tbb-4 Antibody

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Description

Target Overview: TBB-4 Protein

TBB-4 is a β-tubulin isotype with distinct expression patterns across species:

  • In C. elegans: TBB-4 is expressed in ciliated sensory neurons and contributes to axonemal microtubule stability. It shows inefficient incorporation into mitotic spindles, suggesting specialized roles in sensory neuron function .

  • In Humans: The homologous protein, TUBB4A (tubulin beta 4A class IVa), is implicated in neurodevelopment and microtubule dynamics. Mutations in TUBB4A are linked to neurological disorders like hypomyelinating leukodystrophy .

Key Findings in C. elegans

  • Expression Localization: TBB-4 is enriched in ciliated neuron precursors and axonemes, with expression initiating during embryogenesis .

  • Functional Role: Collaborates with MAPH-9 to stabilize axonemal microtubule doublets, critical for sensory neuron integrity .

Relevance in Human Studies

  • Neurological Disorders: TUBB4A mutations disrupt microtubule networks, leading to impaired neuronal myelination .

  • Diagnostic Potential: Anti-β-tubulin antibodies (e.g., anti-TBB5 in autoimmune hepatitis) highlight tubulin’s immunogenic role, though TBB-4-specific autoantibodies remain underexplored .

Comparative Analysis of β-Tubulin Isotypes

IsotypeSpeciesExpression SiteFunctional Role
TBB-4C. elegansCiliated sensory neuronsAxonemal stability, sensory signaling
TUBB4AHuman/MouseNeurons, glial cellsMicrotubule dynamics, neurodevelopment

Technical Considerations

  • Cross-Reactivity: Anti-TBB4A antibodies may require validation in species-specific contexts due to sequence variations .

  • Limitations: No commercial images or in vivo functional data are publicly available for A05184, necessitating user validation .

Future Directions

  • Mechanistic Studies: Explore TBB-4’s role in microtubule-regulated processes like intracellular transport.

  • Therapeutic Targets: Investigate TUBB4A mutations in neurological diseases for drug development.

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
tbb-4 antibody; B0272.1 antibody; Tubulin beta-4 chain antibody; Beta-4-tubulin antibody
Target Names
tbb-4
Uniprot No.

Target Background

Function
Tubulin is the primary component of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
Gene References Into Functions
  1. Continuous transport of sub-stoichiometric quantities of these TBB-4/TBA-5 subunits by the kinesin-2 dependent intraflagellar transport machinery maintains sensory cilia at their steady-state length. PMID: 21642982
Database Links

KEGG: cel:CELE_B0272.1

STRING: 6239.B0272.1

UniGene: Cel.7465

Protein Families
Tubulin family
Subcellular Location
Cytoplasm, cytoskeleton.

Q&A

Here’s a structured, research-focused FAQ for TBB-4/TBB5 antibodies based on current scientific literature and patents:

How to validate TBB-4 antibody specificity in experimental models?

  • Methodology:

    • Perform Western blotting using recombinant human TBB5 expressed in E. coli or CHO cells (as in autoimmune liver disease studies) .

    • Include controls with lysates from HEK293 and HCC2429 cells to assess cross-reactivity with related isoforms (e.g., tubulin β-1/β-3) .

    • Validate via immunoprecipitation with HL-60 or Chang liver cell-purified tubulin, comparing reactivity between autoimmune liver disease (AIH, PSC) and healthy samples .

What are the primary applications of TBB-4 antibodies in disease research?

  • Key applications:

    • Autoimmune hepatitis (AIH) diagnostics: Detect IgG anti-TBB5 in 68% of untreated AIH patients (vs. 3% in healthy controls) .

    • Mechanistic studies: Investigate tubulin’s role in neutrophil cytoplasmic antibody (pANCA)-associated pathologies .

    • Kinase inhibition assays: Assess CDK9 inhibitor effects on BRD4 phosphorylation in cancer models (e.g., NUT midline carcinoma) .

How to optimize TBB-4 antibody protocols for immunohistochemistry?

  • Recommendations:

    • Use formalin-fixed paraffin-embedded (FFPE) tissues with antigen retrieval (citrate buffer, pH 6.0).

    • Validate staining patterns in AIH liver biopsies vs. alcohol-associated liver disease (ALD) to distinguish disease-specific tubulin epitopes .

How to resolve contradictions in TBB-4 antibody reactivity across studies?

  • Analysis framework:

    FactorImpact on ReactivityExample Data
    Epitope accessibilityPost-translational modifications (e.g., GTP-binding regions) alter bindingAnti-TBB5 IgG in AIH: 68% vs. PBC: 14%
    Species specificityRecombinant human TBB5 vs. porcine homologsReduced cross-reactivity in CHO-expressed TBB5
    Sample cohortsDisease stage (untreated vs. treated AIH)Treated AIH: 12% reactivity

What mechanistic insights can TBB-4 antibodies provide in transcriptional regulation?

  • Experimental design:

    • Use coimmunoprecipitation to study BRD4-CDK9-cyclin T1 interactions in NUT midline carcinoma (e.g., HCC2429 cells) .

    • Quantify BRD4 phosphorylation inhibition via TBB-4 antibody-blocking assays (IC50 values for CDK9 inhibitors: Flavopiridol > DRB > TBB) .

How to address non-specific binding in TBB-4 antibody assays?

  • Strategies:

    • Preabsorb sera with recombinant FtsZ (bacterial homolog) to rule out cross-reactivity .

    • Combine ELISA (IgG/IgA isotype analysis) and mass spectrometry to identify contaminating antigens (e.g., cytokeratins) .

Table 1: Prevalence of Anti-TBB5 Antibodies in Liver Diseases

Disease CohortIgG Reactivity (%)IgA Reactivity (%)Key Association
Untreated AIH6811Diagnostic marker
PSC with UC4013Predicts PSC in UC patients
ALD1839Alcohol-induced mucosal leakage

Critical Considerations for Researchers

  • Antibody validation: Always compare recombinant (e.g., E. coli-expressed) vs. native tubulin sources to confirm epitope integrity .

  • Disease specificity: Anti-TBB5 IgG is AIH-predominant, while IgA correlates with ALD, suggesting distinct induction pathways .

  • Kinase assays: Use recombinant CDK9-cyclin T1 complexes to study TBB-4’s role in BRD4 hyperphosphorylation .

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