize antibody concentration (dose-dependent effects reported) .

  • Biological factors:

    • TNFR2 expression levels (flow cytometry quantification recommended).

Unexpected bands in Western blotting with SBT4.12: Degradation or isoforms?

  • Degradation: Include fresh protease inhibitors; avoid repeated freeze-thaw cycles .

  • Isoforms: Perform glycosidase treatment (e.g., PNGase F) to resolve post-translational modifications .

Methodological Best Practices

  • Co-stimulation assays: Use primary T cells (≥95% purity) to avoid confounding myeloid cell interactions .

  • In vivo models: Prioritize rhesus TNFR2-humanized mice for translational studies due to cross-reactivity .

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