STP22 Antibody

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Description

Structure and Function of STP22

STP22 (Systematic name: Vps22) is a ubiquitin-binding protein essential for reticulophagy, protein targeting, and ATP export in yeast . It functions as a key subunit of the ESCRT-II complex, which regulates endosomal sorting and multivesicular body (MVB) formation. The protein exhibits high homology with mammalian ESCRT-II components, making it a model for studying cellular trafficking pathways .

Epitope Analysis:

  • STP22 antibodies often target the N-terminal region (residues 1–100), which is critical for ESCRT-II assembly .

  • Specificity testing involves Western blotting and immunoprecipitation to confirm cross-reactivity with orthologs (e.g., human VPS22).

Research Applications

The STP22 antibody is widely used in cellular biology and disease modeling. Key applications include:

ApplicationMethodologyOutcome
Endosomal traffickingImmunofluorescence, live-cell imagingVisualizes STP22 localization in endosomes.
MVB formationElectron microscopy, Western blottingAssesses ESCRT-II complex functionality.
Autophagy studiesCo-IP with Atg8 (autophagy marker)Links STP22 to reticulophagy regulation.
Cancer researchFlow cytometry, tumor xenograft modelsExplores STP22’s role in oncogenic signaling.

Therapeutic Potential

While STP22 antibodies are primarily research tools, their therapeutic relevance lies in targeting ESCRT-II dysregulation, observed in:

  • Cancer: Overexpression of STP22 correlates with tumor progression in glioblastoma .

  • Neurodegenerative diseases: ESCRT-II dysfunction is implicated in Alzheimer’s disease and Huntington’s disease .

Mechanism of Action:

  • Inhibition of ESCRT-II disrupts oncogenic signaling pathways (e.g., EGFR recycling).

  • Targeted degradation of STP22 via proteasome inhibitors enhances autophagic flux.

Binding Affinity Analysis

  • Kᵈ (dissociation constant): 1.1 × 10⁻⁹ M (ELISA) .

  • Epitope Mapping: Thr55 and Ser56 residues are critical for antibody recognition .

Immunoprecipitation Results

Protein PartnerInteraction StrengthBiological Context
Vps25HighESCRT-II assembly.
Vps36ModerateCargo recognition.

Challenges and Future Directions

  • Cross-reactivity: STP22 antibodies may bind homologs in other species, requiring stringent specificity testing.

  • Therapeutic translation: Requires optimization for in vivo delivery and reduced immunogenicity.

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
STP22 antibody; VPS23 antibody; YCL008C antibody; YCL8C antibody; Suppressor protein STP22 of temperature-sensitive alpha-factor receptor and arginine permease antibody; ESCRT-I complex subunit VPS23 antibody; Vacuolar protein sorting-associated protein 23 antibody
Target Names
STP22
Uniprot No.

Target Background

Function

Vps23 is a component of the ESCRT-I complex, which plays a crucial role in regulating vesicular trafficking. It functions by binding to ubiquitinated cargo proteins, facilitating their sorting into multivesicular bodies (MVBs) during the endocytic pathway. Vps23 is essential for the association of the ESCRT-I complex with the ESCRT-0 complex. Additionally, it plays a critical role in the vacuolar targeting of temperature-sensitive plasma membrane proteins like STE2 and CAN1.

Gene References Into Functions
  1. The PSDP motifs of the Vps27 ESCRT-0 subunit interact with a unique electropositive N-terminal site on the UEV domain of the ESCRT-I subunit Vps23, centered around Trp16. PMID: 21505419
  2. Research in Saccharomyces cerevisiae has revealed that Rim8 binds to both the putative seven-transmembrane pH sensor Rim21 and the ESCRT-I subunit Vps23. PMID: 20028738
  3. The yeast ESCRT-I complex comprises the Vps23, Vps28, and Vps37 proteins. Its assembly is driven by the C-terminal steadiness box of Vps23, the N-terminal half of Vps28, and the C-terminal half of Vps37. PMID: 16615894
Database Links

KEGG: sce:YCL008C

STRING: 4932.YCL008C

Protein Families
Ubiquitin-conjugating enzyme family, UEV subfamily
Subcellular Location
Cytoplasm. Endosome. Late endosome membrane; Peripheral membrane protein.

Q&A

What is DUSP22/JSP 1 antibody and what are its primary research applications?

DUSP22 (Dual Specificity Phosphatase 22), also known as JSP 1 (JNK Stimulatory Phosphatase 1), is targeted by polyclonal antibodies for research purposes in immunohistochemistry and other applications. The PathPlus™ DUSP22/JSP 1 Polyclonal Antibody (Rabbit anti-Human) is specifically designed for internal immunohistochemistry (IHC) applications . This antibody serves as a valuable tool for studying protein expression patterns and localizing DUSP22 in tissue samples, particularly in human specimens.

Research applications include:

  • Immunohistochemistry (IHC) for tissue localization studies

  • Protein expression analysis in normal and pathological tissues

  • Investigation of signaling pathways involving DUSP22/JSP 1

  • Characterization of phosphatase activity in cellular contexts

The antibody is typically provided at a concentration of 1 mg/ml (50 μg per vial) and should be validated for specific research applications .

How should I design an optimal Western blot experiment using antibodies like DUSP22/JSP 1?

When designing Western blot experiments with DUSP22/JSP 1 or similar antibodies, several critical factors must be considered to ensure experimental success:

Appropriate controls selection: Include both positive and negative controls in your experimental design. Positive controls should be tissues or cell lines known to express the target protein, while negative controls help identify non-specific binding .

Gel selection based on target protein size: Select the appropriate gel percentage based on the molecular weight of your target protein. For optimal resolution of DUSP22/JSP 1 and similar proteins, consider the following guidelines:

Gel TypeProtein Molecular Weight
3-8% Tris-Acetate> 200 kDa
4-20% Tris-GlycineWide range (10-200 kDa)
7.5% Tris-Glycine60-200 kDa
10% Tris-Glycine30-150 kDa
12% Tris-Glycine20-100 kDa
15% Tris-Glycine10-70 kDa

For DUSP22/JSP 1 and other similarly sized proteins, 10-12% Tris-Glycine gels typically provide optimal resolution .

Sample preparation: Ensure proper cell/tissue lysis and protein denaturation. Use established protocols specific to your sample type, and include protease/phosphatase inhibitors if studying phosphorylation status or other post-translational modifications.

Loading control selection: Include appropriate loading controls based on your experimental design, such as GAPDH, β-actin, or α-tubulin to normalize for variations in protein loading.

How can I optimize detection of post-translationally modified proteins when using antibodies?

Post-translational modifications (PTMs) often require specific treatments to enhance detection. When studying phosphorylated, ubiquitinated, or otherwise modified proteins:

Cell treatment optimization: Specific treatments may be needed to activate particular post-translational modifications in your cell model. Consult product webpages or the Control Treatments by Target table from antibody manufacturers for validated positive controls .

Phosphatase inhibitor usage: For phosphorylation studies, include phosphatase inhibitors in your lysis buffer to prevent dephosphorylation during sample preparation.

Enrichment techniques: For low-abundance modified proteins, consider immunoprecipitation before Western blotting to enrich for your protein of interest.

Validation using online resources: Utilize PhosphoSitePlus® to gain insights into modified residues on your target, their functional significance, and published references for treatments that modulate specific post-translational modifications in various cell models .

Modification-specific controls: Include both modified and unmodified protein controls when available to validate antibody specificity for the modified form of your protein.

What are the pharmacokinetic considerations when working with antibodies in tissue-specific contexts?

Recent research reveals important considerations regarding antibody pharmacokinetics (PK) in tissue-specific contexts, particularly relevant when studying antibody penetration into specialized tissues like male reproductive organs:

Tissue-specific distribution variations: Antibody distribution varies significantly across tissues. In male reproductive tissues, antibody exposure is generally lower compared to other organs (except the brain), with exposure levels ranging from 0.5% to 2.6% of plasma concentration .

Anatomical barrier considerations: Specialized barriers like the blood-testis barrier (BTB) significantly impact antibody penetration and exposure. According to recent studies, testis tissue showed approximately 1.7% of plasma antibody exposure, reflecting the restrictive nature of the BTB .

Exposure hierarchy in reproductive tissues: Research data indicates differential exposure across reproductive tissues:

  • Epididymis: 2.57% of plasma exposure

  • Vas deferens: 2.01% of plasma exposure

  • Testes: 1.70% of plasma exposure

  • Seminal vesicle: 0.42% of plasma exposure

  • Prostate gland: 0.52% of plasma exposure

Physiological influences on distribution: Factors affecting antibody distribution include vascular integrity, FcRn expression patterns, tissue lymph flow, and epithelial barrier properties. For example, the moderate expression of FcRn in the blood-testis barrier results in faster elimination of antibodies from testicular tissue compared to the epididymis .

How can I develop a physiologically based pharmacokinetic (PBPK) model for antibody distribution studies?

PBPK modeling provides a powerful approach for characterizing antibody distribution in complex tissues. To develop such models:

Experimental data generation: First conduct biodistribution studies using appropriate animal models. For specialized tissues like reproductive organs, use human FcRn-expressing mice to generate relevant PK data across multiple tissues and time points .

Model structure development: Incorporate detailed anatomical structures and physiological parameters from literature. For specialized compartments like the male reproductive system, include specific subcompartments (e.g., testes, epididymis, vas deferens) with appropriate physiological parameters .

Parameter estimation: Unknown parameters should be estimated using experimental data. Parameters may include:

  • Pinocytosis rates across barriers

  • FcRn binding and recycling rates

  • Transcytosis rates

  • Luminal fluid flow rates

Sensitivity analysis: Conduct local sensitivity analysis by varying each estimated parameter (typically by ±20%) to identify the parameters with the greatest impact on model predictions. In reproductive tissue models, antibody exposure in testes has been shown to be highly sensitive to variations in pinocytosis rates in both the endothelium and blood-testis barrier .

Species scaling: Scale your model to predict antibody disposition in larger species. This involves adjusting physiological parameters according to established allometric relationships while maintaining the core model structure .

What are the critical experimental factors affecting antibody sensitivity and specificity in immunoassays?

Several experimental factors significantly influence antibody performance in immunoassays:

Antibody selection considerations:

  • Polyclonal vs. monoclonal: Polyclonal antibodies like the DUSP22/JSP 1 antibody recognize multiple epitopes, potentially increasing sensitivity but with potential specificity tradeoffs .

  • Species specificity: Ensure the antibody has been validated for your species of interest. The DUSP22/JSP 1 antibody is specifically raised against human targets .

Sample preparation optimization:

  • Fixation methods significantly impact epitope accessibility and antibody binding

  • Antigen retrieval techniques can restore epitopes masked during fixation

  • Blocking protocols must be optimized to reduce non-specific binding

Assay validation requirements:

  • Include appropriate positive and negative tissue controls

  • Verify results with alternative detection methods when possible

  • Consider antibody validation through knockout/knockdown experiments

  • Conduct titration experiments to determine optimal antibody concentrations

How should I troubleshoot unexpected results or inconsistent antibody performance?

When confronting unexpected results with antibodies like DUSP22/JSP 1, implement a systematic troubleshooting approach:

Verification of appropriate positive controls: Ensure you're using validated positive controls. For antibodies like DUSP22/JSP 1, consult the manufacturer's data to identify appropriate positive control tissues or cell lines .

Protocol optimization for your specific sample type: Different tissue types may require modified protocols:

  • Adjust fixation time and conditions

  • Optimize antigen retrieval methods

  • Test different blocking agents

  • Vary antibody incubation times and temperatures

  • Modify wash steps and buffers

Antibody validation strategies:

  • Verify antibody functionality with known positive controls

  • Test different antibody concentrations

  • Consider fresh antibody aliquots if degradation is suspected

  • Evaluate alternative antibody clones targeting different epitopes

Common technical issues and solutions:

  • High background: Increase blocking time/concentration, reduce antibody concentration

  • Weak signal: Increase antibody concentration, extend incubation time, enhance detection system

  • Non-specific binding: Optimize blocking, use more stringent washing, pre-adsorb antibody

What considerations should guide experimental design when studying low-abundance targets?

When investigating low-abundance proteins or tissue-specific variants:

Sample enrichment approaches:

  • Consider subcellular fractionation to concentrate the protein of interest

  • Implement immunoprecipitation prior to Western blotting

  • Employ techniques like proximity ligation assay for increased sensitivity

Signal amplification methods:

  • Utilize more sensitive detection systems (e.g., chemiluminescence, fluorescence)

  • Consider tyramide signal amplification for immunohistochemistry

  • Optimize exposure times for Western blots

Quantification and normalization strategies:

  • Use digital imaging and analysis software for precise quantification

  • Include multiple technical and biological replicates

  • Normalize to appropriate housekeeping proteins or total protein staining

  • Consider absolute quantification methods using recombinant standards

How can antibody pharmacokinetic data be translated from animal models to humans?

Translating antibody PK data from animal studies to humans requires careful consideration of multiple factors:

Species-specific differences: Recent PBPK modeling studies have successfully translated antibody PK data from human FcRn-expressing mice to rats, monkeys, and predicted human values. The translational PBPK model developed for antibodies in male reproductive systems demonstrated that mouse model data could be scaled to larger animals by adjusting key physiological parameters .

Scaling approaches:

  • Allometric scaling: Adjust parameters based on body weight relationships

  • Physiological scaling: Account for species differences in blood flow, tissue composition, and barrier functions

  • FcRn binding: Consider species-specific differences in FcRn binding affinity and expression patterns

Model validation requirements:

  • Validate with data from multiple species when available

  • Confirm predictions with available human data

  • Conduct sensitivity analyses to identify key parameters affecting translation

Clinical implications: Understanding antibody distribution in specialized tissues has important implications for drug development. For example, the observed low yet quantifiable exposure of antibodies in male reproductive tissues suggests potential for both therapeutic applications (e.g., for prostate cancer or infectious diseases) and possible off-target effects that should be evaluated during toxicity studies .

What specialized techniques can improve antibody penetration into tissues with restrictive barriers?

For tissues with restrictive barriers, such as male reproductive tissues with the blood-testis barrier:

Fc engineering approaches:

  • Modify the Fc region to enhance FcRn binding and transcytosis

  • Engineer antibodies with improved pH-dependent binding to FcRn

  • Consider bispecific antibodies that target both the antigen and barrier transporters

Delivery system innovations:

  • Explore nanoparticle-based delivery systems to enhance tissue penetration

  • Investigate local administration routes when applicable

  • Consider temporary disruption of barriers through physical or chemical methods

Pharmacokinetic optimization strategies:

  • Adjust dosing regimen based on tissue-specific half-lives

  • Consider continuous infusion versus bolus dosing

  • Account for tissue-specific clearance mechanisms in dosing calculations

Research has shown that despite restrictive barriers, antibodies can reach male reproductive tissues at measurable levels (0.5-2.6% of plasma concentrations), indicating potential therapeutic applications even in these challenging tissue environments .

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