TANK Human

TRAF Family Member-Associated NFKB Activator Human Recombinant
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Description

Molecular Structure and Genetic Encoding

The TANK gene (Chromosome 2, locus 2q24.2) encodes a cytoplasmic scaffold protein composed of 425 amino acids in its longest isoform. Structural studies reveal that TANK lacks enzymatic activity but contains multiple interaction domains, including:

  • A TRAF2-binding motif (residues 118–132)

  • A C-terminal TBK1/IKKε-binding region (residues 274–425) .

TANK forms homodimers and heterodimers with adaptor proteins, enabling its role as a signaling node .

Functional Role in Immune Regulation

TANK modulates NF-κB and interferon regulatory factor (IRF) pathways by interacting with key signaling molecules:

Interaction PartnerFunctional OutcomeMechanistic Impact
TRAF2/3/6Sequesters TRAFs to inhibit canonical NF-κB activationSuppresses TLR/BCR-induced inflammation
TBK1/IKKεFacilitates non-canonical IKK kinase activationEnhances IRF3/7-driven type I IFN production
LMP1 (Epstein-Barr virus)Blocks TRAF2-LMP1 bindingInhibits viral NF-κB activation

TANK deficiency in mice (Tank −/−) leads to:

  • Hyperactive TLR/BCR signaling: Elevated IL-6, TNF-α, and IgG/IgM autoantibodies .

  • Lupus-like autoimmunity: Spontaneous nephritis, splenomegaly, and CD138+ plasma cell expansion .

  • Enhanced TRAF6 ubiquitination: Uncontrolled NF-κB and AP-1 activation .

Research Findings from Knockout Models

Key phenotypes observed in Tank −/− mice:

ParameterWild-TypeTANK-Deficient
Serum IL-6 (post-R848)1.2 ng/mL4.8 ng/mL
Splenic B cells40% CD19+62% CD19+
Autoantibody levelsBaseline6.2-fold increase
Nephritis incidence0%85% by 6 months

These findings underscore TANK’s non-redundant role in restraining excessive immune activation .

Clinical and Therapeutic Implications

Dysregulated TANK expression or function is linked to:

  • Autoimmune diseases: Lupus-like pathologies due to unchecked TLR/BCR signaling .

  • Viral infections: Epstein-Barr virus exploits TANK-TRAF interactions to evade immune detection .

  • Cancer: Overactive TBK1/IKKε in TANK-deficient microenvironments may promote tumor survival .

Pharmacological targeting of TANK-TBK1 interactions (e.g., inhibitors blocking TBK1 activation) is under investigation for autoimmune and inflammatory disorders .

Unresolved Questions and Future Directions

  • How post-translational modifications (e.g., phosphorylation) regulate TANK’s scaffold activity.

  • Tissue-specific roles of TANK in stromal versus immune cells.

  • Potential compensatory mechanisms involving homologous adaptors (e.g., NAP1, SINTBAD).

Product Specs

Introduction
TRAF Family Member-Associated NFKB Activator (TANK) is found in the cytoplasm and interacts with TRAF1, TRAF2, or TRAF3. TANK acts as a regulator of TRAF function by suppressing TRAF protein activity. This is achieved by sequestering TRAFs in an inactive state within the cytoplasm. When overexpressed, TANK inhibits TRAF2-mediated activation of NF-Kappa-B triggered by CD40 and both TNF receptors. Additionally, it inhibits LMP1-mediated NFkappa-B activation by disrupting the interaction between TRAF2 and LMP1.
Description
Recombinant Human TANK protein, expressed in E. coli, is a single, non-glycosylated polypeptide chain consisting of 448 amino acids (residues 1-425). It has a molecular weight of 50.2 kDa. A 23 amino acid His-tag is fused to the N-terminus of TANK. Purification is achieved through proprietary chromatographic techniques.
Physical Appearance
Clear, colorless, and sterile-filtered solution.
Formulation
The TANK protein solution is provided at a concentration of 0.5 mg/ml. The solution contains 20mM Tris-HCl buffer (pH 8.0), 0.2M NaCl, 50% glycerol, and 2mM DTT.
Stability
For optimal storage, keep the TANK protein at 4°C if the entire vial will be used within 2-4 weeks. For prolonged storage periods, freeze the protein at -20°C. To ensure long-term stability during frozen storage, adding a carrier protein such as HSA or BSA to a final concentration of 0.1% is recommended. It's essential to avoid repeated freezing and thawing of the protein.
Purity
The purity of the TANK protein is greater than 85.0% as determined by SDS-PAGE analysis.
Synonyms
TRAF, TRAF2, TRAF-interacting protein, ITRAF.
Source
Escherichia Coli.
Amino Acid Sequence
MGSSHHHHHH SSGLVPRGSH MGSMDKNIGE QLNKAYEAFR QACMDRDSAV KELQQKTENY EQRIREQQEQ LSLQQTIIDK LKSQLLLVNS TQDNNYGCVP LLEDSETRKN NLTLDQPQDK VISGIAREKL PKVRRQEVSS PRKETSARSL GSPLLHERGN IEKTFWDLKE EFHKICMLAK AQKDHLSKLN IPDTATETQC SVPIQCTDKT DKQEALFKPQ AKDDINRGAP SITSVTPRGL CRDEEDTSFE SLSKFNVKFP PMDNDSTFLH STPERPGILS PATSEAVCQE KFNMEFRDNP GNFVKTEETL FEIQGIDPIA SAIQNLKTTD KTKPSNLVNT CIRTTLDRAA CLPPGDHNAL YVNSFPLLDP SDAPFPSLDS PGKAIRGPQQ PIWKPFPNQD SDSVVLSGTD SELHIPRVCE FCQAVFPPSI TSRGDFLRHL NSHFNGET.

Q&A

How should demographic categorization be structured in TANK Human studies?

Demographic categorization in human studies should follow established scientific frameworks while remaining appropriate to your specific research objectives. Standard practice often defines "young" subjects as ages 19-40 years and "older" subjects as 41-79 years, though these boundaries should be justified based on your research questions .

When establishing demographic categories, researchers should:

  • Clearly document and justify age boundaries in methodology sections

  • Consider biological or physiological mechanisms related to demographic factors

  • Ensure sufficient sample sizes within each category for statistical power

  • Account for potential covariates that correlate with demographic variables

For comprehensive demographic documentation, use structured tables:

Demographic CategorySubcategoryParticipantsPercentage
GenderMale1352%
Female1248%
AgeYoung (19-40)1456%
Older (41-79)1144%
EthnicityCaucasian728%
African American624%
Asian624%
Hispanic624%

This demographic structure enables meaningful comparisons while maintaining statistical validity and relevance to existing literature .

What are the standard protocols for obtaining human biological samples in TANK Human research?

When collecting human biological samples for TANK Human research, standardized protocols are essential for ensuring data quality and reproducibility:

  • Obtain IRB approval for all protocols involving human subjects

  • Secure signed consent forms prior to any sample collection

  • Sample from standardized anatomical locations (e.g., upper back and forearm)

  • Use appropriate collection techniques for your target compounds

  • Process samples consistently following validated methodologies

For example, when analyzing volatile organic compounds (VOCs), samples might be concentrated to approximately 50 μL on a rotary evaporator, with 5 μL of each sample then injected into analytical systems such as GC/MS and GC/FPD .

Researchers should document all deviations from standard protocols and maintain consistent processing conditions across all samples to ensure valid comparisons between experimental groups.

What ethical considerations must be addressed when designing TANK Human research studies?

Ethical considerations in TANK Human research must be comprehensively addressed throughout the research process:

  • Obtain Institutional Review Board (IRB) approval for all protocols

  • Develop clear informed consent documents explaining study purpose, procedures, risks, and benefits

  • Implement robust privacy protection and confidentiality measures

  • Provide appropriate subject compensation that is non-coercive

  • Establish special protections for vulnerable populations

  • Design secure data management systems for storing and sharing information

  • Develop protocols for reporting and addressing adverse events

  • Allow participants to withdraw without penalty

As noted in published research, all protocols should be "approved by the University Institutional Review Board (IRB) for Research Involving Human Subjects" with subjects "asked to read and sign IRB-approved consent forms before starting the study protocol" . Documentation of ethical procedures should be maintained throughout the research process and reported in publications.

How should sample pooling be approached in TANK Human studies?

Sample pooling in TANK Human studies requires careful methodological consideration:

  • Determine pooling rationale based on research questions and sample volume constraints

  • Define clear demographic or condition-based categories for pooling

  • Use standardized volumes from each individual sample (e.g., 100 μL from each subject)

  • Ensure thorough mixing of pooled samples (e.g., vortexing) for homogeneity

For example, in studies of volatile organic compounds from human skin, researchers have divided samples into categories like "young male (≤ 40 years), older male (> 40 years), young female (≤ 40 years) and older female (> 40 years)" with equal volumes from each subject placed into the appropriate pool .

While pooling offers advantages for examining group-level differences and compensating for limited sample volumes, researchers should recognize limitations:

  • Loss of individual variation information

  • Potential masking of outliers

  • Reduced ability to detect individual-level correlations

When reporting pooled analyses, clearly document pooling methodology and rationale in research publications.

What are the recommended methods for documenting subject characteristics in TANK Human research?

Comprehensive documentation of subject characteristics is essential for TANK Human research integrity:

  • Collect demographic data through standardized questionnaires

  • Document inclusion/exclusion criteria with clear justification

  • Record relevant physiological parameters using calibrated instruments

  • Maintain detailed records of sampling conditions and methodologies

  • Create a master database linking subject characteristics to sample identifiers

When presenting subject characteristics in publications, use structured tables that include:

  • Sample size calculations and recruitment targets

  • Demographic composition across all relevant variables

  • Physiological parameters relevant to the research question

  • Inclusion/exclusion criteria with numbers of subjects excluded per criterion

  • Statistical comparison of subject groups to verify appropriate matching

This level of documentation enhances reproducibility and enables meaningful interpretation of research findings across different studies .

What experimental design approaches are most effective for TANK Human studies with multiple variables?

For TANK Human studies with multiple variables, structured experimental design approaches enhance both validity and efficiency:

  • Implement a wizard-like tool (such as SMAC system) to systematically guide the experimental process

  • Define up to three critical design factors representing experimental dimensions

  • Structure each factor with characteristics that allow appropriate design generation

  • Incorporate within-cell observations that can be collapsed across sets of observations

The experimental design structure should directly inform:

  • Data collection protocols and variable measurements

  • Statistical analysis approaches appropriate to the design

  • Participant allocation to experimental conditions

  • Sequencing of experimental manipulations

As noted in research on human-in-the-loop simulation studies, the "experimental design wizard" approach allows researchers to "define the various dimensions of the study" in a way that provides "the necessary inputs to create a data collection and analysis structure" .

This systematic approach to experimental design helps researchers avoid common pitfalls and ensures that the resulting data structure is appropriate for statistical analysis.

What methods are most effective for detecting and managing outliers in TANK Human biological samples?

Outlier management in TANK Human biological samples requires a systematic approach:

Detection Methods:

  • Visual inspection of data distributions (boxplots, histograms)

  • Statistical identification using standardized measures

  • Subject-matter expertise to identify biologically implausible values

Investigation Process:

  • Examine potential measurement or recording errors

  • Verify sample handling procedures for each outlier case

  • Consider biological explanations for extreme values

Management Strategies:

  • Implement methods that eliminate "obvious exogenous materials from unwanted sources"

  • Recognize that while tedious, methods that carefully screen for contamination are "far less prone to the influence of outlier values from large exogenous components"

  • Document all outlier investigations and decisions

When analyzing volatile organic compounds, for example, researchers calculate "the relative percentages of selected compounds" after carefully eliminating exogenous materials that could represent outliers .

This balanced approach maintains data integrity while preventing distortion of results from non-representative extreme values.

How can researchers validate the effectiveness of an experimental design in TANK Human studies?

Validating experimental design effectiveness in TANK Human studies requires a comprehensive approach:

Design Validation:

  • Use structured experimental design tools to generate appropriate designs

  • Limit experimental dimensions to a manageable number (typically three or fewer)

  • Define clear factor characteristics for design generation

  • Ensure the design addresses the primary research questions

Implementation Validation:

  • Facilitate "coordination and communication between the experimental design and simulator operator"

  • Verify that all necessary components are available before study initiation

  • Track which subjects have completed which conditions

  • Confirm data collection quality throughout the study

Analysis Validation:

  • Conduct both automated and manual data analysis

  • Verify statistical assumptions appropriate to the chosen analyses

  • Ensure analyses match the experimental design structure

  • Document all analysis decisions and procedures

Reporting Validation:

  • Generate structured reports following standardized templates

  • Include comprehensive documentation of methods and results

  • Supplement with additional analyses as warranted by findings

This validation approach helps "avoid some design pitfalls" while ensuring rapid and accurate execution of the experimental protocol .

What approaches should researchers use to investigate potential contaminants in TANK Human biological samples?

Investigating potential contaminants in TANK Human biological samples requires systematic detection and elimination approaches:

Prevention Strategies:

  • Implement standardized collection protocols with appropriate controls

  • Use reference samples to establish baseline measurements

  • Document potential environmental contaminant sources

Detection Methods:

  • Apply specialized analytical techniques like gas chromatography with flame photometric detection (GC/FPD) for sulphur compounds

  • Monitor known contaminant markers in samples

  • Compare test samples against blank controls

Elimination Approaches:

  • Develop methods that are "far less prone to the influence of outlier values from large exogenous components"

  • Ensure "all obvious exogenous materials from unwanted sources are eliminated"

  • Apply compound-specific analytical techniques for suspected contaminants

Analysis Considerations:

  • Calculate relative percentages of compounds after contaminant elimination

  • Examine differences in compound profiles between demographic groups

  • Document all contaminant identification and elimination procedures

For example, when analyzing volatile organic compounds from human skin, researchers might focus on specific compounds like "dimethylsulphone, benzothiazole, C8-C10 aldehydes" and others, while carefully eliminating exogenous contaminants .

This systematic approach enhances the validity of biological sample analysis by distinguishing endogenous compounds from contaminants.

How should researchers structure the experimental process in TANK Human studies to ensure validity and reproducibility?

Structuring the experimental process in TANK Human studies requires a comprehensive framework:

Experimental Design Phase:

  • Implement "an experimental process wizard that guides the user through the process of designing, configuring, running, analyzing, and reporting"

  • Define experimental dimensions and factor characteristics

  • Determine appropriate statistical analyses that match the design

  • Document all design decisions in standardized formats

Experiment Configuration:

  • Configure experimental conditions based on the design

  • Establish data collection protocols and measurement techniques

  • Create standardized scripts for participant instructions

  • Develop quality control procedures for data verification

Experiment Execution:

  • Determine "in what order to run subjects and which experimental conditions should be used for each run"

  • Track participant progress through the experimental protocol

  • Verify data quality throughout the collection process

  • Document any deviations from planned procedures

Data Analysis:

  • Initiate "statistical data analysis and review the results"

  • Perform both automated analyses matching the experimental design

  • Conduct "ad hoc analyses as desired" to explore unexpected findings

  • Generate standardized analysis outputs for reporting

Reporting:

  • Create structured reports using standardized templates

  • Include comprehensive documentation of methods and results

  • Export results "to a document along with other template report sections"

  • Ensure complete documentation of all methodological decisions

This structured approach provides "a common point of reference and indicates the status of the experiment," enhancing both validity and reproducibility .

What methods should researchers use to analyze variations in TANK Human biological compounds across demographic groups?

Analyzing variations in TANK Human biological compounds across demographic groups requires systematic analytical approaches:

Sample Preparation:

  • Pool samples strategically by demographic characteristics (age, gender, ethnicity)

  • Use standardized volumes from each subject (e.g., 100 μL per subject)

  • Process samples consistently to minimize methodology-based variations

Compound Selection:

  • Identify target compounds through initial screening of chromatograms

  • Select compounds that "appeared to vary in many chromatograms"

  • Include compounds with known biological significance (e.g., dimethylsulphone as "a well-known metabolite in human body fluids")

Analysis Methods:

  • Calculate relative percentages of selected compounds for each demographic group

  • Examine differences related to age, gender, and anatomical location

  • Apply statistical tests appropriate to the data distribution and study design

  • Visualize variations through comparative chromatograms or concentration tables

Interpretation Framework:

  • Consider biological significance of observed variations

  • Relate findings to existing literature on metabolite differences

  • Acknowledge limitations in sample pooling and compound selection

  • Propose mechanisms for observed demographic differences

For example, researchers analyzing volatile organic compounds from human skin found that compounds like "benzothiazole, methoxy acetic acid dodecyl ester and isopropyl palmitate" showed differences "attributed to age or emanation site" .

This systematic approach allows researchers to identify meaningful biological variations across demographic groups while maintaining methodological rigor.

Product Science Overview

Definition and Classification

TANK is classified as a protein-coding gene and is associated with several biological pathways, including the Toll-Like Receptor 3 (TLR3) Cascade and the TNFR1 Pathway . It is involved in the activation of the NF-κB (Nuclear Factor kappa-light-chain-enhancer of activated B cells) signaling pathway, which is essential for immune response regulation .

Biological Properties

TANK is known for its role in modulating the activity of TRAF proteins, which are critical mediators in the NF-κB signaling pathway. This pathway is vital for the regulation of immune responses, inflammation, and cell survival .

Expression Patterns and Tissue Distribution

The expression of TANK is observed in various tissues, with significant expression in immune-related tissues. It is involved in the regulation of immune responses and is associated with diseases such as Nipah Virus Encephalitis and Spinocerebellar Ataxia 20 .

Biological Functions

TANK functions as a regulator of TRAF proteins, influencing the NF-κB signaling pathway. This regulation is crucial for maintaining the balance of immune responses and preventing excessive inflammation .

Modes of Action

TANK interacts with TRAF proteins to modulate their activity and influence the NF-κB signaling pathway. This interaction is essential for the proper functioning of immune responses and the prevention of inflammatory diseases .

Regulatory Mechanisms

The activity of TANK is regulated through its interactions with TRAF proteins and other components of the NF-κB signaling pathway. These interactions ensure the proper regulation of immune responses and the prevention of excessive inflammation .

In summary, TRAF Family Member-Associated NFKB Activator (Human Recombinant), or TANK, is a critical protein involved in the regulation of immune responses and inflammation. Its role in the NF-κB signaling pathway highlights its importance in maintaining immune system balance and preventing inflammatory diseases.

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