TUBA1 Antibody

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Description

TUBA1A Protein and Its Biological Significance

TUBA1A (Tubulin Alpha-1A Chain) is encoded by the TUBA1A gene and constitutes the predominant α-tubulin isoform in the developing human brain. It forms heterodimers with β-tubulin to assemble microtubules, which are vital for:

  • Neuronal migration and cortical layering during brain development .

  • Axonal growth and commissure formation .

  • Intracellular transport, cell division, and cytoskeletal integrity .

Mutations in TUBA1A disrupt microtubule function, leading to tubulinopathies such as lissencephaly, microcephaly, and intellectual disability .

Development and Validation of TUBA1A Antibodies

TUBA1A antibodies are designed to distinguish TUBA1A from other α-tubulin isoforms (e.g., TUBA1B, TUBA1C) due to high sequence homology. Key features include:

PropertyDetails
Epitope SpecificityTargets unique regions (e.g., C-terminal peptides) to avoid cross-reactivity .
Host SpeciesRabbit, mouse, or rat .
ApplicationsWestern blot (WB), immunofluorescence (IF), immunohistochemistry (IHC), ELISA .
ReactivityHuman, mouse, rat, chicken, cow, and zebrafish .

Examples of Commercial Antibodies:

  • ab95966 (Abcam): Rabbit polyclonal antibody validated in WB and IF, detecting a 50 kDa band .

  • MACO0009 (Assay Genie): Mouse monoclonal antibody for human samples, optimized for WB and IP .

  • YL1/2 (Thermo Fisher): Binds tyrosylated α-tubulin, serving as a loading control .

3.1. Neurodevelopmental Studies

  • Neurite Outgrowth: TUBA1A knockdown in mice impairs neurite extension and growth cone dynamics, linked to MAP1B mislocalization .

  • Commissure Defects: Tuba1a<sup>N102D</sup> mutants exhibit normal cortical layering but fail to form axon commissures .

3.2. Disease Mechanisms

  • Tubulinopathies: Antibodies identify pathogenic mutations (e.g., R402C, L397P) that disrupt tubulin folding or microtubule assembly .

  • Apoptosis: Codon-modified Tuba1a alleles increase cortical apoptosis, correlating with severe neurodevelopmental phenotypes .

3.3. Technical Advancements

  • Tagging Methods: Novel TUBA1A-His6 tools enable live visualization of microtubule incorporation without functional impairment .

  • Post-Translational Modifications: Antibodies detect detyrosination or polyglutamylation, critical for neuronal microtubule specialization .

Comparative Analysis of TUBA1A Isoforms

TUBA1A shares high homology with other α-tubulins but has unique functional domains:

GeneIdentity to TUBA1AC-Terminal SequenceMouse Ortholog
TUBA1A100%MAALEKDYEEVGVDSVEGEGEEEGEEYTuba1a
TUBA1B99.3%MAALEKDYEEVGVDSVEGEGEEEGEEYTuba1b
TUBA4A96%MAALEKDYEEVGIDSYEDEDGEETuba4a
Data adapted from Keays et al., 2017 .

Challenges and Considerations

  • Cross-Reactivity: Antibodies may bind non-target tubulins due to sequence similarity .

  • Validation: Knockout controls or isoform-specific peptides are critical to confirm specificity .

  • Storage: Sodium azide-containing buffers require careful handling .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
TUBA1 antibody; TUA1 antibody; At1g64740 antibody; F13O11.5 antibody; Tubulin alpha-1 chain antibody
Target Names
TUBA1
Uniprot No.

Target Background

Function
Tubulin is the primary component of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
Gene References Into Functions
  1. These findings, along with the three-dimensional location of the phosphorylation site, suggest that microtubules undergo depolymerization in response to hyperosmotic stress through alpha-tubulin phosphorylation. PMID: 23628996
Database Links

KEGG: ath:AT1G64740

STRING: 3702.AT1G64740.1

UniGene: At.27012

Protein Families
Tubulin family
Subcellular Location
Cytoplasm, cytoskeleton.

Q&A

TUBA1A Antibody: Academic Research FAQs

Advanced Research Questions

How can I resolve discrepancies in TUBA1A antibody specificity across isoforms?

  • Challenge: TUBA1A shares >90% sequence homology with other α-tubulin isoforms (e.g., TUBA3, TUBA1B) .

  • Solutions:

    • Knockdown Validation: Use siRNA targeting TUBA1A in HEK-293T cells to confirm band loss at ~50 kDa .

    • Post-Translational Modification (PTM) Analysis: Employ antibodies targeting PTM-specific epitopes (e.g., acetyl-K40 in ab95966 ).

    • Cross-Reactivity Testing: Compare reactivity in lysates from organisms lacking TUBA1A (e.g., Drosophila melanogaster ).

What methodologies validate TUBA1A’s role in neuronal development using antibody-based assays?

  • Functional Assays:

    • Neurite Outgrowth: Quantify microtubule stability in TUBA1A-deficient neurons using IF .

    • Axon Guidance Defects: Combine antibody staining (e.g., acetylated tubulin) with CRISPR-Cas9 mutants to assess commissure formation .

  • Data Interpretation:

    • Unexpected Bands: Non-specific binding at ~25 kDa may indicate degradation; include protease inhibitors and validate with fresh lysates .

Methodological Troubleshooting

How should I address non-specific binding in TUBA1A immunohistochemistry (IHC)?

  • Blocking: Use 5% BSA with 0.3% Triton-X 100 to reduce background .

  • Antigen Retrieval: Optimize heat-mediated retrieval (pH 6.0 citrate buffer) for formalin-fixed brain tissues .

  • Validation Table:

    Tissue TypeAntibody DilutionSignal Specificity
    Human Brain2.5 μg/mL High (cytoplasmic)
    Mouse Cortex1:500 Moderate (nuclear excluded)

Data Contradiction Analysis

Why do TUBA1A expression levels vary between qPCR and Western blot data?

  • Transcript vs. Protein Stability: mRNA levels (e.g., TNFRSF12A in scleroderma ) may not correlate with protein due to translational regulation.

  • Antibody Sensitivity: Compare multiple antibodies (e.g., ab95966 vs. A03989) and confirm with mass spectrometry .

  • Normalization Errors: Re-express data relative to both GAPDH (mRNA ) and β-actin (protein ).

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