TMN3 Antibody

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Description

Overview of TIM-3

TIM-3 is a 60 kDa type I transmembrane glycoprotein belonging to the TIM family. It consists of:

  • Extracellular domain (ECD): IgV-like domain and mucin stalk (181 amino acids in humans) .

  • Transmembrane domain: 21 amino acids .

  • Cytoplasmic tail: 78 amino acids with conserved tyrosine phosphorylation motifs .

Key isoforms: A truncated splice variant lacks the cytoplasmic domain, potentially functioning as a soluble decoy receptor .

Functional Mechanisms

TIM-3 regulates immune responses by interacting with ligands:

LigandRole in TIM-3 SignalingBiological Impact
Galectin-9Induces apoptosis via TIM-3 phosphorylationSuppresses Th1/Tc1 cells
Phosphatidylserine (PtdSer)Mediates phagocytosis of apoptotic cellsPromotes immune tolerance
CEACAM1Homophilic interaction with TIM-3Inhibits T-cell activation
HMGB1Blocks DNA-mediated TLR activationReduces inflammation

Blocking TIM-3 enhances IFN-γ production, T-cell cytotoxicity, and anti-tumor immunity .

Key TIM-3 Antibodies in Development

Therapeutic antibodies targeting TIM-3 aim to disrupt ligand interactions and reverse T-cell exhaustion:

Antibody NameKey FeaturesDevelopment Stage
M6903Blocks PtdSer, CEACAM1, and Gal-9; enhances T-cell activation with anti-PD-1/PD-L1 Preclinical (huTIM-3-KI mice)
IBI104High affinity (KD = 0.1 nM); induces receptor internalization; synergizes with anti-PD-1 Phase I/II trials (NCT03744468)
TIM3-R53Single-domain antibody; boosts CAR T-cell efficacy in vivo Preclinical (mouse models)
Sym023Ligand-blocking; prioritizes PtdSer and CEACAM1 inhibition Early-phase clinical trials

Clinical Relevance

  • Cancer: TIM-3 is upregulated in PD-1-resistant tumors and correlates with poor prognosis in lung adenocarcinoma and melanoma .

  • Autoimmunity: TIM-3 blockade exacerbates experimental autoimmune encephalomyelitis (EAE) in mice .

  • Combination Therapy: Co-blockade of TIM-3 and PD-1/PD-L1 shows enhanced anti-tumor efficacy in preclinical models .

Challenges and Future Directions

  • Ligand Redundancy: TIM-3 binds multiple ligands, necessitating antibodies that block all interfaces .

  • Biomarker Development: No companion diagnostics are approved; research focuses on TIM-3/PD-1 co-expression as a predictive marker .

  • Safety: Early-phase trials report acceptable toxicity, but long-term effects remain uncharacterized .

Product Specs

Buffer
Preservative: 0.03% ProClin 300; Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
14-16 week lead time (made-to-order)
Synonyms
TMN3 antibody; EMP9 antibody; At2g01970 antibody; F14H20.4 antibody; Transmembrane 9 superfamily member 3 antibody; Endomembrane protein 9 antibody; Transmembrane nine protein 3 antibody; AtTMN3 antibody
Target Names
TMN3
Uniprot No.

Target Background

Database Links

KEGG: ath:AT2G01970

STRING: 3702.AT2G01970.1

UniGene: At.48409

Protein Families
Nonaspanin (TM9SF) (TC 9.A.2) family
Subcellular Location
Endosome membrane; Multi-pass membrane protein. Golgi apparatus membrane; Multi-pass membrane protein.

Q&A

FAQs for TIM-3 Antibody Research (Academic Focus)
Note: "TMN3" is presumed to refer to TIM-3 (T-cell immunoglobulin and mucin-domain containing-3), an immune checkpoint target. Corrections are based on contextual analysis of provided sources.

What experimental models are appropriate for validating TIM-3 antibody efficacy in cancer immunotherapy?

TIM-3 antibodies require validation in models that replicate human immune-tumor interactions:

  • Syngeneic mouse models (e.g., MC38 colorectal cancer) to study endogenous T-cell modulation .

  • Humanized PBMC or CD34+ models for evaluating human-specific TIM-3 interactions .

  • Ex vivo tumor-infiltrating lymphocyte (TIL) assays to assess functional reinvigoration of exhausted T-cells .

Key controls:

  • Isotype-matched antibodies to rule out non-specific effects.

  • TIM-3 knockout models to confirm target specificity .

How do TIM-3 antibodies differ mechanistically from PD-1/PD-L1 inhibitors?

TIM-3 antibodies target distinct pathways in T-cell exhaustion:

FeatureTIM-3 AntibodiesPD-1/PD-L1 Inhibitors
Primary mechanismBlockade of galectin-9 interactionDisruption of PD-1/PD-L1 binding
Co-expressionOften co-expressed with PD-1 on exhausted T-cellsRarely co-expressed with TIM-3
Tumor microenvironment impactReduces myeloid-derived suppressor cell recruitmentPrimarily enhances cytotoxic T-cell activity

Source: Preclinical data showing TIM-3's role in myeloid cell modulation .

How can conflicting TIM-3 expression data across cancer subtypes be resolved methodologically?

Discrepancies often arise from:

  • Antibody validation: Use ≥2 clones (e.g., clone 344823 vs. R&D Systems F38-2E2) with orthogonal validation (flow cytometry, RNAscope) .

  • Tumor heterogeneity: Multi-region sampling and single-cell RNA sequencing to account for spatial variability .

  • Post-translational modifications: Glycosylation status of TIM-3 affects antibody binding; employ enzymatic pretreatment (neuraminidase) in IHC .

Example workflow:

  • Validate antibodies using TIM-3-transfected cell lines vs. knockout controls.

  • Correlate protein expression with RNA-seq data from TCGA.

  • Use mass spectrometry to confirm glycosylation patterns .

What strategies optimize TIM-3 antibody engineering for enhanced Fc effector function?

Rational engineering approaches include:

  • Fc domain modifications:

    • S239D/I332E mutations to enhance ADCC/ADCP against TIM-3+ immunosuppressive cells .

    • H435R mutation to extend serum half-life in primate models .

  • Bispecific formats:

    • TIM-3 x PD-1 bispecific antibodies to target co-expressed checkpoints .

    • Asymmetric Fc engineering to reduce light-chain mispairing .

Critical parameters:

ParameterConsideration
AffinityMaintain KD ≥1 nM to avoid T-cell overactivation
Cross-reactivityValidate against primate TIM-3 orthologs
SolubilityReduce hydrophobic patches in CDR-H3 regions

Source: Structural insights from antibody-antigen co-crystallography .

How should researchers address TIM-3 antibody-dependent cytokine release syndromes (CRS) in preclinical studies?

Mitigation strategies include:

  • Tuning FcγR binding: Use IgG4 isotype or LALA mutations to reduce monocyte activation .

  • Dose escalation protocols: Start at 0.1 mg/kg in NHP studies, monitoring IL-6/IFN-γ levels .

  • Temporal profiling: Single-cell RNA-seq of peripheral blood monocytes at 6/24/48h post-injection .

Data contradiction example:

  • Some studies report CRS with IgG1 formats but not IgG4 . Resolution requires FcγRIIB binding assays and in vivo macrophage depletion experiments.

Methodological Tables

Table 1. Comparison of TIM-3 Antibody Validation Techniques

MethodSensitivitySpecificity ChallengesRecommended Use
Flow cytometryHigh (≥1:1,000)Cross-reactivity with TIM-1/TIM-4Primary screening
IHC (FFPE)ModerateEpitope masking by glycosylationSpatial analysis in tumors
Surface plasmon resonanceUltra-highRequires purified TIM-3 ectodomainAffinity/kinetic measurements

Source: Antibody validation frameworks from structural studies .

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