SKOR Antibody

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Description

Definition and Biological Role

SKOR antibodies are immunoglobulin G (IgG) autoantibodies that bind to the SKOR2 protein, a neural-specific antigen expressed in tumors. SKOR2 is involved in transcriptional regulation and is expressed in cerebellar neurons, particularly at the Purkinje cell-granule cell junction . These antibodies are detected in patients with PNS, where the immune system mistakenly targets neural antigens expressed by cancerous cells .

Key Studies

A 2023 study identified SKOR2 IgG using programmable phage immunoprecipitation sequencing (PhIP-Seq) in two patients with adenocarcinoma and progressive neurological symptoms :

PatientCancer TypeNeurological Symptoms
1Lung adenocarcinomaEncephalitis, seizures
2Gallbladder adenocarcinomaCognitive dysfunction, spastic ataxia, dysarthria, dysphagia, pseudobulbar affect
  • Validation Methods:

    • Tissue Immunofluorescence (IFA): Demonstrated nuclear staining at the Purkinje cell-granule cell junction .

    • Recombinant CBA: Confirmed SKOR2-specific IgG binding in transfected COS7 cells .

    • Western Blot: Detected a 130-kD band in SKOR2-expressing lysates .

Cancer Association

  • SKOR2 expression was confirmed in lung adenocarcinoma tissue via immunohistochemistry .

  • No reactivity was observed in 30 adenocarcinoma patients without PNS, supporting its specificity .

Diagnostic and Prognostic Significance

  • Biomarker Utility: SKOR2 IgG serves as a high-risk paraneoplastic marker, with malignancy association rates potentially exceeding 70% .

  • Testing Protocols:

    1. Tissue IFA: Screening for cerebellar staining patterns.

    2. CBA/Western Blot: Confirmatory testing for SKOR2 specificity .

  • Limitations: Small cohort size (two cases) and phenotypic variability necessitate further validation .

Future Directions

  • Larger studies are needed to define the full clinical spectrum and optimize detection methods.

  • SKOR2’s role in tumor immunology and neural cross-reactivity remains under investigation .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
SKOR antibody; At3g02850 antibody; F13E7.21 antibody; Potassium channel SKOR antibody; Stelar K(+) outward rectifying channel antibody
Target Names
SKOR
Uniprot No.

Target Background

Function
SKOR is a highly selective outward-rectifying potassium channel. It plays a crucial role in potassium release into the xylem sap, facilitating its transport towards the shoots. SKOR operates by transitioning between open and closed conformations in response to voltage differences across the membrane, being activated by depolarization. Notably, its voltage-dependence is abolished under internal or external acidic conditions. Furthermore, SKOR may interact with the cytoskeleton or with regulatory proteins.
Gene References Into Functions
  1. Research indicates that nutritional conditions play a critical role in the joint activity of Arabidopsis proteins SKOR and NPF7.3/NRT1.5, which are essential for maintaining potassium homeostasis in shoots. PMID: 26508776
  2. Studies have revealed that the N-terminal part of the S5 domain is critically involved in the gating mechanisms of KAT1 and SKOR channels. PMID: 20007672
  3. A minimal cysteine motif has been identified as essential for activating the SKOR K+ channel of Arabidopsis by the reactive oxygen species H2O2. PMID: 20605786
  4. Phosphatidylinositol phosphates have been identified as crucial regulators for both voltage-dependent and -independent activation of A. thaliana potassium channels expressed in X. laevis oocytes. PMID: 15842627
  5. The intracellular potassium sensing mechanism links SKOR activity to the potassium nutritional status in 'source cells,' establishing a supply-based unloading system for regulating potassium distribution. PMID: 16623888
  6. Mapping the SKOR sequence to the crystal structure of the voltage-dependent K+ channel suggests interaction between the S6 gating domain and the base of the pore helix, a prediction supported by mutations at this site. PMID: 16623889
  7. Single mutations within SKOR can convert it from an outward K+ channel to an inward K+ channel. PMID: 18287042

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Database Links

KEGG: ath:AT3G02850

STRING: 3702.AT3G02850.1

UniGene: At.41071

Protein Families
Potassium channel family, Plant (TC 1.A.1.4) subfamily
Subcellular Location
Membrane; Multi-pass membrane protein.
Tissue Specificity
Expressed in root pericycle and xylem parenchyma, and in flower at a lower level.

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