SSL8 Antibody

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Description

SSL8 Antibody: Overview and Context

SSL8 is a member of the Staphylococcus aureus staphylococcal superantigen-like (SSL) protein family, which plays critical roles in immune evasion by targeting host immune components . SSL8 specifically inhibits the interaction between tenascin C (TNC) and fibronectin, impairing keratinocyte motility and tissue repair processes . While SSL8’s functional mechanisms are well-characterized, direct research on SSL8-specific antibodies remains limited in publicly available literature. This article synthesizes insights from related SSL antibody studies to infer potential strategies for SSL8 antibody development.

SSL8’s Role in Immune Evasion

SSL8 disrupts the TNC-fibronectin interaction, which is essential for cell adhesion and migration. This interference weakens host defense mechanisms, enabling S. aureus to evade immune responses and establish persistent infections . Key findings include:

  • Target Specificity: SSL8 binds TNC with high affinity, blocking its interaction with fibronectin .

  • Clinical Implications: SSL8 is more prevalent in S. aureus isolates causing atopic dermatitis, suggesting a role in chronic skin infections .

SSL Antibody Development: General Strategies

While SSL8-specific antibodies are not explicitly documented, methodologies for targeting other SSLs (e.g., SSL1, SSL5, SSL10) provide a framework for SSL8 antibody development.

Table 1: SSL Family Members and Their Known Targets

SSL ProteinPrimary TargetImmune Evasion Mechanism
SSL8Tenascin C (TNC)Disrupts TNC-fibronectin interaction
SSL5Matrix Metalloproteinase-9 (MMP-9)Inhibits leukocyte recruitment
SSL10IgG1, Fibrinogen, FibronectinBlocks IgG1-mediated phagocytosis
SSL7IgA FcαRI, Complement C5Inhibits IgA-dependent effector functions

Key Approaches for SSL Antibody Development

  1. Phage Display:

    • Single-chain variable fragment (scFv) antibodies were isolated via phage display against SSL1, SSL5, and SSL10. One scFv inhibited SSL1 by blocking MMP-9 activity .

    • Method: Iterative panning (3 rounds) against purified SSLs, followed by time-resolved fluorescence assays to validate binding .

  2. Monoclonal Antibody (mAb) Production:

    • A mouse hybridoma (30G5C) generated a mAb specific for SSL5, recognizing its C-terminal β-grasp domain without cross-reactivity .

    • Application: Potential use in detecting SSL5-producing S. aureus and screening inhibitors .

Hypothetical SSL8 Antibody Targets and Challenges

SSL8’s structure includes an N-terminal oligonucleotide-binding fold (OB-fold) and a C-terminal β-grasp domain, similar to other SSLs . Based on SSL5’s antibody (which binds the β-grasp domain), SSL8’s C-terminal region may serve as a viable epitope.

Table 2: Potential SSL8 Antibody Epitopes

DomainFunctionAntibody Target Feasibility
N-terminal OB-foldBinds TNC/fibronectin? (Unknown)Low (unproven binding role)
C-terminal β-graspStructural stabilityHigh (similarity to SSL5)

Challenges

  • Sequence Conservation: SSLs share 36–67% homology, necessitating epitope-specific antibodies to avoid cross-reactivity .

  • Functional Validation: Antibodies must block SSL8-TNC interaction without disrupting host protein functions.

Regulatory Insights for SSL8 Expression

SSL8 expression is strain-dependent and regulated by global transcription factors:

  • Positive Regulators: SarA (in RN6390 strain) .

  • Negative Regulators: Rot (in RN6390) .

  • Variable Regulation: In Newman strain, SSL8 is regulated by Sae (positive) and Agr (negative) .

Product Specs

Buffer
Preservative: 0.03% ProClin 300; Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
14-16 week lead time (made-to-order)
Synonyms
SSL8 antibody; SS5 antibody; At3g57010 antibody; F24I3.90 antibody; Protein STRICTOSIDINE SYNTHASE-LIKE 8 antibody; AtSSL8 antibody; Strictosidine synthase 5 antibody; AtSS5 antibody
Target Names
SSL8
Uniprot No.

Target Background

Database Links

KEGG: ath:AT3G57010

STRING: 3702.AT3G57010.1

UniGene: At.25199

Protein Families
Strictosidine synthase family
Subcellular Location
Vacuole.

Q&A

FAQs for SSL8 Antibody Research
Compiled from peer-reviewed studies and methodological frameworks in immunology and antibody engineering.

Advanced Research Questions

  • How to resolve contradictions in SSL8’s binding affinity data across studies?

    • Troubleshooting Framework:

      1. Assay Variability: Compare buffer conditions (pH, ionic strength) and tag systems (His-tag vs. native protein) .

      2. Epitope Accessibility: Use hydrogen-deuterium exchange mass spectrometry (HDX-MS) to map conformational epitopes under different experimental conditions .

      3. Statistical Validation: Apply multivariate analysis to identify confounding variables (e.g., batch effects in hybridoma-derived antibodies) .

  • What computational tools predict SSL8-antibody interactions for rational drug design?

    • Pipeline:

      1. Structure Prediction: AlphaFold2 or RoseTTAFold for SSL8 homology modeling (based on SSL5’s β-grasp domain ).

      2. Binding Simulation: Molecular dynamics (MD) simulations to assess antibody-SSL8 docking stability .

      3. Developability Screening: Machine learning models (e.g., WGAN-GP) to optimize antibody sequences for low hydrophobicity and high thermal stability .

    ToolApplicationValidation Criteria
    AlphaFold2SSL8 structure predictionRMSD <2.0 Å vs. crystallography
    WGAN-GPAntibody sequence generationHumanness score >90%, low self-association
  • How to validate SSL8 antibody specificity in polyclonal sera?

    • Protocol:

      • Depletion Assays: Pre-incubate sera with SSL8-coupled beads to remove cross-reactive antibodies .

      • CRISPR-Cas9 Knockout: Generate SSL8-deficient S. aureus strains to confirm antibody signal loss in immunofluorescence .

      • Phage Display Libraries: Screen synthetic antibody fragments against SSL8 to identify non-overlapping epitopes .

Data Contradiction Analysis

  • Conflicting reports on SSL8’s inhibition of neutrophil migration: How to reconcile?

    • Hypothesis Testing:

      • Variable 1: Strain-specific SSL8 isoforms (e.g., amino acid polymorphisms in clinical isolates).

      • Variable 2: Host MMP-9 genetic variants altering protease-antibody interactions .

    • Resolution: Perform genome-wide association studies (GWAS) on patient cohorts to link MMP-9 polymorphisms to SSL8-mediated immune suppression .

Methodological Best Practices

  • Antibody Validation: Always pair hybridoma-derived mAbs with recombinant Fab fragments to confirm target engagement .

  • Data Reproducibility: Use dual-independent lab validation for critical findings (e.g., neutralization assays in Lab I vs. Lab II ).

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