Catalog and Conjugation
The antibody is part of the Affinity Biosciences (Catalog DF12737) and American Research Products (Catalog CSB-PA801243LC01HU) portfolios. It is conjugated with fluorescein isothiocyanate (FITC), a green-fluorescing dye, enabling visualization via fluorescence microscopy .
Immunogen and Specificity
The antibody targets the 48-137 amino acid region of human SGMS1, ensuring specificity for the enzyme’s functional domain . It exhibits reactivity with human samples, with predicted cross-reactivity in other species (e.g., mouse, rat) based on sequence homology .
Western Blot (WB): Detects denatured SGMS1 in cell lysates .
Immunohistochemistry (IHC): Stains paraffin or frozen tissue sections .
ELISA/Dot Blot: Quantifies SGMS1 in solution or membrane-bound formats .
Immunofluorescence (IF): FITC conjugation allows live-cell or fixed-cell imaging of SGMS1 localization .
SGMS1 catalyzes the conversion of ceramide and phosphatidylcholine into sphingomyelin, a critical component of lipid rafts . Its dysfunction has been linked to impaired influenza and rubella virus replication, as lipid rafts facilitate viral assembly .
SGMS1 suppresses ceramide-mediated apoptosis by modulating BAX activation, offering protective mechanisms against oxidative stress and heat shock .
In SGMS1-deficient cells, influenza virus production is reduced by ~50%, suggesting sphingomyelin is essential for viral budding . Similarly, rubella virus entry via clathrin-dependent endocytosis is unaffected by SGMS1 loss, indicating lipid synthesis impacts post-entry steps .
| Catalog | Conjugate | Applications | Reactivity |
|---|---|---|---|
| DF12737 (Affinity) | Unconjugated | WB, IHC | Human, Mouse |
| ABIN7163133 | FITC | ELISA, IF | Human |
| CSB-PA801243LC01HU | FITC | ELISA, Dot Blot | Human |
SGMS1 (Sphingomyelin Synthase 1) is a key enzyme in sphingolipid metabolism that catalyzes the reversible transfer of phosphocholine moiety in sphingomyelin biosynthesis. In the forward reaction, it transfers the phosphocholine head group from phosphatidylcholine (PC) onto ceramide (CER) to form ceramide phosphocholine (sphingomyelin, SM) and diacylglycerol (DAG) as by-product . The direction of the reaction depends on the levels of CER and DAG in Golgi membranes .
SGMS1 regulates several critical cellular processes:
Signal transduction through regulation of mitogenic DAG and proapoptotic CER levels
Membrane raft formation and organization, which serve as platforms for signal transduction and protein sorting
Secretory transport via regulation of DAG pool at the Golgi apparatus
Osteogenic differentiation and osteogenesis-angiogenesis coupling in mesenchymal stem cells
Viral assembly and production, particularly for influenza virus
SGMS1 is widely distributed in mammalian tissues, with expression detected in:
| Tissue Type | Expression Level |
|---|---|
| Brain | High |
| Heart | High |
| Kidney | Moderate |
| Liver | Moderate |
| Muscle | Moderate |
| Stomach | Moderate |
At the subcellular level, SGMS1 serves as the major sphingomyelin synthase at the Golgi apparatus . It contains multiple transmembrane domains and functions as an integral membrane protein within the Golgi complex, where it plays a critical role in sphingolipid biosynthesis and membrane organization.
For flow cytometry applications using FITC-conjugated SGMS1 antibodies, follow these methodological steps for optimal results:
Cell preparation: Harvest cells (1-5×10^6) and wash twice with PBS containing 1% BSA.
Fixation/permeabilization:
For intracellular staining (recommended for SGMS1), fix cells with 4% paraformaldehyde for 10-15 minutes at room temperature
Permeabilize with 0.1% Triton X-100 for 5 minutes or 90% ice-cold methanol for 30 minutes on ice
Blocking: Block with 5% normal serum in PBS for 30 minutes to reduce non-specific binding.
Antibody staining:
Dilute FITC-conjugated SGMS1 antibody to the recommended concentration (typically 1:50-1:200)
Incubate cells with diluted antibody for 30-60 minutes at room temperature in the dark
Include appropriate isotype controls
Washing: Wash cells 3 times with PBS containing 1% BSA.
Analysis:
Analyze using flow cytometer with 488 nm excitation laser
Collect at least 10,000 events per sample
Apply compensation if multiple fluorochromes are used
For multiparameter analysis, combine with antibodies in non-overlapping channels (APC, PE, or Pacific Blue).
For immunofluorescence applications with FITC-conjugated SGMS1 antibodies:
Sample preparation:
For cell cultures: Grow cells on coverslips and fix with 4% paraformaldehyde for 15 minutes
For tissue sections: Use freshly frozen or paraffin-embedded sections (4-8 μm thick)
Antigen retrieval for tissue sections:
Permeabilization: Treat with 0.2% Triton X-100 in PBS for 10 minutes at room temperature.
Blocking: Block with 5% normal serum and 1% BSA in PBS for 1 hour at room temperature.
Primary antibody incubation:
Washing: Wash 3 times with PBS, 5 minutes each.
Nuclear counterstaining: Stain with DAPI (1 μg/ml) for 5 minutes.
Mounting: Mount with anti-fade mounting medium.
Imaging:
Use appropriate filter sets for FITC (excitation: 490 nm, emission: 525 nm)
Capture z-stacks for colocalization analysis
Minimize exposure time to prevent photobleaching
SGMS1 plays a critical role in mesenchymal stem cell (MSC) osteogenic differentiation and angiogenesis coupling. To investigate this pathway:
Experimental design for SGMS1 functional analysis in MSCs:
Culture MSCs in either normal medium (NM) or osteogenic medium (OM)
Monitor SGMS1 expression changes during differentiation using FITC-conjugated antibodies
Compare with expression of osteogenic markers (Runx2, alkaline phosphatase)
Key methodological steps:
Perform immunofluorescence staining for SGMS1 at different time points (days 0, 3, 7, 14, 21)
Quantify fluorescence intensity changes
Correlate with osteogenic marker expression
Expected results based on published findings:
Advanced analysis:
Co-staining for SGMS1 (FITC-conjugated) and Runx2 (using a different fluorophore)
Determine colocalization coefficients
Perform live-cell imaging to track SGMS1 dynamics during differentiation
Research has shown that SGMS1 transcription is regulated by Runx2, creating a positive feedback loop during osteogenic differentiation . SGMS1 also promotes VEGF expression, linking osteogenesis to angiogenesis.
When studying SGMS1's role in viral infections, especially influenza:
Experimental setup:
Compare wild-type cells with SGMS1-deficient cells (SGMS1 GT or SGMS1 knockdown)
Infect with influenza virus at MOI 0.1
Track viral replication and assembly
Sample preparation for antibody-based detection:
Fix cells at different time points post-infection (0, 6, 12, 24 hours)
Permeabilize with 0.1% Triton X-100
Block with 3% BSA in PBS
Immunofluorescence analysis:
Use FITC-conjugated SGMS1 antibody (1:100 dilution)
Co-stain with antibodies against viral proteins (HA, NA)
Include lipid raft markers (cholera toxin B subunit)
Expected findings based on research:
Research has demonstrated that SGMS1 is critical for the transport of viral glycoproteins to the cell surface, affecting the release of virus particles from infected cells .
Background fluorescence is a common challenge when working with FITC-conjugated antibodies. To minimize this issue:
Optimize fixation and permeabilization:
Test different fixatives (4% PFA, methanol, or acetone)
Adjust permeabilization time (3-15 minutes) and detergent concentration (0.1-0.5% Triton X-100)
Blocking optimization:
Use 5-10% serum from the species in which the secondary antibody was raised
Add 0.1-0.3% Triton X-100 to blocking solution to reduce non-specific binding
Consider using commercial blocking reagents with protein and non-protein blockers
Antibody dilution optimization:
Prepare a dilution series (1:20, 1:50, 1:100, 1:200) to determine optimal concentration
Incubate at 4°C overnight rather than at room temperature
Washing steps:
Increase number of washes (5-6 times)
Use PBS with 0.05% Tween-20 for more efficient removal of unbound antibody
Extend washing time to 10 minutes per wash
Reduce autofluorescence:
Treat samples with 0.1% Sudan Black B in 70% ethanol for 10-20 minutes
Use commercial autofluorescence quenchers specific for the sample type
Include 10 mM NH₄Cl in wash buffer to reduce aldehyde-induced autofluorescence
Control experiments:
Include isotype controls at the same concentration as the SGMS1 antibody
Perform staining on SGMS1 knockout/knockdown cells to confirm specificity
Validating antibody specificity is critical for reliable research findings. For SGMS1 antibodies:
Genetic approaches:
Test the antibody on SGMS1 knockout or knockdown cells/tissues
Compare staining patterns between wild-type and SGMS1-deficient samples
Use siRNA or CRISPR-Cas9 to generate SGMS1-depleted controls
Protein-level validation:
Immunoprecipitation validation:
Use the antibody for immunoprecipitation followed by mass spectrometry
Confirm pull-down of SGMS1 protein and associated complexes
Peptide competition assay:
Pre-incubate antibody with excess immunizing peptide
Compare staining with and without peptide competition
Specific signals should be significantly reduced or eliminated
Orthogonal validation:
Compare results with different antibodies targeting distinct SGMS1 epitopes
Correlate protein detection with mRNA levels using RT-PCR
Cross-reactivity assessment:
Test the antibody against related proteins (e.g., SGMS2)
Ensure the antibody distinguishes between family members
For accurate quantification and interpretation of SGMS1 expression changes:
Image acquisition standardization:
Use identical microscope settings for all samples
Capture multiple fields per sample (minimum 5-10)
Include time-course samples in the same imaging session when possible
Quantification methods:
For fluorescence intensity: Measure mean fluorescence intensity (MFI) of entire cells or specific compartments
For colocalization analysis: Calculate Pearson's correlation coefficient or Manders' overlap coefficient
For expression patterns: Quantify the percentage of cells with specific staining patterns
Normalization approaches:
Normalize to housekeeping proteins or total protein content
Use internal controls within the same sample
Account for cell size/morphology changes during differentiation
Statistical analysis:
Apply appropriate statistical tests (t-test, ANOVA) based on experimental design
Use multiple biological replicates (minimum n=3)
Consider time course dynamics using repeated measures analysis
Interpretation framework:
Compare SGMS1 expression patterns with known differentiation markers
Consider the temporal sequence of events (e.g., SGMS1 changes precede or follow other markers)
Correlate with functional outcomes (e.g., mineralization in osteogenic differentiation)
Visualization techniques:
Generate heatmaps showing expression changes across time points
Create scatterplots showing correlations between SGMS1 and other markers
Use violin plots to show distribution shifts in expression levels
Based on published research, expect SGMS1 expression to increase during osteogenic differentiation, correlating with increased expression of Runx2 and other osteogenic markers. The relationship appears bidirectional, as Runx2 transcriptionally activates SGMS1 expression .
When designing co-localization experiments:
Based on research findings, SGMS1 strongly co-localizes with Golgi markers, and during osteogenic differentiation, its expression pattern may overlap with signaling molecules in the Cer/PP2A/Akt pathway .
The Cer/PP2A/Akt signaling pathway is critically regulated by SGMS1 during processes like osteogenic differentiation. To investigate this pathway:
Experimental design for pathway analysis:
Compare wild-type cells with SGMS1 overexpression or knockdown models
Examine changes in ceramide levels, PP2A activity, and Akt phosphorylation
Monitor downstream effects on Runx2 and VEGF expression
Immunofluorescence-based analysis:
Use FITC-conjugated SGMS1 antibody (1:100 dilution)
Co-stain with antibodies against phosphorylated Akt and Runx2
Analyze subcellular localization patterns and expression levels
Biochemical validation:
Combine immunofluorescence with sphingolipid quantification
Measure ceramide and sphingomyelin levels using mass spectrometry
Correlate lipid changes with protein expression patterns
Expected results based on research findings:
Advanced analysis techniques:
Use FRET (Förster Resonance Energy Transfer) to detect protein-protein interactions
Apply time-lapse imaging to track dynamic changes in signaling
Implement computational modeling to integrate pathway components
Research has demonstrated that SGMS1 induces osteogenic differentiation of MSCs and osteogenic-angiogenic coupling through regulation of the Cer/PP2A/Akt signaling pathway . This interconnection provides a mechanistic basis for developing therapeutic approaches for skeletal dysplasia and bone defects.
SGMS1 plays a crucial role in membrane organization, particularly in lipid raft formation. To study this function:
Experimental design for membrane studies:
Compare wild-type cells with SGMS1-deficient models
Examine changes in lipid raft composition and organization
Assess impact on protein segregation at membrane microdomains
Detergent-resistant membrane isolation:
Extract membranes with cold 1% Triton X-100
Fractionate using sucrose gradient ultracentrifugation
Analyze SGMS1 distribution using immunoblotting or immunofluorescence
Advanced imaging techniques:
Super-resolution microscopy (STORM, PALM, or STED) to visualize nanoscale organization
FITC-conjugated SGMS1 antibody combined with lipid raft markers
Live-cell imaging to track dynamic reorganization
Functional assays:
Monitor receptor clustering (e.g., dectin-1) at pathogen contact sites
Assess CD45 segregation from signaling complexes
Quantify changes in phagocytic capacity
Expected outcomes based on research:
Research has shown that in SGMS1-deficient cells, CD45 fails to efficiently segregate from receptor clusters (e.g., dectin-1) at pathogen contact sites, suggesting that sphingolipid biosynthesis is critical for the lateral organization of signaling molecules .