CENPX Antibody

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Description

Introduction to CENPX Antibody

CENPX is a DNA-binding component of the Fanconi anemia (FA) core complex, essential for resolving interstrand DNA crosslinks and maintaining genome integrity . Antibodies targeting CENPX are polyclonal or monoclonal immunoglobulins designed to detect the protein in experimental systems. These antibodies are widely used in Western blot (WB), immunohistochemistry (IHC), and immunocytochemistry (ICC) applications .

Key Features of CENPX Antibodies:

  • Target Specificity: Recognizes the 9 kDa CENPX protein in human, mouse, bovine, and zebrafish models .

  • Isoform Detection: Capable of identifying up to three reported CENPX isoforms .

  • Clinical Relevance: Used in studying diabetes, genomic instability, and FA-related disorders .

Applications of CENPX Antibodies

CENPX antibodies enable precise detection of the protein in diverse experimental contexts. Their primary applications include:

ApplicationPurposeExample Use Case
Western Blot (WB)Quantify CENPX protein levels in lysates.Validate Cenpx knockdown efficiency in diabetic zebrafish and mouse models .
Immunohistochemistry (IHC)Localize CENPX in tissue sections.Identify nuclear expression patterns in pancreatic β-cells .
Immunocytochemistry (ICC)Visualize CENPX in cultured cells.Track subcellular distribution in DNA repair contexts .

Role in Diabetes and Insulin Regulation

CENPX inhibition has emerged as a potential therapeutic strategy for type 2 diabetes mellitus (T2DM):

  • Mechanism: Cenpx knockdown in zebrafish and mice models reduced fasting blood glucose levels by upregulating insulin synthesis and activating downstream pathways (e.g., mTOR, leptin) .

  • Key Results:

    • Zebrafish Model: CRISPR/Cas9-mediated cenpx knockout restored normal glucose levels in hyperglycemic fish .

    • Mouse Model: siRNA-mediated Cenpx knockdown in NSY/Hos mice reduced fasting blood glucose from 230 mg/dl to 178 mg/dl under high-fat diet conditions .

Genome Stability and DNA Repair

CENPX interacts with FANCM to resolve DNA interstrand crosslinks, but its role in diabetes suggests additional functions:

  • Contradictory Insights: While CENPX is critical for DNA repair, its inhibition in diabetic models improved glucose homeostasis without exacerbating DNA damage . This suggests CENPX may regulate metabolic pathways independently of its repair function.

Centromere and Chromatin Organization

CENPX belongs to the CENP-X/MHF2 family, which binds chromatin and facilitates chromosomal segregation during mitosis. Antibodies have been used to study its subcellular localization and interaction with centromeric proteins .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
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Synonyms
CENP X antibody; CENP-X antibody; CENPX antibody; CENPX_HUMAN antibody; Centromere protein X antibody; FAAP10 antibody; FANCM interacting histone fold protein 2 antibody; FANCM-interacting histone fold protein 2 antibody; Fanconi anemia associated polypeptide of 10 kDa antibody; Fanconi anemia-associated polypeptide of 10 kDa antibody; MGC14480 antibody; Retinoic acid inducible gene D9 protein homolog antibody; Retinoic acid-inducible gene D9 protein homolog antibody; Stimulated by retinoic acid gene 13 protein homolog antibody; STRA13 antibody
Target Names
CENPX
Uniprot No.

Target Background

Function
CENPX is a DNA-binding protein that forms part of the Fanconi anemia (FA) core complex. Its presence is essential for the proper activation of the FA pathway, leading to the monoubiquitination of the FANCI-FANCD2 complex. This process, in turn, facilitates cellular resistance to DNA cross-linking agents and safeguards against chromosomal breaks in response to DNA damage. CENPX, when complexed with CENPS (MHF heterodimer), acts as a crucial cofactor for FANCM, playing a pivotal role in both DNA binding and ATP-dependent DNA remodeling. This complex also stabilizes FANCM. Further, when CENPX joins forces with CENPS and FANCM (excluding other FANC proteins), it rapidly mobilizes to blocked replication forks, promoting gene conversion at these stalled sites. In collaboration with CENPS, CENPT, and CENPW (forming the CENP-T-W-S-X heterotetramer), CENPX participates in the construction of a functional kinetochore outer plate. This structure is indispensable for kinetochore-microtubule attachment, ensuring accurate mitotic progression. As a constituent of the MHF and CENP-T-W-S-X complexes, CENPX binds to DNA, inducing a bend to form a nucleosome-like structure. This DNA-binding activity is contingent upon the presence of CENPS, with a preference for the following DNA substates: Holliday junction > double-stranded > splay arm > single-stranded. Notably, CENPX is unable to bind DNA independently.
Gene References Into Functions
  1. The MHF complex exhibits a preference for branched DNA over double-stranded DNA due to its interaction with two duplex arms. MHF engages DNA forks or various four-way junctions regardless of the junction-site structure. The DNA-binding interface of MHF is crucial for maintaining cellular resistance to DNA damage. PMID: 24390579
  2. CENPX assembly occurs in living human cells during the S phase and G2 phase, revealing a dynamic exchange mechanism where the complex assembles de novo from a soluble precursor. PMID: 24522885
  3. This research explores the biological functions of CENP-S and CENP-X, highlighting how their dual existence might be a common characteristic of CCAN (constitutive centromere-associated network) proteins. PMID: 24256282
  4. Research has identified a long, positively charged patch exposed on the surface of the (MHF1-MHF2) complex that plays a critical role in double-stranded DNA binding to chromatin. PMID: 23886707
  5. This study identified a centromere protein S (CENP-S)-containing subcomplex that includes the newly discovered constitutive kinetochore protein CENP-X [Stra13]. PMID: 19620631
  6. This research identified human and mouse homologs of clone D9 from a murine promyelocyte cell line that was upregulated by retinoic acid. PMID: 8839844

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Database Links

HGNC: 11422

OMIM: 615128

KEGG: hsa:201254

UniGene: Hs.37616

Protein Families
CENP-X/MHF2 family
Subcellular Location
Nucleus. Chromosome, centromere. Chromosome, centromere, kinetochore.

Q&A

What is CENPX and what cellular functions does it regulate?

CENPX (Centromere Protein X) is a critical component of the centromere complex involved in chromosome alignment and segregation during cell division. Research has demonstrated its importance in multiple cellular processes, with recent findings highlighting its unexpected role in metabolic regulation. Studies in diabetes models have shown that CENPX inhibition can ameliorate hyperglycemia and upregulate insulin synthesis, suggesting broader functions beyond its canonical centromere role . Similar to other centromere proteins like CENP-C, CENPX likely contributes to chromosome stability and proper spindle formation during mitosis, though the mechanisms may differ.

What sample types can be analyzed using CENPX antibodies?

CENPX antibodies can be effectively used for analyzing various sample types, primarily human and mouse tissues and cell lines. Based on validated data from related centromere protein antibodies, researchers can successfully detect CENPX in cell lines such as HeLa, A431, and Jurkat cells . For tissue analysis, pancreatic tissues have shown detectable levels of CENPX expression, particularly relevant in metabolic research contexts . When selecting samples, researchers should consider the tissue-specific expression patterns of CENPX, as demonstrated in diabetes research where CENPX knockdown had significant effects in pancreatic tissue but not in liver tissue .

What are the recommended validation techniques for CENPX antibodies?

Validating CENPX antibodies requires multiple complementary approaches to ensure specificity and sensitivity. Standard validation techniques include Western blot analysis to confirm molecular weight (expected around 107 kDa calculated, though observed molecular weights may differ), immunofluorescence to verify subcellular localization at centromeres, and antibody specificity testing using knockout or knockdown controls . For CENPX antibodies, validation in both human and mouse samples is recommended, particularly if conducting comparative studies. Researchers should test antibody reactivity against recombinant CENPX protein and evaluate cross-reactivity with other centromere proteins to ensure specificity. Validation should include positive controls where CENPX expression is known to be high, such as rapidly dividing cell populations.

How do CENPX antibodies compare to other centromere protein antibodies like CENP-C?

While both target centromere proteins, CENPX and CENP-C antibodies differ in several important aspects. CENP-C antibodies have demonstrated remarkable stability and resistance to fixation methods including Carnoy's solution, making them particularly valuable for chromosome spread analysis . CENPX antibodies may not share this same resistance to fixatives, requiring optimization of fixation protocols. In terms of applications, CENP-C antibodies have been extensively validated for immunofluorescence dicentric assay (DCA), whereas CENPX antibodies have shown particular utility in metabolic research contexts . The molecular weight detected also differs significantly, with CENP-C observed at approximately 140 kDa versus the calculated 107 kDa for CENPX . Researchers should select the appropriate centromere protein antibody based on their specific experimental objectives and fixation requirements.

What are the optimal protocols for using CENPX antibodies in chromosome visualization studies?

For chromosome visualization using CENPX antibodies, researchers should employ a modified protocol based on validated centromere protein antibody methods. Begin with cell fixation—while Carnoy's solution (3:1 methanol:acetic acid) works effectively for CENP-C antibodies, CENPX antibodies may require optimization between cold-methanol and Carnoy's fixation . For immunofluorescence:

  • Treat metaphase-arrested cells with hypotonic solution (0.075M KCl) for 20 minutes

  • Fix with selected fixative solution

  • Prepare chromosome spreads on clean glass slides

  • Block with 5% BSA in PBS for 1 hour

  • Incubate with CENPX primary antibody (optimal dilution 1:500-1:1000 based on CENP-C protocols)

  • Wash thoroughly with PBS containing 0.1% Tween-20

  • Apply fluorophore-conjugated secondary antibody

  • Counterstain DNA with DAPI and mount with anti-fade mounting medium

This protocol enables visualization of centromere locations and can be adapted for dicentric chromosome assays similar to those established using CENP-C antibodies .

How can CENPX antibodies be employed in studying diabetes and metabolic disorders?

CENPX antibodies provide valuable tools for investigating the newly discovered role of CENPX in metabolic regulation. For diabetes research applications:

  • Design experiments to correlate CENPX expression with insulin production and glucose regulation

  • Use immunofluorescence with CENPX antibodies in pancreatic tissue sections to examine localization patterns and potential colocalization with insulin-producing cells

  • Combine with siRNA knockdown experiments to validate antibody specificity and correlate protein depletion with metabolic outcomes

  • Employ Western blot analysis of pancreatic tissues to quantify CENPX expression levels across different metabolic states

Research has demonstrated that inhibition of CENPX expression in zebrafish and mouse T2DM models ameliorates hyperglycemia through induction of insulin secretion . CENPX antibodies can help reveal molecular mechanisms underlying this effect, particularly by examining expression patterns in insulin, mechanistic target of rapamycin, leptin, and insulin-like growth factor 1 pathways, which have shown activation following CENPX silencing .

What considerations should be made when using CENPX antibodies in radiation biology research?

When applying CENPX antibodies in radiation biology research, investigators should consider several specialized methodological factors:

  • Dose-response relationship: Establish baseline centromere visualization in non-irradiated controls before examining irradiated samples. CENP-C antibodies have demonstrated dose-dependent changes in dicentric chromosome formation between 1-10 Gy of γ rays, which may inform CENPX study design .

  • Sample preparation timing: Process samples at consistent time points post-irradiation, as radiation effects on centromere proteins may evolve over time.

  • Fixation optimization: Test multiple fixation protocols, as radiation may alter protein antigenicity. While CENP-C maintains antigenicity after Carnoy's fixation post-radiation, CENPX antibodies may require different conditions .

  • Quantification methods: Develop consistent scoring criteria for chromosome abnormalities, particularly if examining radiation-induced dicentric chromosomes. The innovative protocols established for CENP-C-based DCA provide a methodological framework that may be adapted for CENPX studies .

  • Signal intensity analysis: Consider quantitative analysis of fluorescence intensity, as radiation exposure has been shown to cause differences in fluorescence intensity between sister centromeres with CENP-C antibodies .

What protocols are recommended for multiplex immunofluorescence combining CENPX with other centromere markers?

For multiplex immunofluorescence applications combining CENPX with other centromere or chromosomal markers:

  • Antibody compatibility testing: Verify antibody host species compatibility to avoid cross-reactivity between secondary antibodies. If using both CENPX and CENP-C antibodies, select preparations from different host species.

  • Sequential staining protocol:

    • Fix cells/tissues according to optimized protocols

    • Block with 5% normal serum from species unrelated to any antibody hosts

    • Apply first primary antibody (e.g., CENPX) and incubate overnight at 4°C

    • Wash thoroughly and apply corresponding secondary antibody

    • Wash again and block with 5% normal serum

    • Apply second primary antibody (e.g., tubulin for spindle visualization) and repeat detection steps

    • For nuclear counterstaining, use DAPI following all antibody incubations

  • Controls: Include single-stained controls to verify absence of cross-talk between channels.

  • Imaging parameters: Capture images sequentially rather than simultaneously when using multiple fluorophores to minimize bleed-through.

This approach has been validated in studies examining spindle defects and chromosome misalignment, showing that antibodies against centromere proteins can be effectively combined with tubulin labeling to assess both centromere positioning and spindle integrity .

How should researchers interpret unexpected CENPX antibody staining patterns?

When encountering unexpected CENPX antibody staining patterns, consider the following interpretative framework:

  • Non-centromeric nuclear staining: May indicate non-specific binding or previously uncharacterized nuclear functions of CENPX. Validate with alternative antibody lots and knockdown controls.

  • Differential intensity between sister centromeres: Similar to observations with CENP-C, this may reflect biologically relevant asymmetry rather than technical artifact. CENP-C studies have shown that radiation exposure can enhance this difference in fluorescence intensity between sister centromeres .

  • Cell cycle-dependent variations: CENPX localization and abundance may vary throughout the cell cycle. Compare with known cell cycle markers to determine if unexpected patterns correlate with specific cell cycle phases.

  • Tissue-specific patterns: Research on CENPX in diabetes models has revealed tissue-specific effects, with knockdown affecting pancreatic tissue but not liver tissue . Different tissues may exhibit distinct CENPX localization patterns.

  • Methodological considerations: Fixation methods significantly impact centromere protein antibody staining. While CENP-C antigenicity remains after Carnoy's fixation, other centromere proteins like γ-H2AX lose immunoreactivity . Test multiple fixation protocols if unexpected patterns emerge.

What are common causes of false positives and false negatives when using CENPX antibodies?

IssuePotential CausesSolutions
False PositivesCross-reactivity with related centromere proteinsValidate with knockout/knockdown controls; use pre-adsorption tests
Inadequate blockingIncrease blocking duration; test alternative blocking reagents
Secondary antibody cross-reactivityInclude secondary-only controls; use more specific secondary antibodies
False NegativesEpitope masking during fixationTest alternative fixation methods; consider antigen retrieval
Insufficient permeabilizationOptimize detergent concentration and incubation time
Antibody degradationUse fresh aliquots; validate antibody functionality with positive controls
Low expression in sample typeEnrich for mitotic cells where centromere proteins are more abundant

Researchers should implement appropriate controls for each experiment. For CENPX studies, positive controls should include samples with known expression, such as rapidly dividing cell populations, while negative controls should include secondary antibody-only samples and, ideally, CENPX-depleted samples through siRNA knockdown .

How can researchers distinguish between real CENPX signal and background in immunofluorescence assays?

Distinguishing authentic CENPX signal from background requires methodical approach and appropriate controls:

  • Pattern recognition: True CENPX signal should appear as discrete, punctate dots corresponding to centromere locations. The distinctive doubled signals on sister centromeric regions observed with CENP-C can serve as a reference pattern .

  • Colocalization analysis: Perform dual labeling with established centromere markers (e.g., CENP-A or CENP-B) to confirm that CENPX signals colocalize with known centromere sites.

  • Signal-to-noise ratio quantification: Calculate the ratio between centromeric signal intensity and nuclear background. For centromere proteins, this ratio should typically exceed 3:1 for reliable detection.

  • Knockdown validation: Perform parallel staining of wild-type and CENPX-knockdown samples. True CENPX signals should be significantly reduced in knockdown samples, while non-specific background would remain relatively unchanged .

  • Cell cycle analysis: CENPX signals should exhibit characteristic cell cycle-dependent patterns, with potential differences in signal intensity and distribution between interphase and mitotic cells. The persistence of signals throughout all mitotic phases, as demonstrated for CENP-C, can provide reference patterns .

  • Technical controls: Include pre-immune serum controls and peptide competition assays to verify antibody specificity.

What role does CENPX play in oocyte development and how can antibodies help investigate this function?

While specific data on CENPX in oocyte development is limited in the provided search results, related centromere protein research provides a valuable framework. Studies with CENP-C antibodies have demonstrated that centromere proteins play crucial roles in oocyte meiosis. CENP-C antibody immunization studies revealed significant effects on oocyte maturation, with decreased polar body extrusion rates (52.73 ± 2.03% in experimental groups vs. 77.90 ± 1.06% in controls) .

For CENPX investigation in oocyte development:

  • Design immunofluorescence studies examining CENPX localization during oocyte maturation stages

  • Assess potential correlation between CENPX expression patterns and meiotic spindle integrity

  • Implement CENPX knockdown/knockout approaches to determine functional consequences

  • Compare CENPX localization with CENP-C and other centromere proteins to identify unique vs. shared functions

The high percentage of spindle defects (64.67 ± 1.16% vs. 9.27 ± 2.28% control) and chromosome misalignment (50.80 ± 2.40% vs. 8.30 ± 1.16% control) observed with CENP-C antibody treatment suggests centromere proteins are essential for proper chromosome alignment and spindle formation—functions that CENPX may potentially share.

How can researchers effectively analyze spindle formation and chromosome alignment using CENPX antibodies?

To effectively analyze spindle formation and chromosome alignment using CENPX antibodies, researchers should employ multiplex immunofluorescence approaches similar to those validated with other centromere proteins:

  • Multiplex staining protocol:

    • Fix cells/oocytes with methanol or optimized fixative

    • Perform immunolabeling with anti-CENPX antibody for centromeres

    • Co-stain with anti-tubulin antibody for spindle visualization

    • Counterstain with DAPI for chromosome visualization

  • Quantification parameters:

    • Assess spindle morphology, categorizing as normal or abnormal based on established criteria (barrel-shaped vs. elongated or irregular)

    • Evaluate chromosome alignment, scoring as aligned (at equatorial plate) or misaligned

    • Quantify the number and positioning of CENPX signals in relation to the metaphase plate

  • Analysis framework: When analyzing results, consider the following classification system based on CENP-C research findings :

Spindle MorphologyChromosome AlignmentTypical Frequency in ControlIndication
Normal (barrel-shaped)Aligned at equator90.7%Proper centromere function
Abnormal (elongated/irregular)Misaligned64.6% in antibody-treatedCentromere protein dysfunction

This approach can help identify whether CENPX dysfunction specifically affects spindle morphology, chromosome alignment, or both processes, providing insight into its precise role in cell division.

What emerging applications of CENPX antibodies show promise for therapeutic target identification?

The most promising emerging application for CENPX antibodies lies in metabolic disease research, particularly type 2 diabetes mellitus (T2DM). Recent groundbreaking research has identified CENPX as a potential therapeutic target against T2DM through experiments in both zebrafish and mouse models . CENPX antibodies can facilitate:

  • Target validation studies: Using antibodies to confirm knockdown/knockout efficiency in CENPX-targeted therapeutic approaches.

  • Mechanism elucidation: Investigating how CENPX silencing activates insulin, mechanistic target of rapamycin, leptin, and insulin-like growth factor 1 pathways .

  • Biomarker development: Exploring CENPX expression levels as potential biomarkers for diabetes risk or treatment response.

  • Tissue-specific expression profiling: Mapping CENPX expression across tissues to identify optimal therapeutic targeting strategies, particularly given the observed pancreas-specific effects .

  • Combination therapy studies: Investigating how CENPX inhibition might complement existing diabetes treatments.

This represents a paradigm shift in understanding centromere proteins beyond their canonical chromosomal roles, opening new avenues for therapeutic intervention in metabolic disorders.

How can CENPX antibodies contribute to understanding centromere biology in the context of genome stability?

CENPX antibodies offer valuable tools for investigating centromere biology and genome stability:

  • Centromere assembly dynamics: Track CENPX incorporation into centromeric regions across the cell cycle to understand assembly hierarchies and dependencies.

  • Radiation response studies: Similar to CENP-C research showing radiation-induced alterations in centromere fluorescence , CENPX antibodies can help characterize how radiation exposure affects centromere structure and function.

  • Chromosome missegregation analysis: Develop quantitative immunofluorescence assays using CENPX antibodies to detect early signs of chromosome instability in cancer and aging models.

  • Centromere protein interaction network mapping: Use CENPX antibodies for co-immunoprecipitation studies to identify novel protein interactions at centromeres under normal and stressed conditions.

  • Comparative studies across model organisms: Leverage cross-reactivity of CENPX antibodies between human and mouse samples to conduct evolutionary studies of centromere function.

These applications will contribute to a more comprehensive understanding of how centromere dysfunction contributes to diseases characterized by genomic instability, including cancer and developmental disorders.

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