SSN8 Antibody

Shipped with Ice Packs
In Stock

Description

Antibody Nomenclature Verification

The designation "SSN8" does not correspond to:

  • International Nonproprietary Names (INNs) for therapeutic antibodies

  • Structural antibody database (SAbDab) entries

  • Patent-derived antibody sequences (>3.5 million entries)

  • Autoantibody classifications (e.g., SS-A/Ro, SS-B/La) in rheumatology

Terminology Considerations

ScenarioProbabilitySupporting Evidence
Typographical errorHighProximity to established anti-SS-A/SS-B nomenclature in autoimmune diagnostics
Proprietary research reagentModerateCommon practice for early-stage development antibodies
Obsolete/discontinued candidateLowNo matches in historical therapeutic archives

Recommended Validation Steps

  1. Nomenclature confirmation: Verify if "SSN8" refers to:

    • SS-B (La) autoantibodies associated with Sjögren's syndrome (anti-SS-B prevalence: 19.8% in ELISA/ALBIA screens )

    • Experimental anti-SS-A/Ro clones (e.g., Ro52/Ro60 targets )

  2. Commercial reagent check:

    VendorCatalog SearchResult
    Sino BiologicalAnti-SS-B (La) [Cat#: 11049-MM08]Negative
    MBL Life ScienceIgA/IgG detection kitsNegative
    Thermo FisherCustom antibody portalRequires institutional access

Autoantibody Contextual Data

For reference, characteristics of validated SS-associated antibodies:

ParameterSS-A (Ro60)SS-B (La)
Molecular Weight60 kDa47 kDa
Prevalence in Sjögren's70-95%30-50%
Diagnostic UtilityHigh (ACR/EULAR criteria)Low when isolated
Structural FeaturesRNA-binding proteinPhosphoprotein with RNA chaperone activity

Research Recommendations

  1. Validate target antigen using:

    • Immunoprecipitation with HeLa cell lysates

    • Luminex bead-based assays for autoimmune profiling

  2. Consider NGS-based B-cell receptor sequencing if investigating novel antibody lineages

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
SSN8 antibody; GIG3 antibody; NUT9 antibody; SRB11 antibody; UME3 antibody; YNL025C antibody; N2805RNA polymerase II holoenzyme cyclin-like subunit antibody; Suppressor of RNA polymerase B 11 antibody
Target Names
SSN8
Uniprot No.

Target Background

Function
SSN8 is a component of the SRB8-11 complex. The SRB8-11 complex serves as a regulatory module within the Mediator complex, which itself plays a critical role in regulating both basal and activated RNA polymerase II-dependent transcription. The SRB8-11 complex is potentially involved in the transcriptional repression of a specific set of genes controlled by Mediator. It may hinder the association of the Mediator complex with RNA polymerase II, thereby preventing the formation of the holoenzyme complex. Notably, the SRB8-11 complex phosphorylates the C-terminal domain (CTD) of the largest subunit of RNA polymerase II, RPB1, at serine residues 2 and 5. Furthermore, the SSN3/SRB10 and SSN8/SRB11 kinase-cyclin pair may exert both positive and negative regulatory effects on numerous transcriptional activators in response to fluctuations in nutritional and physiological conditions.
Database Links

KEGG: sce:YNL025C

STRING: 4932.YNL025C

Protein Families
Cyclin family, Cyclin C subfamily
Subcellular Location
Nucleus.

Q&A

What are SS-A and SS-B antibodies and what is their role in autoimmune diagnosis?

SS-A (Ro60) and SS-B (La) antibodies are autoantibodies directed against specific nuclear antigens. They serve as important biomarkers in the diagnosis of Sjögren's syndrome, an autoimmune disorder that primarily affects the exocrine glands, leading to symptoms like dry eyes and dry mouth. These antibodies are detected through blood tests and provide critical immunological evidence for confirming Sjögren's syndrome diagnosis.

Methodologically, these antibodies are typically detected using enzyme-linked immunosorbent assays (ELISA), immunoblotting, or multiplex immunoassays. The presence of these antibodies, particularly anti-SS-A, is not exclusively specific to Sjögren's syndrome but can appear in other autoimmune conditions, requiring careful clinical correlation .

How do seronegative and seropositive Sjögren's disease patients differ clinically?

Seronegative Sjögren's disease (SjD) patients (negative for both SS-A and SS-B antibodies) demonstrate significant clinical differences compared to their seropositive counterparts. Recent research indicates that seronegative patients typically experience:

  • Delayed disease onset by approximately 7.43 years

  • Lower prevalence of parotid gland involvement

  • Different patterns of extra-glandular manifestations

  • Distinct immunological profiles with higher frequencies of CD4+ T cells, CD161+ Tregs, and NK cells

  • Lower frequencies of CD8+ T cells and B cell subsets

  • Lower prevalence of hematological abnormalities (reduced white blood cell counts, hemoglobin levels, and platelet counts)

These differences suggest potentially distinct pathophysiological mechanisms between seronegative and seropositive Sjögren's disease, with a potentially greater role for innate immunity in seronegative patients.

What laboratory tests are typically ordered alongside SS-A/SS-B antibody testing?

When investigating potential Sjögren's syndrome, SS-A/SS-B antibody testing is usually part of a comprehensive autoimmune evaluation. Additional tests commonly ordered include:

  • Antinuclear Antibody (ANA) test: Screens for autoimmune activity and is often positive in Sjögren's syndrome

  • Rheumatoid Factor (RF): Frequently elevated in Sjögren's syndrome patients

  • Complete Blood Count (CBC): Evaluates for cytopenia, which may be more common in seropositive patients

  • Immunoglobulin levels: May show polyclonal hypergammaglobulinemia

  • Complement levels: Can be decreased in active disease

  • Erythrocyte Sedimentation Rate (ESR) and C-Reactive Protein (CRP): Non-specific inflammatory markers

  • Salivary gland biopsy: Histopathological confirmation with focus score determination

This multi-test approach helps establish a complete immunological profile and differentiates Sjögren's syndrome from other autoimmune conditions with overlapping clinical presentations.

How does antibody construction affect structural analysis in research settings?

The structural format of antibodies significantly impacts their utility in research applications, particularly in structural studies using techniques like cryo-electron microscopy (cryo-EM). Recent research investigating neutralizing antibodies demonstrates this principle clearly.

When studying antibody-antigen complexes, researchers encounter challenges with preferred orientations when using traditional Fab fragments. Converting to single-chain variable fragment (scFv) constructs can significantly improve structural analysis results. For example:

  • scFv constructs can prevent preferred orientations induced by Fab fragments

  • The choice between VH-linker-VL (HL) and VL-linker-VH (LH) orientations affects refolding efficiency and yield

  • The typical (GGGGS)₃ linker can provide appropriate flexibility while maintaining antigen binding

These structural considerations are critical for researchers attempting high-resolution characterization of antibody-antigen interactions, particularly when traditional approaches yield suboptimal results due to technical limitations.

What are the immunological implications of SS-A/SS-B double-negative Sjögren's disease?

The subset of Sjögren's disease patients who are negative for both SS-A and SS-B antibodies (approximately 41.3% in recent studies) represents a distinct immunopathological entity. Advanced immunophenotyping reveals:

  • Altered T cell subset distribution with increased CD4+ T cells

  • Significantly higher frequencies of CD161+ regulatory T cells (Tregs)

  • Increased natural killer (NK) cell populations

  • Reduced proportions of CD8+ T cells and various B cell subsets

These findings suggest a potential shift toward innate immunity predominance in these patients, contrasting with the stronger adaptive immune response seen in seropositive cases. This distinction has important implications for:

  • Personalized therapeutic targeting

  • Differential diagnostic approaches

  • Disease progression monitoring

  • Understanding pathophysiological mechanisms in autoimmunity

This research underscores the heterogeneity within Sjögren's syndrome and challenges the one-size-fits-all approach to both research and clinical management.

How do modern antibody generation methods compare to traditional approaches for research applications?

Contemporary antibody generation techniques offer significant advantages over traditional methods, particularly for specialized research applications. The evolution of these methods includes:

Traditional methods:

  • Polyclonal antibody production in rabbits and larger mammals

  • Mouse and rat hybridoma development requiring animal immunization, spleen extraction, and B cell-myeloma fusion

  • Single-cell cloning via limiting dilution to ensure monoclonality

Advanced methods:

  • Single B cell screening technologies that isolate B cells, sequence antibody variable regions, and clone these into mammalian expression systems

  • Phage display libraries allowing in vitro selection without animal immunization

  • Hyperimmune mouse technology leveraging optimized immune responses

Modern approaches offer several research advantages:

  • Accelerated discovery timelines

  • Reduced animal usage

  • Greater epitope diversity

  • Enhanced reproducibility

  • Improved sequence-defined antibodies for structural studies

  • Better targeting of conserved epitopes across species

These methodological considerations are particularly relevant for researchers developing novel antibody-based tools for studying autoantigens like SS-A and SS-B.

What factors affect the long-term detectability of autoantibodies in longitudinal studies?

Understanding autoantibody persistence is critical for designing longitudinal studies of autoimmune conditions. Research on antibody dynamics reveals several key considerations:

  • Different antibody isotypes (IgG, IgM, IgA) demonstrate varied temporal patterns

  • Antibody targets influence persistence (e.g., nuclear antigen-targeting antibodies like SS-A/SS-B typically persist longer than some other autoantibodies)

  • IgA responses may rise more rapidly in early disease stages

  • IgG antibodies, particularly those targeting conserved epitopes, show greater longitudinal stability

  • Sampling intervals must account for potential fluctuations in antibody levels

  • Patient-specific factors including treatment, disease activity, and comorbidities influence antibody trajectories

These dynamics inform optimal study design, particularly for longitudinal research investigating Sjögren's syndrome progression or treatment response.

How should researchers interpret discordant serological results in Sjögren's syndrome studies?

When conducting Sjögren's syndrome research, discrepancies between different serological markers require careful methodological consideration. Researchers should:

  • Evaluate assay characteristics: Different detection methods (ELISA, immunoblotting, immunofluorescence) have varying sensitivities and specificities

  • Consider epitope availability: Conformational changes in antigens can affect antibody binding

  • Assess cross-reactivity: Some autoantibodies demonstrate cross-reactivity with multiple antigens

  • Account for antibody titers: Low-positive results may represent analytical variability rather than clinical significance

  • Incorporate histopathological correlation: Salivary gland biopsy findings provide a gold standard reference

  • Evaluate systemic disease markers: Extra-glandular manifestations and other autoimmune markers help contextualize serological findings

Multimodal analysis integrating clinical, histological, and comprehensive serological data provides the most robust approach to handling discordant results in research settings.

What are the optimal experimental controls for studying SS-A/SS-B antibodies in research settings?

Rigorous control strategies are essential for valid research on SS-A/SS-B antibodies. Comprehensive experimental designs should include:

Positive controls:

  • Validated positive patient samples with known antibody titers

  • Commercial monoclonal antibodies against specific SS-A/SS-B epitopes

  • Reference standard serum from international standardization programs

Negative controls:

  • Age and gender-matched healthy donor samples

  • Disease controls from other autoimmune conditions without SS-A/SS-B positivity

  • Pre-absorption controls using purified antigens

Analytical controls:

  • Isotype controls to assess non-specific binding

  • Serial dilutions to confirm titration behavior and avoid prozone/hook effects

  • Inter-assay calibrators to normalize across experimental runs

  • Epitope blocking studies to confirm specificity

Additionally, researchers should establish assay-specific cut-off values using large healthy control populations (≥100 individuals) to determine specificity, as demonstrated in recent studies evaluating novel antibody detection methods .

How can structural analysis of antibody-antigen complexes inform targeted therapeutics for Sjögren's syndrome?

Advanced structural characterization techniques, including X-ray crystallography and cryo-electron microscopy, provide critical insights that can drive therapeutic development for Sjögren's syndrome. Key research approaches include:

  • Epitope mapping to identify specific binding regions of SS-A/SS-B proteins

  • Analysis of buried surface area (BSA) to quantify the relative contributions of heavy and light chains

  • Investigation of complementarity-determining regions (CDRs) that determine antibody specificity

  • Characterization of framework regions that influence stability and solubility

  • Evaluation of post-translational modifications affecting antigen recognition

These structural investigations can inform:

  • Development of small molecule inhibitors targeting critical epitopes

  • Design of decoy antigens to neutralize pathogenic autoantibodies

  • Engineering of diagnostic antibodies with enhanced specificity

  • Creation of targeted immunomodulatory approaches

The integration of structural biology with immunology represents a frontier in translational research for autoimmune diseases like Sjögren's syndrome.

What emerging technologies are revolutionizing autoantibody research beyond traditional methods?

Several cutting-edge technologies are transforming autoantibody research, offering unprecedented insights into conditions like Sjögren's syndrome:

  • Single-cell RNA sequencing combined with B cell receptor (BCR) repertoire analysis allows identification of autoantibody-producing cells and their transcriptional profiles

  • CRISPR-Cas9 edited cell lines expressing modified autoantigens help pinpoint critical epitopes and binding determinants

  • AI-driven epitope prediction algorithms accelerate identification of immunodominant regions

  • Spatial proteomics techniques visualize tissue distribution of autoantigens and antibody deposition

  • High-throughput autoantigen arrays enable comprehensive autoantibody profiling beyond conventional targets

  • Digital ELISA (single molecule array) technologies provide femtomolar detection sensitivity for low-abundance autoantibodies

These technologies are enabling researchers to address previously intractable questions about the origin, development, and pathogenic mechanisms of autoantibodies in Sjögren's syndrome.

How do genetic factors influence antibody isotype distribution and persistence in Sjögren's syndrome?

Genetic influences on autoantibody characteristics represent an important frontier in Sjögren's syndrome research. Key considerations include:

  • HLA associations: Specific HLA haplotypes correlate with autoantibody production patterns and isotype distribution

  • Fc receptor polymorphisms: Genetic variants affecting antibody clearance influence persistence and tissue deposition

  • Complement gene variants: Alterations in complement activation affect immune complex handling

  • Cytokine gene polymorphisms: Variations in cytokine signaling shape B cell development and antibody class switching

  • Toll-like receptor variants: Modifications in innate immune recognition pathways influence autoantibody development

Research methodologies addressing these genetic factors include:

  • Genome-wide association studies (GWAS) correlating genetic variants with antibody profiles

  • Transcriptomic analysis of antibody-producing cells from genetically diverse patients

  • Functional studies using patient-derived B cells to assess antibody production dynamics

  • Transgenic mouse models incorporating human genetic variants to study autoantibody development

Understanding these genetic determinants may explain the heterogeneity in autoantibody presentation among Sjögren's syndrome patients and inform personalized diagnostic and therapeutic approaches.

Quick Inquiry

Personal Email Detected
Please use an institutional or corporate email address for inquiries. Personal email accounts ( such as Gmail, Yahoo, and Outlook) are not accepted. *
© Copyright 2025 TheBiotek. All Rights Reserved.