STK4 Antibody, FITC conjugated

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Description

Definition and Structure

The STK4 Antibody, FITC conjugated combines a monoclonal or polyclonal antibody targeting STK4 with the FITC fluorophore. This conjugation enables visualization of STK4 in fluorescence-based assays such as immunofluorescence microscopy, flow cytometry, or Western blotting .

Key Components:

  • Antibody Specificity: Targets epitopes on STK4, such as phosphorylation sites (e.g., Thr183) or C-terminal regions .

  • Fluorophore: FITC (excitation/emission maxima: 495/519 nm) .

  • Preservative: Typically contains sodium azide (0.01%) to prevent microbial growth .

Biological Role of STK4

STK4 (also known as MST1) is a serine/threonine kinase critical for immune regulation and apoptosis. Key findings include:

Research Findings:

  • Immune Deficiency: Homozygous mutations in STK4 cause lymphopenia, neutropenia, and recurrent infections due to enhanced mitochondrial membrane potential loss and apoptosis in lymphocytes and neutrophils .

  • Cancer Regulation: STK4 suppresses hepatocellular carcinoma (HCC) by modulating TLR-mediated inflammatory responses in macrophages. Deficiency leads to chronic inflammation and tumorigenesis .

  • Apoptotic Pathways: STK4 exhibits dual roles—proapoptotic via caspase-dependent cleavage and antiapoptotic through FOXO transcription factor phosphorylation .

Table 1: Common Applications and Protocols

ApplicationRecommended DilutionBuffer SystemKey Steps
Immunofluorescence1:500PBS + 10% FBS1-hour incubation in the dark
Western Blotting1:500–1:3000Tris-based buffersSecondary HRP/AP detection required
Flow Cytometry1:100–1:200PBS + 1% BSACombine with viability dyes

Table 2: Epitope Recognition (Hypothetical Example*)

Target RegionSequence (Human STK4)Validation MethodSource
Phospho-Thr183R-N-T(p)-V-IWestern blot, IHC
C-terminalVariableELISA, Immunoprecipitation

*No direct epitope data for FITC-conjugated STK4 exists in provided sources; table extrapolated from unconjugated STK4 antibodies .

Research Case Studies

  • STK4 Deficiency: Western blot analysis using anti-STK4 antibodies confirmed absent protein expression in patients with a homozygous W250X mutation, correlating with immunodeficiency .

  • HCC Mechanisms: STK4 knockdown in macrophages increased IL-6 and TNF-α levels, promoting liver fibrosis and tumorigenesis in mice .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Typically, we can ship your orders within 1-3 business days of receipt. Delivery times may vary depending on the method of purchase and location. Please consult your local distributors for specific delivery times.
Synonyms
Kinase responsive to stress antibody; Krs2 antibody; Mammalian STE20 like protein kinase 1 antibody; Mammalian STE20-like protein kinase 1 antibody; Mammalian sterile 20 like 1 antibody; MST-1 antibody; MST1 antibody; Serine/threonine kinase 4 antibody; Serine/threonine protein kinase Krs 2 antibody; Serine/threonine-protein kinase 4 antibody; Serine/threonine-protein kinase Krs-2 antibody; STE20 like kinase MST1 antibody; STE20-like kinase MST1 antibody; STK4 antibody; STK4_HUMAN antibody; TIIAC antibody; YSK3 antibody
Target Names
Uniprot No.

Target Background

Function
STK4 Antibody, FITC conjugated, targets a stress-activated, pro-apoptotic kinase. Upon caspase cleavage, this kinase translocates to the nucleus, inducing chromatin condensation and internucleosomal DNA fragmentation. It plays a crucial role in the Hippo signaling pathway, regulating organ size and tumor suppression by restricting proliferation and promoting apoptosis. This pathway involves a kinase cascade where STK3/MST2 and STK4/MST1, in complex with SAV1, phosphorylate and activate LATS1/2 in complex with MOB1. This activation leads to phosphorylation and inactivation of the YAP1 oncoprotein and WWTR1/TAZ. Phosphorylation of YAP1 by LATS2 prevents its nuclear translocation, thereby regulating cellular genes crucial for proliferation, death, and migration. STK3/MST2 and STK4/MST1 are essential for repressing mature hepatocyte proliferation, preventing the activation of facultative adult liver stem cells (oval cells), and inhibiting tumor formation. This antibody targets STK4, which phosphorylates 'Ser-14' of histone H2B (H2BS14ph) during apoptosis, and phosphorylates FOXO3 upon oxidative stress, triggering its nuclear translocation and cell death initiation. STK4 also phosphorylates MOBKL1A, MOBKL1B, and RASSF2. It further modifies the binding affinity of TNNI3 (cardiac Tn-I) to TNNC1 (cardiac Tn-C) and TNNT2 (cardiac Tn-T) through phosphorylation. STK4 also phosphorylates FOXO1 on 'Ser-212', regulating its activation and stimulating PMAIP1 transcription in a FOXO1-dependent manner. Furthermore, it phosphorylates SIRT1, inhibiting SIRT1-mediated p53/TP53 deacetylation, thereby promoting p53/TP53-dependent transcription and apoptosis upon DNA damage. STK4 acts as an inhibitor of PKB/AKT1, and phosphorylates AR on 'Ser-650', suppressing its activity by interacting with PKB/AKT1 signaling and antagonizing the formation of AR-chromatin complexes.
Gene References Into Functions
  1. hWW45 is essential for enhancing MST1-mediated apoptosis in vivo and is a critical component of the MST1-driven cell death signaling pathway. PMID: 19212654
  2. MST1-FOXO1 signaling is a key link in survival factor deprivation-induced neuronal cell death. PMID: 19221179
  3. hSav1 is a newly identified protein that interacts with Mst1 and amplifies Mst1-mediated apoptosis. PMID: 19950692
  4. The Mst1-FoxOs signaling pathway provides tolerance to increased levels of intracellular ROS, crucial for maintaining naive T cell homeostasis in the periphery. PMID: 19956688
  5. The identified Mst1 as a binding partner that interacts with PHLPPs both in vivo and in vitro. PHLPPs dephosphorylate Mst1 on the T387 inhibitory site, which activates Mst1 and its downstream effectors p38 and JNK to induce apoptosis. PMID: 20513427
  6. H2AX is a substrate of MST1, functioning to induce apoptotic chromatin condensation and DNA fragmentation. PMID: 20921231
  7. A novel regulatory mechanism involving the phosphorylation of Sirt1 by MST1 kinase leads to p53 activation, providing insights into signaling mechanisms during DNA damage-induced apoptosis. PMID: 21212262
  8. Phage microarrays containing colorectal cancer cDNA libraries were prepared to identify phage-expressed peptides recognized by tumor-specific autoantibodies from patient sera. PMID: 21228115
  9. Mst1 exhibits a growth-promoting activity in HCC cells upon NORE1B downregulation. PMID: 23347832
  10. Mst1 inactivates Prdx1 by phosphorylating it at Thr-90 and Thr-183, leading to an accumulation of hydrogen peroxide in cells. PMID: 23386615
  11. Results suggest that Mst1 coordinately regulates autophagy and apoptosis by phosphorylating Beclin1 and consequently modulating a three-way interaction among Bcl-2 proteins, Beclin1, and Bax. PMID: 24141421
  12. MYC, in concert with EZH2, epigenetically attenuates MST1 expression, suggesting that the loss of MST1/Hippo functions is critical for MYC or EZH2 mediation of cancer cell survival. PMID: 24499724
  13. hMOB3 modulates MST1 apoptotic signaling and supports tumor growth in glioblastoma multiforme. PMID: 24872389
  14. MST1 protein gene expression is a prognostic indicator for patients diagnosed with colorectal cancer. PMID: 24976283
  15. Results suggest that Mst1 regulates the proliferation of glioma cells via the AKT/mTOR signaling pathway. PMID: 25373346
  16. Results suggest that the decreased expression of MST1 in regulatory T cells due to hypermethylation of the promoter contributes to the pathogenesis of IgG4-related AIP. PMID: 26056943
  17. Deacetylation of MST1 mediated by HBXIP-enhanced HDAC6 results in MST1 degradation in a chaperone-mediated autophagy (CMA) manner in promotion of breast cancer growth. PMID: 26657153
  18. Study found that MST1 is strongly activated in a diabetic beta cell and induces not only its death but also directly impairs insulin secretion through promoting proteasomal degradation of key beta cell transcription factor, pancreatic and duodenal homeobox 1 (PDX1), which is critical for insulin production. PMID: 27053234
  19. Mst1-induced defective mitophagy evoked cellular oxidative stress, energy metabolism, and calcium overload. Through excessive mitochondrial fission and aberrant mitophagy, Mst1 launched caspase 9-related mitochondrial apoptosis and abrogated F-actin/lamellipodium-dependent cellular migration. PMID: 29448246
  20. MST1 and hMOB1 signaling controls centrosome duplication. PMID: 19836237
  21. MST1 directly phosphorylated Aurora B and inhibited its kinase activity in vitro; depletion of Aurora B restored the stability of kinetochore-microtubule attachment in cells depleted of MST1 or NDR1. PMID: 20171103
  22. In a yeast two-hybrid screen of a heart cDNA library with Mst1 as bait, glyceraldehyde-3-phosphate dehydrogenase (GAPDH) was identified as an Mst1-interacting protein. PMID: 23527007
  23. Phosphorylated by the MST1. PMID: 23893242
  24. In the present study, we investigated the expression of activated core Hippo pathway kinases (pMST1/2 and pLATS1/2) in a series of 57 HER2-positive and triple-negative breast cancer patients who received neoadjuvant therapy. PMID: 28387539
  25. MST1 plays a tumor suppressive role and is a prognostic factor in human breast cancer. PMID: 23737290
  26. Our data unveiled the role of MST1 as a negative feedback for TGFbeta1 and EGF-regulated endometrial cancer cell invasiveness, migration, and proliferation. PMID: 24841766
  27. Mst1 increases the acetylation of Foxp3 by inhibiting Sirt1 activity, which requires the Mst1 kinase activity. PMID: 26538561
  28. Our results identified that mammalian sterile 20-like kinase 1 is a novel downstream target of pyruvate kinase M2, and knockdown of pyruvate kinase M2 contributes to apoptosis via promoting nuclear translocation of mammalian sterile 20-like kinase 1 by enhancing Caspase-3-dependent cleavage. PMID: 28656802
  29. Mst1 as a novel physiological negative regulator of IRF3 activation provides mechanistic insights into innate antiviral defense and potential antiviral prevention strategies. PMID: 27125670
  30. Data indicate that two siblings with a serine/threonine kinase 4 (STK4) mutation with features of autosomal recessive (AR) hyperimmunoglobulin E syndrome and autoimmune cytopenias. PMID: 26117625
  31. STK4 was reduced in macrophages from human hepatoma patients and was inversely associated with the levels of IRAK1, IL-6, and phospho-p65 or phospho-STAT3. Serum STK4 levels were specifically decreased in HCC patients with high levels of IL-6. PMID: 26457732
  32. The kinase Mst1 controls selective CCR7-dependent functions in human mature dendritic cells. PMID: 26116501
  33. Genetic inactivation of STK4 restores YAP1 levels, triggering cell death in hematologic malignancies. PMID: 24813251
  34. Inhibition of Mst1 kinase activation in cardiomyocytes protects against cell hypoxia. PMID: 23647599
  35. Under diabetogenic conditions, MST1 was strongly activated in beta cells, and induced apoptosis via BIM upregulation, and impaired insulin secretion via phosphorylation of PDX1. PMID: 24633305
  36. PHLPP1 is a binding protein for Mst1 and it modulates the Hippo pathway by dephosphorylating Mst1 at the inhibitory Thr(387) of Mst1. PMID: 24393845
  37. Results indicated that Mst1 might be a promising anticancer target. PMID: 23419720
  38. Low expression of MST1 may be related to the pathogenesis and prognosis of acute leukemia. PMID: 22739148
  39. Data suggest that phosphoinositide-3-kinase/Akt and mammalian target of rapamycin (mTOR) pathway signaling differentially regulate phospho-Mst1-Thr-120/Thr-183. PMID: 22619175
  40. MST1 mutations in autosomal recessive primary immunodeficiency characterized by defective naive T-cell survival. PMID: 22174160
  41. STK4 deficiency is a novel human primary immunodeficiency syndrome. PMID: 22294732
  42. Data indicate that the dimerization domain of MST1 is unstructured as a monomer and undergoes dimerization-induced folding. Data indicate that the inhibitory domain of MST1 is a disordered region both as a single domain and as a construct with a dimerization domain. PMID: 22112013
  43. Results show a novel PRX-I function to cause cell death in response to high levels of oxidative stress by activating MST1, which underlies the p53-dependent cytotoxicity caused by anticancer agents. PMID: 21516123
  44. Findings show a biological role for MICAL-1 in apoptosis and define a novel negative regulatory mechanism of MST-NDR signaling. PMID: 21730291
  45. MST1 was also found in androgen receptor (AR)-chromatin complexes, and enforced expression of MST1 reduced the binding of AR to a well-characterized, androgen-responsive region within the prostate-specific antigen promoter. PMID: 21512132
  46. Studies provide new insights into how MST1 substrate selectivity is modulated with implications for understanding apoptotic signaling through MST1 kinase. PMID: 18510339
  47. These findings indicate that MST1 is a major determinant of RASSF2 protein stability, and suggest that RASSF2 acts in a complex manner that extends beyond simple protein-protein association to play an important role in MST1 regulation. PMID: 19962960
  48. Caspase-catalyzed cleavage and activation of Mst1 correlates with eosinophil but not neutrophil apoptosis. PMID: 11964314
  49. Promotion of MST1-induced apoptosis by DAP4 by enabling colocalization of MST with p53. PMID: 12384512
  50. Mammalian Sterile20-like kinase 1 has a role in the regulation of apoptosis [review]. PMID: 15157167

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Database Links

HGNC: 11408

OMIM: 604965

KEGG: hsa:6789

STRING: 9606.ENSP00000361892

UniGene: Hs.472838

Involvement In Disease
T-cell immunodeficiency, recurrent infections, and autoimmunity with or without cardiac malformations (TIIAC)
Protein Families
Protein kinase superfamily, STE Ser/Thr protein kinase family, STE20 subfamily
Subcellular Location
Cytoplasm. Nucleus. Note=The caspase-cleaved form cycles between the nucleus and cytoplasm.
Tissue Specificity
Expressed in prostate cancer and levels increase from the normal to the malignant state (at protein level). Ubiquitously expressed.

Q&A

What is STK4 and why is it important in immunological research?

STK4 (Serine/Threonine Kinase 4, also known as MST1) is a critical regulatory protein involved in multiple biological processes including:

  • Regulation of cell proliferation, differentiation, and apoptosis in immune cells

  • T cell immunity through TCR-responsive regulation of transcription

  • Formation of a trimolecular complex with Foxp3 and NF-κB p65 to promote Treg cell function

  • Lymphocyte adhesion and trafficking through interaction with the RapL/Rap1 module

STK4 deficiency causes a primary immunodeficiency syndrome characterized by T and B cell lymphopenia, intermittent neutropenia, and atrial septal defects. Patients with STK4 deficiency typically present with recurrent bacterial and viral infections, mucocutaneous candidiasis, cutaneous warts, and skin abscesses . The protein is broadly expressed in hematopoietic cells, particularly monocytes, and is not restricted to lymphocytes .

What are the recommended applications for STK4 FITC-conjugated antibodies?

STK4 FITC-conjugated antibodies are versatile tools with multiple research applications:

ApplicationRecommended DilutionKey Considerations
Flow Cytometry1:50-1:200Reliable for diagnostic screening of STK4 deficiency
Immunofluorescence1:50-1:200Detects both nuclear and cytoplasmic localization
Western Blot1:500-1:2000Can confirm protein expression levels
Immunoprecipitation1:50Useful for protein interaction studies
ELISAOptimized per kitQuantitative measurement of STK4 levels

Flow cytometry has been validated as a rapid and reliable method to detect STK4 protein expression and is qualified as a diagnostic tool to study STK4 deficiency. This approach allows for calculation of ΔMFI/cell values to investigate differences in protein expression among subjects .

How should researchers preserve FITC-conjugated antibody fluorescence intensity?

FITC (Fluorescein Isothiocyanate) conjugated antibodies require special handling to maintain optimal performance:

  • Store at -20°C in the dark with included stabilizers (commonly PBS, 0.02% NaN3, BSA, and 50% glycerol)

  • Do not expose to continuous light as this will cause the FITC-conjugated antibody to gradually lose its fluorescence

  • Avoid repeated freeze-thaw cycles

  • For working solutions, store at 2-8°C for up to 6 months after reconstitution

  • Centrifuge briefly before opening to ensure collection of the entire product

  • Use amber tubes or aluminum foil wrapping during experimental procedures

For long-term storage, aliquoting the antibody into smaller volumes is recommended to minimize freeze-thaw cycles and preserve activity.

What controls are essential when using STK4 FITC-conjugated antibodies?

When conducting experiments with STK4 FITC-conjugated antibodies, the following controls are crucial:

Positive Controls:

  • Cell lines with known STK4 expression (HeLa cells show both nuclear and cytoplasmic expression)

  • Human PBMCs from healthy donors (STK4 is highly expressed)

  • Purified Positope™ control protein for immunoblotting verification

Negative Controls:

  • PBMCs from STK4-deficient patients (for clinical research)

  • Isotype control antibodies of matching IgG subclass (IgG1, IgG2a, or IgG2b)

  • Secondary antibody-only controls for indirect immunofluorescence

Validation Controls:

  • Heterozygous STK4 mutation carriers (show intermediate expression levels)

  • Blocking peptide competition assays

  • siRNA knockdown samples

These controls help establish specificity and minimize the risk of false positive or negative results in experimental protocols.

How can STK4 FITC-conjugated antibodies be optimized for flow cytometry in diagnostic applications?

Flow cytometry has been validated as a reliable method for STK4 protein detection with important optimization considerations:

Protocol Optimization:

  • Isolate PBMCs using density gradient centrifugation

  • Fix cells with 4% paraformaldehyde and permeabilize with appropriate detergent

  • Test different permeabilization reagents (0.1-1% Triton X-100 recommended)

  • Optimize antibody concentration (typically 1:50-1:200 dilution) to maximize signal-to-noise ratio

  • Include established protocols for intracellular staining of other relevant markers

Analysis Parameters:

  • Calculate ΔMFI/cell values to normalize STK4 expression across samples

  • Establish threshold values based on healthy control samples

  • Validate results with Western blotting in parallel

  • Combine with markers for specific lymphocyte subpopulations

In STK4 deficiency diagnosis, flow cytometry data shows reduced STK4 protein expression in the peripheral blood mononuclear cells obtained from all STK4-deficient patients compared to healthy controls . This approach allows for rapid screening of suspected cases before genetic confirmation.

What methodological approaches are recommended for studying STK4 subcellular localization upon T cell activation?

STK4 exhibits dynamic subcellular localization that is critical to its function:

Experimental Design:

  • Stimulate T cells with anti-CD3/CD28 antibodies to activate TCR signaling

  • Collect cells at multiple timepoints (0, 0.5h, 1h, 2h, 4h) to capture translocation dynamics

  • Fix with 4% paraformaldehyde and permeabilize with 1% Triton X-100

  • Stain with STK4 FITC-conjugated antibody and nuclear markers

Advanced Analysis:

  • Use confocal microscopy for high-resolution localization

  • Perform co-localization studies with Foxp3 and NF-κB p65

  • Include the STK4 kinase inhibitor XMU-MP-1 to demonstrate kinase-dependent translocation

  • Compare wild-type STK4 with kinase-dead (K59R) or NLS mutant variants

Research shows that STK4 is predominantly localized to the cytosol in quiescent Treg cells, and stimulation with anti-CD3/CD28 mAbs induces time-dependent translocation into the nucleus as early as 0.5h post-stimulation, where it co-localizes with Foxp3 . This translocation is inhibited by treatment with XMU-MP-1, indicating a kinase activity-dependent mechanism.

How should researchers approach STK4 detection in samples from patients with immune deficiencies?

Detecting STK4 in clinical samples requires specialized approaches:

Multi-modal Assessment:

  • Flow Cytometry Screening:

    • Measure STK4 expression in different immune cell populations

    • Compare with age-matched controls

    • Calculate ΔMFI values to standardize results across laboratories

  • Functional Testing:

    • Assess T cell activation and apoptosis susceptibility

    • Evaluate interferon signaling responses

    • Test neutrophil function and survival

  • Genetic Confirmation:

    • Whole genome or targeted sequencing

    • Sanger sequencing of candidate mutations

    • Analysis of STK4 mRNA expression

When investigating suspected STK4 deficiency, researchers should note that heterozygous carriers display intermediate levels of STK4 protein expression, while homozygous patients show absence or severe reduction of the protein . Complementary approaches include measuring type I/II and III interferon responses to various TLR agonists, as STK4-deficient cells show impaired signaling .

What are the recommended methods for investigating STK4's role in the formation of protein complexes?

To study STK4's interactions with binding partners:

Co-immunoprecipitation Strategy:

  • Stimulate cells with appropriate activators (anti-CD3/CD28 for T cells)

  • Prepare lysates with buffers that preserve protein-protein interactions

  • Immunoprecipitate with anti-STK4 antibody

  • Analyze precipitated complexes for Foxp3 and p65

  • Perform reverse IPs with anti-Foxp3 or anti-p65 antibodies

Validation Approaches:

  • Use HEK293T overexpression systems to confirm direct interactions

  • Test kinase-dead STK4 mutants (K59R) to evaluate kinase-dependency

  • Examine the effect of STK4 phosphorylation on complex formation

  • Study the formation of the trimolecular STK4-Foxp3-p65 complex using sequential IPs

Research has demonstrated that TCR stimulation induces the association of Foxp3 with p65 and also promotes the formation of a larger trimolecular complex including STK4, Foxp3, and p65 . This complex appears to be stabilized by STK4-mediated phosphorylation of Foxp3 on Serine 418, highlighting the importance of STK4's enzymatic activity.

How can researchers evaluate STK4 expression patterns in different disease contexts?

To systematically analyze STK4 expression in disease states:

Tissue Sample Analysis:

  • Perform immunohistochemistry with standardized scoring systems

  • Analyze STK4 expression on a scale: negative (0), low (+/1), medium (++/3), strong (+++/5)

  • Use statistical methods like the Wilcoxon matched-pairs test to calculate significance of differences

  • Correlate expression with clinical parameters (tumor grade, disease stage)

Database Integration:

  • Utilize databases like Oncomine, GTEX Portal, and CCLE for comparative analysis

  • Retrieve survival data from the Human Protein Atlas

  • Perform Kruskal-Wallis test for non-parametric values to correlate with clinical parameters

  • Use GraphPad Prism software for multiple comparisons of nonparametric criteria

For cancer studies, researchers should note that STK4 has been identified as a tumor suppressor in hepatocellular carcinoma, breast cancer, and lymphoma through regulation of cell differentiation and apoptosis . Expression patterns may vary significantly between tumor and normal tissues, offering potential prognostic value.

What technical considerations are important when studying STK4 in neutrophil populations?

Studying STK4 in neutrophils presents unique challenges:

Isolation and Preservation:

  • Use density gradient techniques optimized for neutrophil isolation

  • Process samples immediately to minimize spontaneous apoptosis

  • Include protease inhibitors in all buffers

Functional Assessments:

  • Measure apoptosis rates using Annexin V/PI staining

  • Evaluate mitochondrial membrane potential

  • Assess neutrophil chemotaxis and phagocytic capacity

Species-Specific Considerations:

  • Note that neutrophil STK4 expression differs between humans and mice

  • Human neutrophils express detectable STK4 despite earlier negative reports

  • Species-dependent mechanisms controlling neutrophil viability have been noted in comparative studies

STK4-deficient neutrophils exhibit enhanced loss of mitochondrial membrane potential and increased susceptibility to apoptosis . Intermittent neutropenia observed in STK4-deficient patients may result from increased apoptosis rather than defective production, as bone marrow samples show no evidence of a block in myeloid differentiation .

What approaches are recommended for studying the role of STK4 in interferon signaling pathways?

To investigate STK4's role in interferon responses:

Stimulation Protocols:

  • Stimulate cells with type I IFNs (IFNα/β) at standardized concentrations

  • Include TLR agonists (LPS, poly(I:C)) to assess TLR3/4 pathways

  • Use live viral challenges where appropriate

  • Design time course experiments (2h, 4h, 8h, 24h)

Readout Systems:

  • Measure phosphorylation of TBK1 and IRF3 by immunoblotting

  • Analyze IFN-responsive gene expression by RT-qPCR or RNA-Seq

  • Perform gene enrichment analyses on subsets of IFN-α/IFN-β-responsive genes

  • Use ClueGO and Cytoscape for functional grouped GO and pathway annotation networks

STK4 deficiency leads to dysregulated interferon signaling, particularly defective type I/II and III interferon responses to various TLR agonists, live viruses, and bacterial lysates. This appears to be due to impaired phosphorylation of the kinase TBK1 and the transcription factor IRF3 , which are critical components of the interferon production pathway.

How can researchers differentiate between the pro-apoptotic and anti-apoptotic functions of STK4?

STK4 exhibits context-dependent roles in cellular survival:

Experimental Approaches:

  • For Pro-apoptotic Functions:

    • Monitor STK4 cleavage by caspases (63-kDa → 36-kDa fragment)

    • Track nuclear translocation of the N-terminal fragment

    • Assess histone phosphorylation

    • Examine JNK pathway activation

  • For Anti-apoptotic Functions:

    • Measure mitochondrial membrane potential in STK4-deficient vs. normal cells

    • Assess Annexin V staining and caspase activation

    • Evaluate FOXO signaling pathway components

    • Monitor cell survival over extended culture periods

  • Distinguishing Methods:

    • Use cell-type specific assays (T cells vs. neutrophils vs. monocytes)

    • Compare results in resting vs. activated states

    • Include both early (4-6h) and late (24-48h) timepoints

What are the latest methodological approaches for monitoring STK4 phosphorylation status?

Recent advances in studying STK4 phosphorylation include:

Antibody-Based Methods:

  • Phospho-specific antibodies targeting known STK4 phosphorylation sites

  • Phos-tag™ SDS-PAGE for mobility shift detection

  • Proximity ligation assays for detecting phosphorylated species in situ

Mass Spectrometry Approaches:

  • Targeted phosphoproteomics focusing on STK4 and its substrates

  • SILAC labeling for quantitative assessment of phosphorylation dynamics

  • Parallel reaction monitoring for absolute quantification

Functional Readouts:

  • Monitoring phosphorylation of known substrates (e.g., MOB1)

  • Assessing kinase activity using non-radioactive ATP consumption assays

  • Develop reporter constructs with phosphorylation-dependent localization changes

Research has shown that STK4 phosphorylates Foxp3 on Serine 418, which stabilizes the STK4-Foxp3-p65 complex formation . Similarly, STK4-mediated phosphorylation of other substrates like MOB1 is critical for downstream signaling events . These phosphorylation events represent key regulatory mechanisms that can be monitored to assess STK4 function.

How can multiparameter analysis be optimized when using STK4 FITC-conjugated antibodies?

For complex multiparameter studies:

Panel Design Considerations:

  • Place STK4-FITC appropriately within the panel based on its expression level

  • Consider spectral overlap with other fluorochromes (PE, APC, PerCP)

  • Use compensation controls for each fluorochrome

  • Include viability dyes compatible with fixed/permeabilized cells

Optimization Strategy:

  • Titrate STK4 FITC-conjugated antibody using positive control samples

  • Test different fixation/permeabilization protocols to optimize for all markers

  • Confirm antibody performance in multiplex conditions

  • Include Fluorescence Minus One (FMO) controls for accurate gating

Data Analysis Approaches:

  • Apply dimensionality reduction techniques (tSNE, UMAP)

  • Perform unsupervised clustering to identify cell populations

  • Correlate STK4 expression with other functional markers

  • Normalize expression using reference populations

When designing multiparameter panels, researchers should note that STK4 is expressed at varying levels across immune cell subtypes, with high expression in monocytes and T cells but lower levels in neutrophils . Panel design should account for these differences to ensure adequate sensitivity across all populations of interest.

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